BLASTX nr result

ID: Coptis21_contig00004627 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00004627
         (1129 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003625575.1| Nuclear transcription factor Y subunit B-3 [...   236   6e-60
ref|XP_003554361.1| PREDICTED: nuclear transcription factor Y su...   233   5e-59
ref|XP_003521372.1| PREDICTED: nuclear transcription factor Y su...   230   6e-58
ref|XP_002322853.1| predicted protein [Populus trichocarpa] gi|2...   230   6e-58
ref|XP_004137802.1| PREDICTED: nuclear transcription factor Y su...   228   2e-57

>ref|XP_003625575.1| Nuclear transcription factor Y subunit B-3 [Medicago truncatula]
           gi|355500590|gb|AES81793.1| Nuclear transcription factor
           Y subunit B-3 [Medicago truncatula]
           gi|388523199|gb|AFK49652.1| nuclear transcription factor
           Y subunit B2 [Medicago truncatula]
          Length = 171

 Score =  236 bits (603), Expect = 6e-60
 Identities = 123/167 (73%), Positives = 132/167 (79%)
 Frame = +3

Query: 360 SHESGEQSPRSNVREQDRYLPIANISRIMKKGLPANGKIAKDAKETVQECVSEFISFITS 539
           SHESGE SPRSN+REQDR+LPIANISRIMKK LPANGKIAKDAKETVQECVSEFISFITS
Sbjct: 12  SHESGEHSPRSNIREQDRFLPIANISRIMKKALPANGKIAKDAKETVQECVSEFISFITS 71

Query: 540 EASDKCQREKRKTINGDDLLWAMATLGFEEYIDPLKVYLSRYREMEXXXXXXXXXXXXRK 719
           EASDKCQREKRKTINGDDLLWAMATLGFE+YIDPLK+YL+RYREME              
Sbjct: 72  EASDKCQREKRKTINGDDLLWAMATLGFEDYIDPLKIYLTRYREMEGDTKGSAKGGDTSG 131

Query: 720 EAAGVQSGQSSQLTHQGSFGQGASYINSPVQGQGQPQHIMLPMQRTE 860
           +   VQ G + QL HQGSF QG SY NS      Q QH+M+PMQ  E
Sbjct: 132 K-KDVQQGSNPQLVHQGSFSQGVSYTNS------QGQHMMVPMQGPE 171


>ref|XP_003554361.1| PREDICTED: nuclear transcription factor Y subunit B-8-like isoform
           2 [Glycine max]
          Length = 171

 Score =  233 bits (595), Expect = 5e-59
 Identities = 123/167 (73%), Positives = 131/167 (78%)
 Frame = +3

Query: 360 SHESGEQSPRSNVREQDRYLPIANISRIMKKGLPANGKIAKDAKETVQECVSEFISFITS 539
           SHESGE SPRSNVREQDRYLPIANISRIMKK LPANGKIAKDAKETVQECVSEFISFITS
Sbjct: 12  SHESGEHSPRSNVREQDRYLPIANISRIMKKALPANGKIAKDAKETVQECVSEFISFITS 71

Query: 540 EASDKCQREKRKTINGDDLLWAMATLGFEEYIDPLKVYLSRYREMEXXXXXXXXXXXXRK 719
           EASDKCQREKRKTINGDDLLWAMATLGFE+YIDPLK+YL+RYREME              
Sbjct: 72  EASDKCQREKRKTINGDDLLWAMATLGFEDYIDPLKIYLTRYREMEGDTKGSAKGGDSSS 131

Query: 720 EAAGVQSGQSSQLTHQGSFGQGASYINSPVQGQGQPQHIMLPMQRTE 860
           +   VQ   ++QL HQGSF QG SY  S      Q QH+M+PMQ  E
Sbjct: 132 K-KDVQPSPNAQLAHQGSFSQGVSYTIS------QGQHMMVPMQGPE 171


>ref|XP_003521372.1| PREDICTED: nuclear transcription factor Y subunit B-8-like [Glycine
           max]
          Length = 171

 Score =  230 bits (586), Expect = 6e-58
 Identities = 120/167 (71%), Positives = 131/167 (78%)
 Frame = +3

Query: 360 SHESGEQSPRSNVREQDRYLPIANISRIMKKGLPANGKIAKDAKETVQECVSEFISFITS 539
           SHESG+ SPRSNVREQDRYLPIANISRIMKK LPANGKIAKDAKETVQECVSEFISFITS
Sbjct: 12  SHESGDHSPRSNVREQDRYLPIANISRIMKKALPANGKIAKDAKETVQECVSEFISFITS 71

Query: 540 EASDKCQREKRKTINGDDLLWAMATLGFEEYIDPLKVYLSRYREMEXXXXXXXXXXXXRK 719
           EASDKCQREKRKTINGDDLLWAMATLGFE+Y+DPLK+YL+RYREME              
Sbjct: 72  EASDKCQREKRKTINGDDLLWAMATLGFEDYMDPLKIYLTRYREMEGDTKGSAKGGDSSA 131

Query: 720 EAAGVQSGQSSQLTHQGSFGQGASYINSPVQGQGQPQHIMLPMQRTE 860
           +   VQ   ++QL HQGSF Q  +Y NS      Q QH+M+PMQ  E
Sbjct: 132 K-RDVQPSPNAQLAHQGSFSQNVTYPNS------QGQHMMVPMQGPE 171


>ref|XP_002322853.1| predicted protein [Populus trichocarpa] gi|222867483|gb|EEF04614.1|
           predicted protein [Populus trichocarpa]
          Length = 176

 Score =  230 bits (586), Expect = 6e-58
 Identities = 121/169 (71%), Positives = 133/169 (78%), Gaps = 2/169 (1%)
 Frame = +3

Query: 360 SHESGEQSPRSN--VREQDRYLPIANISRIMKKGLPANGKIAKDAKETVQECVSEFISFI 533
           SHESG+QSPRSN  VREQDR+LPIANISRIMKK LPANGKIAKDAKETVQECVSEFISFI
Sbjct: 13  SHESGDQSPRSNSNVREQDRFLPIANISRIMKKALPANGKIAKDAKETVQECVSEFISFI 72

Query: 534 TSEASDKCQREKRKTINGDDLLWAMATLGFEEYIDPLKVYLSRYREMEXXXXXXXXXXXX 713
           TSEASDKCQREKRKTINGDDLLWAMATLGFE+YIDPLK+YLSRYREME            
Sbjct: 73  TSEASDKCQREKRKTINGDDLLWAMATLGFEDYIDPLKIYLSRYREMEGDTKGSAKTGDT 132

Query: 714 RKEAAGVQSGQSSQLTHQGSFGQGASYINSPVQGQGQPQHIMLPMQRTE 860
             +   +  G ++Q++HQGSF QG SY NS      Q  H+M+PMQ  E
Sbjct: 133 SAK-KDIHPGPNAQISHQGSFSQGVSYGNS----NSQAPHMMVPMQSNE 176


>ref|XP_004137802.1| PREDICTED: nuclear transcription factor Y subunit B-8-like [Cucumis
           sativus]
          Length = 173

 Score =  228 bits (582), Expect = 2e-57
 Identities = 121/169 (71%), Positives = 132/169 (78%), Gaps = 2/169 (1%)
 Frame = +3

Query: 360 SHESGEQSPRSNVREQDRYLPIANISRIMKKGLPANGKIAKDAKETVQECVSEFISFITS 539
           SHESGEQSPRSNVREQDR+LPIANISRIMKK LPANGKIAKDAKETVQECVSEFISFITS
Sbjct: 12  SHESGEQSPRSNVREQDRFLPIANISRIMKKALPANGKIAKDAKETVQECVSEFISFITS 71

Query: 540 EASDKCQREKRKTINGDDLLWAMATLGFEEYIDPLKVYLSRYREME--XXXXXXXXXXXX 713
           EASDKCQREKRKTINGDDLLWAMATLGFE+YIDPLK YL++YRE E              
Sbjct: 72  EASDKCQREKRKTINGDDLLWAMATLGFEDYIDPLKTYLTKYRETEGDTKGSAKGGDGSA 131

Query: 714 RKEAAGVQSGQSSQLTHQGSFGQGASYINSPVQGQGQPQHIMLPMQRTE 860
           +KEA         Q+ HQGSF QG +Y +S    Q Q QH+M+PMQ T+
Sbjct: 132 KKEA---HPTPIPQMAHQGSFSQGVNYASS----QSQAQHLMVPMQGTD 173


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