BLASTX nr result
ID: Coptis21_contig00004627
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00004627 (1129 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003625575.1| Nuclear transcription factor Y subunit B-3 [... 236 6e-60 ref|XP_003554361.1| PREDICTED: nuclear transcription factor Y su... 233 5e-59 ref|XP_003521372.1| PREDICTED: nuclear transcription factor Y su... 230 6e-58 ref|XP_002322853.1| predicted protein [Populus trichocarpa] gi|2... 230 6e-58 ref|XP_004137802.1| PREDICTED: nuclear transcription factor Y su... 228 2e-57 >ref|XP_003625575.1| Nuclear transcription factor Y subunit B-3 [Medicago truncatula] gi|355500590|gb|AES81793.1| Nuclear transcription factor Y subunit B-3 [Medicago truncatula] gi|388523199|gb|AFK49652.1| nuclear transcription factor Y subunit B2 [Medicago truncatula] Length = 171 Score = 236 bits (603), Expect = 6e-60 Identities = 123/167 (73%), Positives = 132/167 (79%) Frame = +3 Query: 360 SHESGEQSPRSNVREQDRYLPIANISRIMKKGLPANGKIAKDAKETVQECVSEFISFITS 539 SHESGE SPRSN+REQDR+LPIANISRIMKK LPANGKIAKDAKETVQECVSEFISFITS Sbjct: 12 SHESGEHSPRSNIREQDRFLPIANISRIMKKALPANGKIAKDAKETVQECVSEFISFITS 71 Query: 540 EASDKCQREKRKTINGDDLLWAMATLGFEEYIDPLKVYLSRYREMEXXXXXXXXXXXXRK 719 EASDKCQREKRKTINGDDLLWAMATLGFE+YIDPLK+YL+RYREME Sbjct: 72 EASDKCQREKRKTINGDDLLWAMATLGFEDYIDPLKIYLTRYREMEGDTKGSAKGGDTSG 131 Query: 720 EAAGVQSGQSSQLTHQGSFGQGASYINSPVQGQGQPQHIMLPMQRTE 860 + VQ G + QL HQGSF QG SY NS Q QH+M+PMQ E Sbjct: 132 K-KDVQQGSNPQLVHQGSFSQGVSYTNS------QGQHMMVPMQGPE 171 >ref|XP_003554361.1| PREDICTED: nuclear transcription factor Y subunit B-8-like isoform 2 [Glycine max] Length = 171 Score = 233 bits (595), Expect = 5e-59 Identities = 123/167 (73%), Positives = 131/167 (78%) Frame = +3 Query: 360 SHESGEQSPRSNVREQDRYLPIANISRIMKKGLPANGKIAKDAKETVQECVSEFISFITS 539 SHESGE SPRSNVREQDRYLPIANISRIMKK LPANGKIAKDAKETVQECVSEFISFITS Sbjct: 12 SHESGEHSPRSNVREQDRYLPIANISRIMKKALPANGKIAKDAKETVQECVSEFISFITS 71 Query: 540 EASDKCQREKRKTINGDDLLWAMATLGFEEYIDPLKVYLSRYREMEXXXXXXXXXXXXRK 719 EASDKCQREKRKTINGDDLLWAMATLGFE+YIDPLK+YL+RYREME Sbjct: 72 EASDKCQREKRKTINGDDLLWAMATLGFEDYIDPLKIYLTRYREMEGDTKGSAKGGDSSS 131 Query: 720 EAAGVQSGQSSQLTHQGSFGQGASYINSPVQGQGQPQHIMLPMQRTE 860 + VQ ++QL HQGSF QG SY S Q QH+M+PMQ E Sbjct: 132 K-KDVQPSPNAQLAHQGSFSQGVSYTIS------QGQHMMVPMQGPE 171 >ref|XP_003521372.1| PREDICTED: nuclear transcription factor Y subunit B-8-like [Glycine max] Length = 171 Score = 230 bits (586), Expect = 6e-58 Identities = 120/167 (71%), Positives = 131/167 (78%) Frame = +3 Query: 360 SHESGEQSPRSNVREQDRYLPIANISRIMKKGLPANGKIAKDAKETVQECVSEFISFITS 539 SHESG+ SPRSNVREQDRYLPIANISRIMKK LPANGKIAKDAKETVQECVSEFISFITS Sbjct: 12 SHESGDHSPRSNVREQDRYLPIANISRIMKKALPANGKIAKDAKETVQECVSEFISFITS 71 Query: 540 EASDKCQREKRKTINGDDLLWAMATLGFEEYIDPLKVYLSRYREMEXXXXXXXXXXXXRK 719 EASDKCQREKRKTINGDDLLWAMATLGFE+Y+DPLK+YL+RYREME Sbjct: 72 EASDKCQREKRKTINGDDLLWAMATLGFEDYMDPLKIYLTRYREMEGDTKGSAKGGDSSA 131 Query: 720 EAAGVQSGQSSQLTHQGSFGQGASYINSPVQGQGQPQHIMLPMQRTE 860 + VQ ++QL HQGSF Q +Y NS Q QH+M+PMQ E Sbjct: 132 K-RDVQPSPNAQLAHQGSFSQNVTYPNS------QGQHMMVPMQGPE 171 >ref|XP_002322853.1| predicted protein [Populus trichocarpa] gi|222867483|gb|EEF04614.1| predicted protein [Populus trichocarpa] Length = 176 Score = 230 bits (586), Expect = 6e-58 Identities = 121/169 (71%), Positives = 133/169 (78%), Gaps = 2/169 (1%) Frame = +3 Query: 360 SHESGEQSPRSN--VREQDRYLPIANISRIMKKGLPANGKIAKDAKETVQECVSEFISFI 533 SHESG+QSPRSN VREQDR+LPIANISRIMKK LPANGKIAKDAKETVQECVSEFISFI Sbjct: 13 SHESGDQSPRSNSNVREQDRFLPIANISRIMKKALPANGKIAKDAKETVQECVSEFISFI 72 Query: 534 TSEASDKCQREKRKTINGDDLLWAMATLGFEEYIDPLKVYLSRYREMEXXXXXXXXXXXX 713 TSEASDKCQREKRKTINGDDLLWAMATLGFE+YIDPLK+YLSRYREME Sbjct: 73 TSEASDKCQREKRKTINGDDLLWAMATLGFEDYIDPLKIYLSRYREMEGDTKGSAKTGDT 132 Query: 714 RKEAAGVQSGQSSQLTHQGSFGQGASYINSPVQGQGQPQHIMLPMQRTE 860 + + G ++Q++HQGSF QG SY NS Q H+M+PMQ E Sbjct: 133 SAK-KDIHPGPNAQISHQGSFSQGVSYGNS----NSQAPHMMVPMQSNE 176 >ref|XP_004137802.1| PREDICTED: nuclear transcription factor Y subunit B-8-like [Cucumis sativus] Length = 173 Score = 228 bits (582), Expect = 2e-57 Identities = 121/169 (71%), Positives = 132/169 (78%), Gaps = 2/169 (1%) Frame = +3 Query: 360 SHESGEQSPRSNVREQDRYLPIANISRIMKKGLPANGKIAKDAKETVQECVSEFISFITS 539 SHESGEQSPRSNVREQDR+LPIANISRIMKK LPANGKIAKDAKETVQECVSEFISFITS Sbjct: 12 SHESGEQSPRSNVREQDRFLPIANISRIMKKALPANGKIAKDAKETVQECVSEFISFITS 71 Query: 540 EASDKCQREKRKTINGDDLLWAMATLGFEEYIDPLKVYLSRYREME--XXXXXXXXXXXX 713 EASDKCQREKRKTINGDDLLWAMATLGFE+YIDPLK YL++YRE E Sbjct: 72 EASDKCQREKRKTINGDDLLWAMATLGFEDYIDPLKTYLTKYRETEGDTKGSAKGGDGSA 131 Query: 714 RKEAAGVQSGQSSQLTHQGSFGQGASYINSPVQGQGQPQHIMLPMQRTE 860 +KEA Q+ HQGSF QG +Y +S Q Q QH+M+PMQ T+ Sbjct: 132 KKEA---HPTPIPQMAHQGSFSQGVNYASS----QSQAQHLMVPMQGTD 173