BLASTX nr result

ID: Coptis21_contig00004622 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00004622
         (272 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003520091.1| PREDICTED: DUF246 domain-containing protein ...   152   2e-35
ref|XP_003613885.1| DUF246 domain-containing protein [Medicago t...   152   4e-35
ref|XP_003529471.1| PREDICTED: DUF246 domain-containing protein ...   149   2e-34
ref|XP_003516276.1| PREDICTED: DUF246 domain-containing protein ...   149   2e-34
ref|XP_002265858.1| PREDICTED: DUF246 domain-containing protein ...   149   3e-34

>ref|XP_003520091.1| PREDICTED: DUF246 domain-containing protein At1g04910-like [Glycine
           max]
          Length = 506

 Score =  152 bits (385), Expect = 2e-35
 Identities = 74/90 (82%), Positives = 80/90 (88%)
 Frame = -3

Query: 270 AAICDMVTVARFLNLTMVVPELDKRSFWADPSNFGDIFDVDHFIGSLRDEVRIIKRLPKK 91
           AAICDMVTVARFLNLT+VVPELDK SFWADPSNF DIFDV HFI SLRDEVRI+KR+PKK
Sbjct: 112 AAICDMVTVARFLNLTLVVPELDKTSFWADPSNFEDIFDVKHFIDSLRDEVRIVKRVPKK 171

Query: 90  VSRKLEDLSLEMPPVSWSNEKYYLQQVLPL 1
            S K    +LEMPPVSWSNEKYYL+Q+LPL
Sbjct: 172 FSSKHGFSTLEMPPVSWSNEKYYLEQILPL 201


>ref|XP_003613885.1| DUF246 domain-containing protein [Medicago truncatula]
           gi|355515220|gb|AES96843.1| DUF246 domain-containing
           protein [Medicago truncatula]
          Length = 494

 Score =  152 bits (383), Expect = 4e-35
 Identities = 72/90 (80%), Positives = 80/90 (88%)
 Frame = -3

Query: 270 AAICDMVTVARFLNLTMVVPELDKRSFWADPSNFGDIFDVDHFIGSLRDEVRIIKRLPKK 91
           AAICDMVT+ARFLNLT+VVPELDK SFWADPSNF DIFDV HFI SLRDEVRI+KR+PKK
Sbjct: 102 AAICDMVTIARFLNLTLVVPELDKTSFWADPSNFEDIFDVKHFIDSLRDEVRIVKRVPKK 161

Query: 90  VSRKLEDLSLEMPPVSWSNEKYYLQQVLPL 1
            + K    +LEMPPVSWSNEKYYL+Q+LPL
Sbjct: 162 FNSKYGYSTLEMPPVSWSNEKYYLEQILPL 191


>ref|XP_003529471.1| PREDICTED: DUF246 domain-containing protein At1g04910-like [Glycine
           max]
          Length = 499

 Score =  149 bits (377), Expect = 2e-34
 Identities = 71/90 (78%), Positives = 81/90 (90%)
 Frame = -3

Query: 270 AAICDMVTVARFLNLTMVVPELDKRSFWADPSNFGDIFDVDHFIGSLRDEVRIIKRLPKK 91
           AAICDMVTVAR LNLT+VVPELDK+SFWADPSNF DIFDV HFI SL+DEVRI+KR+PK+
Sbjct: 106 AAICDMVTVARLLNLTLVVPELDKKSFWADPSNFEDIFDVRHFIDSLQDEVRIVKRVPKR 165

Query: 90  VSRKLEDLSLEMPPVSWSNEKYYLQQVLPL 1
            SRK    +L+MPPVSWSNEKYYL+Q+LPL
Sbjct: 166 FSRKSGYSTLKMPPVSWSNEKYYLEQILPL 195


>ref|XP_003516276.1| PREDICTED: DUF246 domain-containing protein At1g04910-like [Glycine
           max]
          Length = 506

 Score =  149 bits (376), Expect = 2e-34
 Identities = 73/90 (81%), Positives = 79/90 (87%)
 Frame = -3

Query: 270 AAICDMVTVARFLNLTMVVPELDKRSFWADPSNFGDIFDVDHFIGSLRDEVRIIKRLPKK 91
           AAICDMVTVARFLNLT+VVPELDK SFWADPSNF DIFDV HFI SLRDEVRI+KR+PKK
Sbjct: 112 AAICDMVTVARFLNLTLVVPELDKTSFWADPSNFEDIFDVKHFIYSLRDEVRIVKRVPKK 171

Query: 90  VSRKLEDLSLEMPPVSWSNEKYYLQQVLPL 1
            S K    +LEMPPVSWSNE YYL+Q+LPL
Sbjct: 172 FSSKHGYATLEMPPVSWSNEIYYLEQILPL 201


>ref|XP_002265858.1| PREDICTED: DUF246 domain-containing protein At1g04910 [Vitis
           vinifera] gi|296087792|emb|CBI35048.3| unnamed protein
           product [Vitis vinifera]
          Length = 504

 Score =  149 bits (375), Expect = 3e-34
 Identities = 72/90 (80%), Positives = 78/90 (86%)
 Frame = -3

Query: 270 AAICDMVTVARFLNLTMVVPELDKRSFWADPSNFGDIFDVDHFIGSLRDEVRIIKRLPKK 91
           AAICDMVTVARFLNLT+VVPELDK SFW+DPSNF DIFDV HFI SLRDEVRI+KRLPK+
Sbjct: 111 AAICDMVTVARFLNLTLVVPELDKTSFWSDPSNFEDIFDVRHFIESLRDEVRIVKRLPKR 170

Query: 90  VSRKLEDLSLEMPPVSWSNEKYYLQQVLPL 1
            SRK     L MPPVSWSNEKYY +Q+LPL
Sbjct: 171 FSRKYGYKQLAMPPVSWSNEKYYSEQILPL 200


Top