BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00004619
         (834 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002515715.1| translation elongation factor, putative [Ric...   358   6e-97
ref|XP_004139777.1| PREDICTED: ribosome assembly protein 1-like ...   348   9e-94
ref|XP_004139776.1| PREDICTED: ribosome assembly protein 1-like ...   348   9e-94
ref|XP_003553334.1| PREDICTED: elongation factor Tu GTP-binding ...   348   9e-94
ref|XP_002265210.1| PREDICTED: elongation factor Tu GTP-binding ...   347   2e-93

>ref|XP_002515715.1| translation elongation factor, putative [Ricinus communis]
            gi|223545152|gb|EEF46662.1| translation elongation
            factor, putative [Ricinus communis]
          Length = 1028

 Score =  358 bits (920), Expect = 6e-97
 Identities = 178/228 (78%), Positives = 194/228 (85%)
 Frame = +1

Query: 4    LHMEAKSLQNSVVSGFQLATAAGPLCDEPMWGLAFLVEAYISPLGGSTDESEPFTHRSDQ 183
            L MEA+SLQNS+VSGFQLATAAGPLCDEPMWG+AF+VEAY+SPL    DESE    +S+Q
Sbjct: 802  LQMEAESLQNSLVSGFQLATAAGPLCDEPMWGVAFVVEAYVSPLAEQADESES-NQQSEQ 860

Query: 184  HGIFTGQIMTAVKDACRQAVLQKKPRLVEGVYFCELNTTTEYLGAMYXXXXXXXXXXXKE 363
            +G+FTGQ+M AVKDACR AVLQ KPRLVE +YFCELNT TE+LG MY           KE
Sbjct: 861  YGMFTGQVMAAVKDACRAAVLQNKPRLVEAMYFCELNTPTEFLGPMYAVLNRRRARVLKE 920

Query: 364  EMQEGSSLFTVHAYVPVAESFGFADELRRWTSGACSALLLFSHWETLEEDPFFVPKTEEE 543
            EMQEGS LFTVHAYVPV+ESFGF DELRRWTSGA SALL+ SHWE L EDPFFVPKTEEE
Sbjct: 921  EMQEGSPLFTVHAYVPVSESFGFPDELRRWTSGAASALLVLSHWEALPEDPFFVPKTEEE 980

Query: 544  IEEFGDGSSVLPNTARKLVDAVRRRKGLPVEEKVVQHGAKQRTLARKV 687
            IEEFGDGSSVLPNT+RKL+DAVRRRKGLPVEEKVVQH  KQRTLARKV
Sbjct: 981  IEEFGDGSSVLPNTSRKLIDAVRRRKGLPVEEKVVQHATKQRTLARKV 1028


>ref|XP_004139777.1| PREDICTED: ribosome assembly protein 1-like isoform 2 [Cucumis
            sativus] gi|449502885|ref|XP_004161770.1| PREDICTED:
            ribosome assembly protein 1-like [Cucumis sativus]
          Length = 1019

 Score =  348 bits (893), Expect = 9e-94
 Identities = 175/227 (77%), Positives = 192/227 (84%), Gaps = 1/227 (0%)
 Frame = +1

Query: 10   MEAKSLQNSVVSGFQLATAAGPLCDEPMWGLAFLVEAYISPLGGSTDESE-PFTHRSDQH 186
            MEA SL+NSV+SGFQLAT+AGPLCDEPMWGLAF+V+  IS L G++DESE PF  + D +
Sbjct: 795  MEAASLENSVLSGFQLATSAGPLCDEPMWGLAFIVDVSISSLSGNSDESESPF--QPDNN 852

Query: 187  GIFTGQIMTAVKDACRQAVLQKKPRLVEGVYFCELNTTTEYLGAMYXXXXXXXXXXXKEE 366
             IF+GQ+MT VKDACR AVLQKKPRLVE +YFCELNT TEYLG MY           KEE
Sbjct: 853  AIFSGQVMTTVKDACRAAVLQKKPRLVEAMYFCELNTPTEYLGPMYAVLARRRARVLKEE 912

Query: 367  MQEGSSLFTVHAYVPVAESFGFADELRRWTSGACSALLLFSHWETLEEDPFFVPKTEEEI 546
            MQEGS LFTVHAYVPV+ESFGFADELRRWTSGA SALL+ SHWE L EDPFF+PKTEEE+
Sbjct: 913  MQEGSPLFTVHAYVPVSESFGFADELRRWTSGAASALLVLSHWEELCEDPFFIPKTEEEL 972

Query: 547  EEFGDGSSVLPNTARKLVDAVRRRKGLPVEEKVVQHGAKQRTLARKV 687
            EEFGDGSSVLPNTARKL+D VRRRKGLPVEEKVVQH  KQRTLARKV
Sbjct: 973  EEFGDGSSVLPNTARKLIDTVRRRKGLPVEEKVVQHATKQRTLARKV 1019


>ref|XP_004139776.1| PREDICTED: ribosome assembly protein 1-like isoform 1 [Cucumis
            sativus]
          Length = 1035

 Score =  348 bits (893), Expect = 9e-94
 Identities = 175/227 (77%), Positives = 192/227 (84%), Gaps = 1/227 (0%)
 Frame = +1

Query: 10   MEAKSLQNSVVSGFQLATAAGPLCDEPMWGLAFLVEAYISPLGGSTDESE-PFTHRSDQH 186
            MEA SL+NSV+SGFQLAT+AGPLCDEPMWGLAF+V+  IS L G++DESE PF  + D +
Sbjct: 811  MEAASLENSVLSGFQLATSAGPLCDEPMWGLAFIVDVSISSLSGNSDESESPF--QPDNN 868

Query: 187  GIFTGQIMTAVKDACRQAVLQKKPRLVEGVYFCELNTTTEYLGAMYXXXXXXXXXXXKEE 366
             IF+GQ+MT VKDACR AVLQKKPRLVE +YFCELNT TEYLG MY           KEE
Sbjct: 869  AIFSGQVMTTVKDACRAAVLQKKPRLVEAMYFCELNTPTEYLGPMYAVLARRRARVLKEE 928

Query: 367  MQEGSSLFTVHAYVPVAESFGFADELRRWTSGACSALLLFSHWETLEEDPFFVPKTEEEI 546
            MQEGS LFTVHAYVPV+ESFGFADELRRWTSGA SALL+ SHWE L EDPFF+PKTEEE+
Sbjct: 929  MQEGSPLFTVHAYVPVSESFGFADELRRWTSGAASALLVLSHWEELCEDPFFIPKTEEEL 988

Query: 547  EEFGDGSSVLPNTARKLVDAVRRRKGLPVEEKVVQHGAKQRTLARKV 687
            EEFGDGSSVLPNTARKL+D VRRRKGLPVEEKVVQH  KQRTLARKV
Sbjct: 989  EEFGDGSSVLPNTARKLIDTVRRRKGLPVEEKVVQHATKQRTLARKV 1035


>ref|XP_003553334.1| PREDICTED: elongation factor Tu GTP-binding domain-containing protein
            1-like [Glycine max]
          Length = 1022

 Score =  348 bits (893), Expect = 9e-94
 Identities = 173/230 (75%), Positives = 195/230 (84%), Gaps = 1/230 (0%)
 Frame = +1

Query: 1    SLHMEAKSLQNSVVSGFQLATAAGPLCDEPMWGLAFLVEAYISPLGGSTDESEPFTHR-S 177
            +L+M+A+ L++SV+SGFQLAT+AGPLCDEPMWGLAF+VEA +SP  G  DESE  TH+ S
Sbjct: 795  ALYMDAEHLESSVISGFQLATSAGPLCDEPMWGLAFVVEARLSPFPGQHDESE--THQQS 852

Query: 178  DQHGIFTGQIMTAVKDACRQAVLQKKPRLVEGVYFCELNTTTEYLGAMYXXXXXXXXXXX 357
            +Q+GIF GQ++  VKDACR AV+Q KPRLVE +YFCELNT TEYLG MY           
Sbjct: 853  EQYGIFAGQVIATVKDACRAAVVQNKPRLVEAMYFCELNTPTEYLGPMYAVLSRRRARVL 912

Query: 358  KEEMQEGSSLFTVHAYVPVAESFGFADELRRWTSGACSALLLFSHWETLEEDPFFVPKTE 537
            KEEMQEGS  FTVHAY+PV+ESFGFADELRRWTSGA SALL+ SHWE L EDPFFVPKTE
Sbjct: 913  KEEMQEGSPFFTVHAYLPVSESFGFADELRRWTSGAASALLVLSHWEALPEDPFFVPKTE 972

Query: 538  EEIEEFGDGSSVLPNTARKLVDAVRRRKGLPVEEKVVQHGAKQRTLARKV 687
            EEIEEFGDGSSVLPNTARKL++AVRRRKGLPVEEKVVQHG KQRTLARKV
Sbjct: 973  EEIEEFGDGSSVLPNTARKLINAVRRRKGLPVEEKVVQHGTKQRTLARKV 1022


>ref|XP_002265210.1| PREDICTED: elongation factor Tu GTP-binding domain-containing protein
            1-like isoform 1 [Vitis vinifera]
          Length = 1060

 Score =  347 bits (889), Expect = 2e-93
 Identities = 175/230 (76%), Positives = 193/230 (83%), Gaps = 1/230 (0%)
 Frame = +1

Query: 1    SLHMEAKSLQNSVVSGFQLATAAGPLCDEPMWGLAFLVEAYISPLGGS-TDESEPFTHRS 177
            +L MEA+SL++SV+SGFQLATAAGPLC+EPMWGLAF++EA ISPL G  +D+ E      
Sbjct: 831  ALCMEAESLESSVISGFQLATAAGPLCEEPMWGLAFVIEARISPLEGQQSDDLETSYQPL 890

Query: 178  DQHGIFTGQIMTAVKDACRQAVLQKKPRLVEGVYFCELNTTTEYLGAMYXXXXXXXXXXX 357
            +Q+GIFTGQ+M  VKDACR AVLQKKPRLVE +YFCELNT TEYLG MY           
Sbjct: 891  EQYGIFTGQVMNTVKDACRTAVLQKKPRLVEAMYFCELNTPTEYLGPMYAVLARRRARVL 950

Query: 358  KEEMQEGSSLFTVHAYVPVAESFGFADELRRWTSGACSALLLFSHWETLEEDPFFVPKTE 537
            KEEMQEGSSLFTVHAYVPV+ESFGF DELRRWTSGA SALL+ SHWE L EDPFFVPKTE
Sbjct: 951  KEEMQEGSSLFTVHAYVPVSESFGFPDELRRWTSGASSALLVLSHWEALPEDPFFVPKTE 1010

Query: 538  EEIEEFGDGSSVLPNTARKLVDAVRRRKGLPVEEKVVQHGAKQRTLARKV 687
            EEIEEFGDGSSVL NTARKL+DAVRR+KGLPVEEKVVQH  KQRTLARKV
Sbjct: 1011 EEIEEFGDGSSVLHNTARKLIDAVRRQKGLPVEEKVVQHATKQRTLARKV 1060