BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00004617
         (1939 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280127.1| PREDICTED: tRNA (adenine-N(1)-)-methyltransf...   471   e-130
ref|XP_003549460.1| PREDICTED: tRNA (adenine-N(1)-)-methyltransf...   456   e-125
ref|XP_003589467.1| tRNA (adenine-N(1)-)-methyltransferase non-c...   436   e-120
ref|XP_002510522.1| translation initiation factor, putative [Ric...   405   e-110
ref|XP_003580561.1| PREDICTED: tRNA (adenine-N(1)-)-methyltransf...   402   e-109

>ref|XP_002280127.1| PREDICTED: tRNA (adenine-N(1)-)-methyltransferase non-catalytic
            subunit trm6 [Vitis vinifera]
            gi|302142647|emb|CBI19850.3| unnamed protein product
            [Vitis vinifera]
          Length = 464

 Score =  471 bits (1211), Expect = e-130
 Identities = 242/387 (62%), Positives = 284/387 (73%)
 Frame = -3

Query: 1634 EVEIKEESRDNRALVDNNSAQSLSGQDIDALRRQGATGDQIVEALIANSSTFEKKTLFSQ 1455
            + ++K+E +DNRA+VDNN AQSL+G+DID +RRQGATGD+IVEALI+NS+T+EKKT FSQ
Sbjct: 93   DCQLKDEPKDNRAIVDNNKAQSLTGEDIDEMRRQGATGDEIVEALISNSATYEKKTSFSQ 152

Query: 1454 EKYRIRKQKKYAPRVLLRRPFARSICEAYFKKYPARIGYLRMDTLSLLLSMANVSPYSDV 1275
            EKYR++KQKKY+PRVLLRRPF RSICEAYFKKYPARIG+LR+DTLSLLLSMAN++ +SDV
Sbjct: 153  EKYRLKKQKKYSPRVLLRRPFCRSICEAYFKKYPARIGFLRVDTLSLLLSMANIAAHSDV 212

Query: 1274 LVVDMVGGILTGAVAERLGGTGYVCNTYFGVTQYPMDIVRXXXXXXXICSSIVRSPFSDL 1095
            LVVDMVGG+LTGAVAERLGGTGYVCN Y G T YPMDIVR       IC  IVRSP   L
Sbjct: 213  LVVDMVGGLLTGAVAERLGGTGYVCNAYLGDTPYPMDIVRIFNFSSEICKRIVRSPVDGL 272

Query: 1094 CLAASNNVEHFGXXXXXXXXXXXNGDESSSPPLFKLEAVVIQNQVSSPSCLHSVSNAHPS 915
                    E F            + ++ SS   F                 HS+S    +
Sbjct: 273  RSIQDGTSEQFFQHKGVSNSEIQSNEQMSSQDSFP----------------HSISTEETT 316

Query: 914  FLSGNENLGPAPTTFMDDTDSSSVSRVHKPTKSGEKATQEVINLWKANGFSSLIIAAPEL 735
              S N  L   P   M       V++  K TK+GE A+ + INLWK NGFSSL+IAAPEL
Sbjct: 317  LSSENGMLDLIPQ--MVTASPPQVAKTCKATKAGENASLDAINLWKENGFSSLLIAAPEL 374

Query: 734  DTWSTLQDLLPLLSYSAPFAVYHQYLQPLTTCMHNLQVAKLAIGLQISEPWLREYQVLPS 555
            D WS +Q+ LP LSYSA FA+YHQYLQPL TCMHNLQ+ K+AIGLQISEPWLREYQVLPS
Sbjct: 375  DVWSIVQEFLPFLSYSASFAIYHQYLQPLATCMHNLQLGKMAIGLQISEPWLREYQVLPS 434

Query: 554  RTHPCMQMSAFGGYILSGIKICSTEAQ 474
            RTHPCMQMSAFGGYILSG +ICS+++Q
Sbjct: 435  RTHPCMQMSAFGGYILSGTRICSSDSQ 461


>ref|XP_003549460.1| PREDICTED: tRNA (adenine-N(1)-)-methyltransferase non-catalytic
            subunit trm6-like [Glycine max]
          Length = 440

 Score =  456 bits (1172), Expect = e-125
 Identities = 238/381 (62%), Positives = 290/381 (76%), Gaps = 2/381 (0%)
 Frame = -3

Query: 1616 ESRDNRALVDNNSAQSLSGQDIDALRRQGATGDQIVEALIANSSTFEKKTLFSQEKYRIR 1437
            +SRDNRALVDNN+AQSL+G+DI+A+RRQGA G++I+EALIANS+TFEKKT FSQEKYR++
Sbjct: 91   DSRDNRALVDNNTAQSLTGEDIEAMRRQGAGGNEIIEALIANSATFEKKTSFSQEKYRLK 150

Query: 1436 KQKKYAPRVLLRRPFARSICEAYFKKYPARIGYLRMDTLSLLLSMANVSPYSDVLVVDMV 1257
            KQKKYAP+VL+RRP ARSICEAYFKKYP++IG+LR+DTLSLLLSM NVS  SD+LVVDMV
Sbjct: 151  KQKKYAPKVLMRRPVARSICEAYFKKYPSKIGFLRVDTLSLLLSMGNVSSNSDILVVDMV 210

Query: 1256 GGILTGAVAERLGGTGYVCNTYFGVTQYPMDIVRXXXXXXXICSSIVRSPFSDLCLAASN 1077
            GG+LTGAVAERLGGTG+VCN+Y G   Y MDIVR       IC  IVRSP SDL L+   
Sbjct: 211  GGLLTGAVAERLGGTGFVCNSYIGQAPYSMDIVRIFNLSDEICKRIVRSPISDL-LSQKE 269

Query: 1076 NVEHFGXXXXXXXXXXXNGDESSSPPLFKLEAVVIQNQVSSPSCLHSVSNAHPSFLS--G 903
            + E                 ++  P         +Q+Q+S+ + +  +S++  + +S  G
Sbjct: 270  SPE-----------------QTLQPDDACNVESHVQDQISASTSMEDISHSSENGISDLG 312

Query: 902  NENLGPAPTTFMDDTDSSSVSRVHKPTKSGEKATQEVINLWKANGFSSLIIAAPELDTWS 723
             EN  PA               V K  K+GE+A +E+I+LWK NGFSSLIIAAPELDTW+
Sbjct: 313  AENTEPA-------------KEVWKAPKAGERAQKEIIDLWKENGFSSLIIAAPELDTWT 359

Query: 722  TLQDLLPLLSYSAPFAVYHQYLQPLTTCMHNLQVAKLAIGLQISEPWLREYQVLPSRTHP 543
             ++D+LPLL+ SAPFA+YHQYLQPL TCMHNLQ+ K+AIGLQI+EPWLREYQVLPSRTHP
Sbjct: 360  LVRDILPLLADSAPFAIYHQYLQPLATCMHNLQLEKMAIGLQITEPWLREYQVLPSRTHP 419

Query: 542  CMQMSAFGGYILSGIKICSTE 480
            CMQMS+FGGYILSG KICSTE
Sbjct: 420  CMQMSSFGGYILSGTKICSTE 440


>ref|XP_003589467.1| tRNA (adenine-N(1)-)-methyltransferase non-catalytic subunit trm6
            [Medicago truncatula] gi|355478515|gb|AES59718.1| tRNA
            (adenine-N(1)-)-methyltransferase non-catalytic subunit
            trm6 [Medicago truncatula]
          Length = 457

 Score =  436 bits (1122), Expect = e-120
 Identities = 234/394 (59%), Positives = 288/394 (73%), Gaps = 6/394 (1%)
 Frame = -3

Query: 1646 EGKSEVEIKE-----ESRDNRALVDNNSAQSLSGQDIDALRRQGATGDQIVEALIANSST 1482
            +G+ + E K+     E RDNR+L+DNN+AQSL+G+DI+ +RRQGA GD+I+EALIANS+T
Sbjct: 89   DGRFQAESKDGPLTGELRDNRSLIDNNTAQSLTGEDIEDMRRQGAKGDEIIEALIANSAT 148

Query: 1481 FEKKTLFSQEKYRIRKQKKYAPRVLLRRPFARSICEAYFKKYPARIGYLRMDTLSLLLSM 1302
            F+KKT FSQEKYR++KQKKYAP+VL+RRP ARSICEAYF K+P +IG+LR+DTLSLLLSM
Sbjct: 149  FDKKTSFSQEKYRLKKQKKYAPKVLIRRPVARSICEAYFMKHPLKIGFLRVDTLSLLLSM 208

Query: 1301 ANVSPYSDVLVVDMVGGILTGAVAERLGGTGYVCNTYFGVTQYPMDIVRXXXXXXXICSS 1122
            ANVS  SD+LVVDMVGG+LTGAVAERLGGTG+VCN+Y G     MDIVR       IC  
Sbjct: 209  ANVSSNSDILVVDMVGGLLTGAVAERLGGTGFVCNSYLGKAP-SMDIVRIFNLSDEICKR 267

Query: 1121 IVRSPFSDLCLAASNNVEHFGXXXXXXXXXXXNGDESSSPPLFKLEAVVIQNQVSSPSCL 942
            IVRS  SDL                          + SS    K +   +++Q+++  C 
Sbjct: 268  IVRSSISDL-----------------------LSQKESSQQNPKHDDGSVESQLNNQMCA 304

Query: 941  H-SVSNAHPSFLSGNENLGPAPTTFMDDTDSSSVSRVHKPTKSGEKATQEVINLWKANGF 765
              S+     S  +G  +LG A      ++ +    R  K  K+GEKA+QE+I+ WK NGF
Sbjct: 305  SVSMEEISHSSENGISDLG-ADNAENIESSTFPALRACKAIKAGEKASQEIIDSWKENGF 363

Query: 764  SSLIIAAPELDTWSTLQDLLPLLSYSAPFAVYHQYLQPLTTCMHNLQVAKLAIGLQISEP 585
            SSLIIAAP+LDTW+ ++DLLPLLS SAPFA+YHQYLQPL TCMHNLQ+ K+AIGLQI+EP
Sbjct: 364  SSLIIAAPDLDTWTLIKDLLPLLSNSAPFAIYHQYLQPLATCMHNLQLEKMAIGLQITEP 423

Query: 584  WLREYQVLPSRTHPCMQMSAFGGYILSGIKICST 483
            WLREYQVLPSRTHPCMQMSAFGGYILSG KICS+
Sbjct: 424  WLREYQVLPSRTHPCMQMSAFGGYILSGTKICSS 457


>ref|XP_002510522.1| translation initiation factor, putative [Ricinus communis]
            gi|223551223|gb|EEF52709.1| translation initiation
            factor, putative [Ricinus communis]
          Length = 514

 Score =  405 bits (1040), Expect = e-110
 Identities = 217/378 (57%), Positives = 261/378 (69%)
 Frame = -3

Query: 1646 EGKSEVEIKEESRDNRALVDNNSAQSLSGQDIDALRRQGATGDQIVEALIANSSTFEKKT 1467
            E K + EI EES+DNRA++DNN AQ+L+G+DID +RRQGA GD+I+EALIANS+TFEKKT
Sbjct: 89   EEKGDCEIIEESKDNRAILDNNLAQTLTGEDIDEMRRQGAKGDEIIEALIANSTTFEKKT 148

Query: 1466 LFSQEKYRIRKQKKYAPRVLLRRPFARSICEAYFKKYPARIGYLRMDTLSLLLSMANVSP 1287
             FSQEKYRI+KQKKYAPRVLLRRPF RSICEAYFKKYPARIG+LR+D LSLLLSMANV+ 
Sbjct: 149  SFSQEKYRIKKQKKYAPRVLLRRPFTRSICEAYFKKYPARIGFLRVDALSLLLSMANVTA 208

Query: 1286 YSDVLVVDMVGGILTGAVAERLGGTGYVCNTYFGVTQYPMDIVRXXXXXXXICSSIVRSP 1107
             SDVLVVDMVGG+LTGA+AERLGGTGYVCNTY G T Y  DIVR        C  IVR+ 
Sbjct: 209  NSDVLVVDMVGGLLTGAIAERLGGTGYVCNTYLGGTPYSTDIVRMFNFNNDACKRIVRAS 268

Query: 1106 FSDLCLAASNNVEHFGXXXXXXXXXXXNGDESSSPPLFKLEAVVIQNQVSSPSCLHSVSN 927
             +DL                            +S P+   E          PS   +  N
Sbjct: 269  LNDL--------------------------SGTSKPMSSHE--------DGPSVEANDQN 294

Query: 926  AHPSFLSGNENLGPAPTTFMDDTDSSSVSRVHKPTKSGEKATQEVINLWKANGFSSLIIA 747
            +  S     E+          D  +S +S++ K  K+GE+A++E + LWK NGFSSLIIA
Sbjct: 295  SSISMEEIPESSENQVADLDHDATASPISKMSKAPKAGERASEEALKLWKENGFSSLIIA 354

Query: 746  APELDTWSTLQDLLPLLSYSAPFAVYHQYLQPLTTCMHNLQVAKLAIGLQISEPWLREYQ 567
            AP+LD WS ++ LLPLLSYSAPFA++HQYLQPL TCMHNLQ+ K+AIGLQISEPWLREYQ
Sbjct: 355  APDLDAWSLVKVLLPLLSYSAPFAIFHQYLQPLATCMHNLQLGKMAIGLQISEPWLREYQ 414

Query: 566  VLPSRTHPCMQMSAFGGY 513
            +       C  ++ FGG+
Sbjct: 415  L----GFFCSCLAGFGGF 428


>ref|XP_003580561.1| PREDICTED: tRNA (adenine-N(1)-)-methyltransferase non-catalytic
            subunit trm6-like [Brachypodium distachyon]
          Length = 475

 Score =  402 bits (1034), Expect = e-109
 Identities = 212/381 (55%), Positives = 265/381 (69%), Gaps = 2/381 (0%)
 Frame = -3

Query: 1628 EIKEESRDNRALVDNNSAQSLSGQDIDALRRQGATGDQIVEALIANSSTFEKKTLFSQEK 1449
            ++++E+RDNR+LVDNN+AQ+LS +DI+A++R GA+GD IVEALIANSSTF  KT+FSQEK
Sbjct: 89   QVQDETRDNRSLVDNNTAQNLSSEDIEAMKRDGASGDAIVEALIANSSTFGNKTVFSQEK 148

Query: 1448 YRIRKQKKYAPRVLLRRPFARSICEAYFKKYPARIGYLRMDTLSLLLSMANVSPYSDVLV 1269
            Y+++KQKKYAP+VLLRRP  RSICE YFKKYPARIG++R+D LSLLLSMANV  YSDVLV
Sbjct: 149  YKLKKQKKYAPKVLLRRPSTRSICETYFKKYPARIGFMRVDALSLLLSMANVGAYSDVLV 208

Query: 1268 VDMVGGILTGAVAERLGGTGYVCNTYFGVTQYPMDIVRXXXXXXXICSSIVRSPFSDLCL 1089
            VD+VGG++ GAVAERLGGTGYVCNTY G     +DI+R       + S I ++  SD+C 
Sbjct: 209  VDIVGGLVVGAVAERLGGTGYVCNTYLGSAPSNIDIIRMYNLSSDMNSRIFQASLSDVCS 268

Query: 1088 AASNNVEHFGXXXXXXXXXXXNGDESSSPPL-FKLEAVVIQNQVSSPSCLH-SVSNAHPS 915
              ++     G             DES    L   ++A V      S       +    PS
Sbjct: 269  LQNSGTVLNGNIQGEVVEPSAVSDESPQSSLALPVDAAVSDGNAQSTGVQPIKIEVPEPS 328

Query: 914  FLSGNENLGPAPTTFMDDTDSSSVSRVHKPTKSGEKATQEVINLWKANGFSSLIIAAPEL 735
                +ENL     +  D   +   S   KP K+G   + E +  W+ +GFSSLI+AAP  
Sbjct: 329  M---DENLNQDDNSLSDCKGNDDTSIASKPVKAGRAPSPEKMKYWEEHGFSSLIVAAPGH 385

Query: 734  DTWSTLQDLLPLLSYSAPFAVYHQYLQPLTTCMHNLQVAKLAIGLQISEPWLREYQVLPS 555
            +  S + DLLPLLSYSAPFA+YHQ+LQPL  CMH+LQV+K AIGLQI+EPWLRE+QVLPS
Sbjct: 386  EVESLVADLLPLLSYSAPFAIYHQHLQPLAICMHSLQVSKSAIGLQITEPWLREFQVLPS 445

Query: 554  RTHPCMQMSAFGGYILSGIKI 492
            RTHP MQMS FGGYILSGI+I
Sbjct: 446  RTHPHMQMSGFGGYILSGIRI 466