BLASTX nr result

ID: Coptis21_contig00004611 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00004611
         (849 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK41064.1| unknown [Medicago truncatula]                          218   1e-54
ref|XP_002315187.1| predicted protein [Populus trichocarpa] gi|2...   217   2e-54
sp|P27880.1|HSP12_MEDSA RecName: Full=18.2 kDa class I heat shoc...   217   3e-54
ref|XP_003619696.1| 18.2 kDa class I heat shock protein [Medicag...   216   7e-54
ref|XP_003619703.1| 18.2 kDa class I heat shock protein [Medicag...   215   9e-54

>gb|AFK41064.1| unknown [Medicago truncatula]
          Length = 161

 Score =  218 bits (555), Expect = 1e-54
 Identities = 109/165 (66%), Positives = 128/165 (77%), Gaps = 3/165 (1%)
 Frame = +3

Query: 171 MSIIPSFFG---RRSNVFDPFSLDIFDPFEGFPFTNPDSNNRPLSQNFPNETTAMAHAKI 341
           MS+IPSFFG   RRSNVFDPFSLD++DPF+ FPFTN   +    + +FP E +A    +I
Sbjct: 1   MSLIPSFFGGRGRRSNVFDPFSLDVWDPFKDFPFTNSSLS----ASSFPQENSAFVSTRI 56

Query: 342 DWKETPNAHVFKADVPGLXXXXXXXXXXXXXXLQISGERNRDTEEKTDKWHRVERSSGKF 521
           DWKETP AHVFKAD+PGL              LQISGERN + E+K D+WHRVERSSGKF
Sbjct: 57  DWKETPEAHVFKADLPGLKKEEVKVEIEDDRVLQISGERNFEKEDKNDQWHRVERSSGKF 116

Query: 522 VRRFRLPENAKVDEVKASMENGVLTVTVPKEEVKKPNAKSIDISG 656
           +RRFRLPENAK+D+VKA+MENGVLTVTVPKEEVKKP+ KSI+ISG
Sbjct: 117 MRRFRLPENAKMDQVKAAMENGVLTVTVPKEEVKKPDVKSIEISG 161


>ref|XP_002315187.1| predicted protein [Populus trichocarpa] gi|222864227|gb|EEF01358.1|
           predicted protein [Populus trichocarpa]
          Length = 162

 Score =  217 bits (553), Expect = 2e-54
 Identities = 110/164 (67%), Positives = 133/164 (81%), Gaps = 2/164 (1%)
 Frame = +3

Query: 171 MSIIPS--FFGRRSNVFDPFSLDIFDPFEGFPFTNPDSNNRPLSQNFPNETTAMAHAKID 344
           MS+IPS  F GRRSN+FDPFSLDI+DPF+ FPFT+  + + P S+ F NETTA A+ +ID
Sbjct: 1   MSLIPSTLFGGRRSNIFDPFSLDIWDPFQDFPFTST-AISAPRSE-FANETTAFANTRID 58

Query: 345 WKETPNAHVFKADVPGLXXXXXXXXXXXXXXLQISGERNRDTEEKTDKWHRVERSSGKFV 524
           WKETP AHVFKAD+PGL              LQISGER+++ EEK DKWHRVERSSGKF+
Sbjct: 59  WKETPEAHVFKADLPGLKKEEVKVELEEGRVLQISGERSKEREEKNDKWHRVERSSGKFL 118

Query: 525 RRFRLPENAKVDEVKASMENGVLTVTVPKEEVKKPNAKSIDISG 656
           RRFRLPENAK+D++KA+MENGVLTVTVPKEEVKKP+ K+I+I+G
Sbjct: 119 RRFRLPENAKLDQLKANMENGVLTVTVPKEEVKKPDVKAIEITG 162


>sp|P27880.1|HSP12_MEDSA RecName: Full=18.2 kDa class I heat shock protein
           gi|19618|emb|CAA41547.1| heat shock protein [Medicago
           sativa]
          Length = 158

 Score =  217 bits (552), Expect = 3e-54
 Identities = 107/163 (65%), Positives = 127/163 (77%), Gaps = 1/163 (0%)
 Frame = +3

Query: 171 MSIIPSFFG-RRSNVFDPFSLDIFDPFEGFPFTNPDSNNRPLSQNFPNETTAMAHAKIDW 347
           MS+IPSFFG RRSNVFDPFSLD++DPF+ FPF     NN  LS +FP E +A    ++DW
Sbjct: 1   MSLIPSFFGGRRSNVFDPFSLDVWDPFKDFPF-----NNSALSASFPRENSAFVSTRVDW 55

Query: 348 KETPNAHVFKADVPGLXXXXXXXXXXXXXXLQISGERNRDTEEKTDKWHRVERSSGKFVR 527
           KETP AHVFKAD+PG+              LQISGER+ + E+K D+WHR+ERSSGKF+R
Sbjct: 56  KETPEAHVFKADLPGMKKEEVKVEIEDDRVLQISGERSVEKEDKNDQWHRLERSSGKFMR 115

Query: 528 RFRLPENAKVDEVKASMENGVLTVTVPKEEVKKPNAKSIDISG 656
           RFRLPENAK+D+VKA+MENGVLTVTVPKEEVKKP  K+IDISG
Sbjct: 116 RFRLPENAKMDQVKAAMENGVLTVTVPKEEVKKPEVKTIDISG 158


>ref|XP_003619696.1| 18.2 kDa class I heat shock protein [Medicago truncatula]
           gi|355494711|gb|AES75914.1| 18.2 kDa class I heat shock
           protein [Medicago truncatula]
          Length = 159

 Score =  216 bits (549), Expect = 7e-54
 Identities = 108/163 (66%), Positives = 127/163 (77%), Gaps = 1/163 (0%)
 Frame = +3

Query: 171 MSIIPSFFG-RRSNVFDPFSLDIFDPFEGFPFTNPDSNNRPLSQNFPNETTAMAHAKIDW 347
           MS+IPSFFG RRSNVFDPFSLD++DPF+ FP TN   +    + +FP E +A    +IDW
Sbjct: 1   MSLIPSFFGGRRSNVFDPFSLDVWDPFKDFPLTNSALS----ASSFPQENSAFVSTRIDW 56

Query: 348 KETPNAHVFKADVPGLXXXXXXXXXXXXXXLQISGERNRDTEEKTDKWHRVERSSGKFVR 527
           KETP AHVFKAD+PGL              LQISGERN + E+K D+WHRVERSSGKF+R
Sbjct: 57  KETPEAHVFKADLPGLKKEEVKVEIEGDRVLQISGERNVEKEDKNDQWHRVERSSGKFMR 116

Query: 528 RFRLPENAKVDEVKASMENGVLTVTVPKEEVKKPNAKSIDISG 656
           RFRLPENAK+D+VKA+MENGVLTVTVPKEEVKKP+ KSI+ISG
Sbjct: 117 RFRLPENAKMDQVKAAMENGVLTVTVPKEEVKKPDVKSIEISG 159


>ref|XP_003619703.1| 18.2 kDa class I heat shock protein [Medicago truncatula]
           gi|355494718|gb|AES75921.1| 18.2 kDa class I heat shock
           protein [Medicago truncatula]
          Length = 159

 Score =  215 bits (548), Expect = 9e-54
 Identities = 107/163 (65%), Positives = 126/163 (77%), Gaps = 1/163 (0%)
 Frame = +3

Query: 171 MSIIPSFFG-RRSNVFDPFSLDIFDPFEGFPFTNPDSNNRPLSQNFPNETTAMAHAKIDW 347
           MS+IPSFFG RRSN FDPFSLD++DPF+ FP TN   +    + +FP E +A A  +IDW
Sbjct: 1   MSLIPSFFGGRRSNTFDPFSLDVWDPFKDFPLTNSALS----ASSFPQENSAFASTRIDW 56

Query: 348 KETPNAHVFKADVPGLXXXXXXXXXXXXXXLQISGERNRDTEEKTDKWHRVERSSGKFVR 527
           KETP AHVFKAD+PGL              LQISGERN + E+K D+WHRVERSSGKF+R
Sbjct: 57  KETPEAHVFKADLPGLKKEEVKVEIEDDRVLQISGERNVEKEDKNDQWHRVERSSGKFMR 116

Query: 528 RFRLPENAKVDEVKASMENGVLTVTVPKEEVKKPNAKSIDISG 656
           RFRLPENAK+D+VKA+MENG+LTVTVPKEEVKKP  K+IDISG
Sbjct: 117 RFRLPENAKMDQVKAAMENGILTVTVPKEEVKKPQVKTIDISG 159


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