BLASTX nr result

ID: Coptis21_contig00004598 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00004598
         (290 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002298340.1| predicted protein [Populus trichocarpa] gi|2...    66   3e-09

>ref|XP_002298340.1| predicted protein [Populus trichocarpa] gi|222845598|gb|EEE83145.1|
           predicted protein [Populus trichocarpa]
          Length = 409

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 44/87 (50%), Positives = 47/87 (54%), Gaps = 3/87 (3%)
 Frame = +1

Query: 13  PGVGPTPVHDLNVXXXXXXXXXXXXAEXXXXXXXXXXXXXXXXXGTAQTPLPGTVQTPLP 192
           PG G TPVHDLNV            AE                 G+AQTPLPG VQTPLP
Sbjct: 68  PG-GLTPVHDLNVPYEGTEEYETPTAEILFPPTPLP--------GSAQTPLPGNVQTPLP 118

Query: 193 GNVQTPLPGSGEN-SMYQLPT--PSDY 264
           GNV TPLPGS +N SMY + T   SDY
Sbjct: 119 GNVPTPLPGSVDNSSMYNISTGSSSDY 145


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