BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00004594
         (540 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI30945.3| unnamed protein product [Vitis vinifera]              114   1e-23
ref|XP_002272135.1| PREDICTED: pentatricopeptide repeat-containi...   114   1e-23
emb|CAN80625.1| hypothetical protein VITISV_032617 [Vitis vinifera]   114   1e-23
ref|XP_003593855.1| Pentatricopeptide repeat-containing protein ...   109   3e-22
gb|AAG50561.1|AC073506_3 hypothetical protein [Arabidopsis thali...   106   2e-21

>emb|CBI30945.3| unnamed protein product [Vitis vinifera]
          Length = 796

 Score =  114 bits (284), Expect = 1e-23
 Identities = 49/68 (72%), Positives = 59/68 (86%)
 Frame = +2

Query: 335 DEIRHPLVREVCRLIQFRPSWNPKLEYELKHLLRALKPQEVCVVLRSQADIRIALSFFYW 514
           DE RHPLVRE+CRLI+ R +WNPKLE EL+HLLR+LKP++VC VL+ Q D R+AL FFYW
Sbjct: 158 DESRHPLVREICRLIELRSAWNPKLEGELRHLLRSLKPRQVCAVLQLQTDERVALRFFYW 217

Query: 515 ADKQWRYR 538
           AD+QWRYR
Sbjct: 218 ADRQWRYR 225


>ref|XP_002272135.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Vitis vinifera]
          Length = 733

 Score =  114 bits (284), Expect = 1e-23
 Identities = 49/68 (72%), Positives = 59/68 (86%)
 Frame = +2

Query: 335 DEIRHPLVREVCRLIQFRPSWNPKLEYELKHLLRALKPQEVCVVLRSQADIRIALSFFYW 514
           DE RHPLVRE+CRLI+ R +WNPKLE EL+HLLR+LKP++VC VL+ Q D R+AL FFYW
Sbjct: 64  DESRHPLVREICRLIELRSAWNPKLEGELRHLLRSLKPRQVCAVLQLQTDERVALRFFYW 123

Query: 515 ADKQWRYR 538
           AD+QWRYR
Sbjct: 124 ADRQWRYR 131


>emb|CAN80625.1| hypothetical protein VITISV_032617 [Vitis vinifera]
          Length = 733

 Score =  114 bits (284), Expect = 1e-23
 Identities = 49/68 (72%), Positives = 59/68 (86%)
 Frame = +2

Query: 335 DEIRHPLVREVCRLIQFRPSWNPKLEYELKHLLRALKPQEVCVVLRSQADIRIALSFFYW 514
           DE RHPLVRE+CRLI+ R +WNPKLE EL+HLLR+LKP++VC VL+ Q D R+AL FFYW
Sbjct: 64  DESRHPLVREICRLIELRSAWNPKLEGELRHLLRSLKPRQVCAVLQLQTDERVALRFFYW 123

Query: 515 ADKQWRYR 538
           AD+QWRYR
Sbjct: 124 ADRQWRYR 131


>ref|XP_003593855.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355482903|gb|AES64106.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 790

 Score =  109 bits (272), Expect = 3e-22
 Identities = 48/71 (67%), Positives = 55/71 (77%)
 Frame = +2

Query: 326 VSRDEIRHPLVREVCRLIQFRPSWNPKLEYELKHLLRALKPQEVCVVLRSQADIRIALSF 505
           +   E RHP+VREVCRLI  R +WNPK E  L+HLLR+L P+ VC VLRSQ D RIAL F
Sbjct: 124 IDESEFRHPIVREVCRLISLRSNWNPKFEENLRHLLRSLNPRLVCAVLRSQDDERIALDF 183

Query: 506 FYWADKQWRYR 538
           FYWAD+QWRYR
Sbjct: 184 FYWADRQWRYR 194


>gb|AAG50561.1|AC073506_3 hypothetical protein [Arabidopsis thaliana]
          Length = 802

 Score =  106 bits (265), Expect = 2e-21
 Identities = 49/71 (69%), Positives = 57/71 (80%)
 Frame = +2

Query: 326 VSRDEIRHPLVREVCRLIQFRPSWNPKLEYELKHLLRALKPQEVCVVLRSQADIRIALSF 505
           V  DE RHPLVREV RLI  R SWNPK E ++++LLR+LKP +VC VLRSQ D R+AL F
Sbjct: 134 VEEDESRHPLVREVGRLIGLRSSWNPKHEGQMRNLLRSLKPSQVCAVLRSQDDERVALKF 193

Query: 506 FYWADKQWRYR 538
           FYWAD+QWRYR
Sbjct: 194 FYWADRQWRYR 204