BLASTX nr result

ID: Coptis21_contig00004590 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00004590
         (575 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI23656.3| unnamed protein product [Vitis vinifera]               72   7e-11
emb|CBI23657.3| unnamed protein product [Vitis vinifera]               71   1e-10
ref|XP_004173422.1| PREDICTED: G-type lectin S-receptor-like ser...    70   2e-10
ref|XP_002281413.1| PREDICTED: G-type lectin S-receptor-like ser...    70   2e-10
ref|XP_002325041.1| predicted protein [Populus trichocarpa] gi|2...    70   2e-10

>emb|CBI23656.3| unnamed protein product [Vitis vinifera]
          Length = 493

 Score = 72.0 bits (175), Expect = 7e-11
 Identities = 43/104 (41%), Positives = 61/104 (58%), Gaps = 4/104 (3%)
 Frame = +1

Query: 274 GAYGSSSRIEMSLGQLDRKKTNMVGLKQYSNEDLTHFTKNFTIPIGSGAYGDVFQGELPG 453
           G    S  +E+ +  + ++K       ++S + L  FT+NF+  +GSG +G V++G LP 
Sbjct: 128 GRVDGSGTVEICIQDMLKEKP-----VRFSPQQLAAFTQNFSTKLGSGGFGHVYRGVLPD 182

Query: 454 GVQVAVKRL-INIATD---VNTFMAEVGTMSSTLHRNLVRLYGY 573
           GVQ+AVK L  N   D      FMAEV T+  T HRNLVRLYG+
Sbjct: 183 GVQIAVKVLKHNRGQDKRMEEQFMAEVSTIGRTYHRNLVRLYGF 226


>emb|CBI23657.3| unnamed protein product [Vitis vinifera]
          Length = 233

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 35/98 (35%), Positives = 62/98 (63%), Gaps = 5/98 (5%)
 Frame = +1

Query: 295 RIEMSLGQLDRKKTNMVGLKQYSNEDLTHFTKNFTIPIGSGAYGDVFQGELPGGVQVAVK 474
           ++EM++  + ++K       ++S++ L  +T+N++  +GSG +G+V++ E P G  +AVK
Sbjct: 61  KVEMAIENMQKEKP-----VRFSSKQLAAYTRNYSTKLGSGGFGEVYKAEFPNGAHMAVK 115

Query: 475 RLINIATDVN-----TFMAEVGTMSSTLHRNLVRLYGY 573
            ++N  T ++      FM EV T+  T HRNLVRLYG+
Sbjct: 116 -VLNHNTSISKRVEEQFMTEVSTLGRTYHRNLVRLYGF 152


>ref|XP_004173422.1| PREDICTED: G-type lectin S-receptor-like serine/threonine-protein
           kinase At1g34300-like [Cucumis sativus]
          Length = 358

 Score = 70.5 bits (171), Expect = 2e-10
 Identities = 35/75 (46%), Positives = 50/75 (66%), Gaps = 2/75 (2%)
 Frame = +1

Query: 355 QYSNEDLTHFTKNFTIPIGSGAYGDVFQGELPGGVQVAVKRLINIA--TDVNTFMAEVGT 528
           +++ + L  FT N++ P+GSG +G V++G+ P GV++AVK L   A       FMAEVGT
Sbjct: 15  RFTPQQLYCFTSNYSTPLGSGGFGSVYKGQFPNGVKIAVKVLKRNADRQAEEQFMAEVGT 74

Query: 529 MSSTLHRNLVRLYGY 573
           +  T H NLVRLYG+
Sbjct: 75  IGRTYHINLVRLYGF 89


>ref|XP_002281413.1| PREDICTED: G-type lectin S-receptor-like serine/threonine-protein
           kinase SD2-5-like [Vitis vinifera]
          Length = 383

 Score = 70.5 bits (171), Expect = 2e-10
 Identities = 40/102 (39%), Positives = 63/102 (61%), Gaps = 5/102 (4%)
 Frame = +1

Query: 283 GSSSRIEMSLGQLDRKKTNMVGLKQYSNEDLTHFTKNFTIPIGSGAYGDVFQGELPGGVQ 462
           G    +E+ +  + R+      L ++S++ +  FT N++  +G+GA+G V++GE P GVQ
Sbjct: 36  GDRETVEIFIENMQRES-----LVRFSSKQVAAFTWNYSTKLGAGAFGVVYKGEFPNGVQ 90

Query: 463 VAVKRL-----INIATDVNTFMAEVGTMSSTLHRNLVRLYGY 573
           +AVK L     ++   +V  FMAEV T+  T HRNLVRLYG+
Sbjct: 91  LAVKVLKYNNNVDKMMEVQ-FMAEVSTIGRTHHRNLVRLYGF 131


>ref|XP_002325041.1| predicted protein [Populus trichocarpa] gi|222866475|gb|EEF03606.1|
           predicted protein [Populus trichocarpa]
          Length = 300

 Score = 70.5 bits (171), Expect = 2e-10
 Identities = 37/75 (49%), Positives = 47/75 (62%), Gaps = 2/75 (2%)
 Frame = +1

Query: 355 QYSNEDLTHFTKNFTIPIGSGAYGDVFQGELPGGVQVAVKRLINIATD--VNTFMAEVGT 528
           Q+S + +  FT   +  +GSGA+G VF+G  P G+ VAVK L N +       FMAEVGT
Sbjct: 1   QFSPQQIQEFTNGCSTILGSGAFGVVFKGNFPNGIPVAVKALSNHSNKKLEEQFMAEVGT 60

Query: 529 MSSTLHRNLVRLYGY 573
           M  T H NLVRLYG+
Sbjct: 61  MGRTYHVNLVRLYGF 75


Top