BLASTX nr result

ID: Coptis21_contig00004586 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00004586
         (256 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002317338.1| predicted protein [Populus trichocarpa] gi|2...    52   2e-12
ref|XP_002277895.2| PREDICTED: uncharacterized protein LOC100265...    49   7e-10
emb|CBI26658.3| unnamed protein product [Vitis vinifera]               49   7e-10
ref|XP_003530753.1| PREDICTED: uncharacterized protein LOC100800...    52   2e-09
ref|XP_003553070.1| PREDICTED: uncharacterized protein LOC100788...    52   6e-09

>ref|XP_002317338.1| predicted protein [Populus trichocarpa] gi|222860403|gb|EEE97950.1|
           predicted protein [Populus trichocarpa]
          Length = 526

 Score = 52.4 bits (124), Expect(2) = 2e-12
 Identities = 24/25 (96%), Positives = 24/25 (96%)
 Frame = -1

Query: 256 SCGAGCSQLLSDMQAFKAANPGCIL 182
           S GAGCSQLLSDMQAFKAANPGCIL
Sbjct: 273 SVGAGCSQLLSDMQAFKAANPGCIL 297



 Score = 44.3 bits (103), Expect(2) = 2e-12
 Identities = 20/35 (57%), Positives = 26/35 (74%)
 Frame = -2

Query: 183 WSRSDPKDEAQDSCNV*DSTTKIGQLSSRMQKEGN 79
           W+  +P DEAQ+  +  DS++  GQLSSRMQKEGN
Sbjct: 309 WTEGEPSDEAQEYVDQVDSSSTRGQLSSRMQKEGN 343


>ref|XP_002277895.2| PREDICTED: uncharacterized protein LOC100265786 [Vitis vinifera]
          Length = 694

 Score = 48.5 bits (114), Expect(2) = 7e-10
 Identities = 23/25 (92%), Positives = 23/25 (92%)
 Frame = -1

Query: 256 SCGAGCSQLLSDMQAFKAANPGCIL 182
           S GAGCSQLLSDMQAFKAANPG IL
Sbjct: 420 SVGAGCSQLLSDMQAFKAANPGSIL 444



 Score = 39.7 bits (91), Expect(2) = 7e-10
 Identities = 18/35 (51%), Positives = 26/35 (74%)
 Frame = -2

Query: 183 WSRSDPKDEAQDSCNV*DSTTKIGQLSSRMQKEGN 79
           W+ ++P DE +D+ +  DS +  GQLSSRM+KEGN
Sbjct: 456 WTDTEPSDEFKDTFDGGDSLSARGQLSSRMRKEGN 490


>emb|CBI26658.3| unnamed protein product [Vitis vinifera]
          Length = 692

 Score = 48.5 bits (114), Expect(2) = 7e-10
 Identities = 23/25 (92%), Positives = 23/25 (92%)
 Frame = -1

Query: 256 SCGAGCSQLLSDMQAFKAANPGCIL 182
           S GAGCSQLLSDMQAFKAANPG IL
Sbjct: 418 SVGAGCSQLLSDMQAFKAANPGSIL 442



 Score = 39.7 bits (91), Expect(2) = 7e-10
 Identities = 18/35 (51%), Positives = 26/35 (74%)
 Frame = -2

Query: 183 WSRSDPKDEAQDSCNV*DSTTKIGQLSSRMQKEGN 79
           W+ ++P DE +D+ +  DS +  GQLSSRM+KEGN
Sbjct: 454 WTDTEPSDEFKDTFDGGDSLSARGQLSSRMRKEGN 488


>ref|XP_003530753.1| PREDICTED: uncharacterized protein LOC100800515 [Glycine max]
          Length = 699

 Score = 52.4 bits (124), Expect(2) = 2e-09
 Identities = 24/25 (96%), Positives = 24/25 (96%)
 Frame = -1

Query: 256 SCGAGCSQLLSDMQAFKAANPGCIL 182
           S GAGCSQLLSDMQAFKAANPGCIL
Sbjct: 417 SVGAGCSQLLSDMQAFKAANPGCIL 441



 Score = 34.7 bits (78), Expect(2) = 2e-09
 Identities = 18/35 (51%), Positives = 22/35 (62%)
 Frame = -2

Query: 183 WSRSDPKDEAQDSCNV*DSTTKIGQLSSRMQKEGN 79
           WS S+   E +DS    +S +  GQLS RMQKEGN
Sbjct: 453 WSESEGSTEDRDSSYGGESMSTRGQLSLRMQKEGN 487


>ref|XP_003553070.1| PREDICTED: uncharacterized protein LOC100788608 [Glycine max]
          Length = 709

 Score = 52.4 bits (124), Expect(2) = 6e-09
 Identities = 24/25 (96%), Positives = 24/25 (96%)
 Frame = -1

Query: 256 SCGAGCSQLLSDMQAFKAANPGCIL 182
           S GAGCSQLLSDMQAFKAANPGCIL
Sbjct: 419 SVGAGCSQLLSDMQAFKAANPGCIL 443



 Score = 32.7 bits (73), Expect(2) = 6e-09
 Identities = 17/35 (48%), Positives = 21/35 (60%)
 Frame = -2

Query: 183 WSRSDPKDEAQDSCNV*DSTTKIGQLSSRMQKEGN 79
           W  S+   E +DS    +S +  GQLS RMQKEGN
Sbjct: 455 WMESEGSTEDRDSFYGGESMSSRGQLSLRMQKEGN 489


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