BLASTX nr result
ID: Coptis21_contig00004586
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00004586 (256 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002317338.1| predicted protein [Populus trichocarpa] gi|2... 52 2e-12 ref|XP_002277895.2| PREDICTED: uncharacterized protein LOC100265... 49 7e-10 emb|CBI26658.3| unnamed protein product [Vitis vinifera] 49 7e-10 ref|XP_003530753.1| PREDICTED: uncharacterized protein LOC100800... 52 2e-09 ref|XP_003553070.1| PREDICTED: uncharacterized protein LOC100788... 52 6e-09 >ref|XP_002317338.1| predicted protein [Populus trichocarpa] gi|222860403|gb|EEE97950.1| predicted protein [Populus trichocarpa] Length = 526 Score = 52.4 bits (124), Expect(2) = 2e-12 Identities = 24/25 (96%), Positives = 24/25 (96%) Frame = -1 Query: 256 SCGAGCSQLLSDMQAFKAANPGCIL 182 S GAGCSQLLSDMQAFKAANPGCIL Sbjct: 273 SVGAGCSQLLSDMQAFKAANPGCIL 297 Score = 44.3 bits (103), Expect(2) = 2e-12 Identities = 20/35 (57%), Positives = 26/35 (74%) Frame = -2 Query: 183 WSRSDPKDEAQDSCNV*DSTTKIGQLSSRMQKEGN 79 W+ +P DEAQ+ + DS++ GQLSSRMQKEGN Sbjct: 309 WTEGEPSDEAQEYVDQVDSSSTRGQLSSRMQKEGN 343 >ref|XP_002277895.2| PREDICTED: uncharacterized protein LOC100265786 [Vitis vinifera] Length = 694 Score = 48.5 bits (114), Expect(2) = 7e-10 Identities = 23/25 (92%), Positives = 23/25 (92%) Frame = -1 Query: 256 SCGAGCSQLLSDMQAFKAANPGCIL 182 S GAGCSQLLSDMQAFKAANPG IL Sbjct: 420 SVGAGCSQLLSDMQAFKAANPGSIL 444 Score = 39.7 bits (91), Expect(2) = 7e-10 Identities = 18/35 (51%), Positives = 26/35 (74%) Frame = -2 Query: 183 WSRSDPKDEAQDSCNV*DSTTKIGQLSSRMQKEGN 79 W+ ++P DE +D+ + DS + GQLSSRM+KEGN Sbjct: 456 WTDTEPSDEFKDTFDGGDSLSARGQLSSRMRKEGN 490 >emb|CBI26658.3| unnamed protein product [Vitis vinifera] Length = 692 Score = 48.5 bits (114), Expect(2) = 7e-10 Identities = 23/25 (92%), Positives = 23/25 (92%) Frame = -1 Query: 256 SCGAGCSQLLSDMQAFKAANPGCIL 182 S GAGCSQLLSDMQAFKAANPG IL Sbjct: 418 SVGAGCSQLLSDMQAFKAANPGSIL 442 Score = 39.7 bits (91), Expect(2) = 7e-10 Identities = 18/35 (51%), Positives = 26/35 (74%) Frame = -2 Query: 183 WSRSDPKDEAQDSCNV*DSTTKIGQLSSRMQKEGN 79 W+ ++P DE +D+ + DS + GQLSSRM+KEGN Sbjct: 454 WTDTEPSDEFKDTFDGGDSLSARGQLSSRMRKEGN 488 >ref|XP_003530753.1| PREDICTED: uncharacterized protein LOC100800515 [Glycine max] Length = 699 Score = 52.4 bits (124), Expect(2) = 2e-09 Identities = 24/25 (96%), Positives = 24/25 (96%) Frame = -1 Query: 256 SCGAGCSQLLSDMQAFKAANPGCIL 182 S GAGCSQLLSDMQAFKAANPGCIL Sbjct: 417 SVGAGCSQLLSDMQAFKAANPGCIL 441 Score = 34.7 bits (78), Expect(2) = 2e-09 Identities = 18/35 (51%), Positives = 22/35 (62%) Frame = -2 Query: 183 WSRSDPKDEAQDSCNV*DSTTKIGQLSSRMQKEGN 79 WS S+ E +DS +S + GQLS RMQKEGN Sbjct: 453 WSESEGSTEDRDSSYGGESMSTRGQLSLRMQKEGN 487 >ref|XP_003553070.1| PREDICTED: uncharacterized protein LOC100788608 [Glycine max] Length = 709 Score = 52.4 bits (124), Expect(2) = 6e-09 Identities = 24/25 (96%), Positives = 24/25 (96%) Frame = -1 Query: 256 SCGAGCSQLLSDMQAFKAANPGCIL 182 S GAGCSQLLSDMQAFKAANPGCIL Sbjct: 419 SVGAGCSQLLSDMQAFKAANPGCIL 443 Score = 32.7 bits (73), Expect(2) = 6e-09 Identities = 17/35 (48%), Positives = 21/35 (60%) Frame = -2 Query: 183 WSRSDPKDEAQDSCNV*DSTTKIGQLSSRMQKEGN 79 W S+ E +DS +S + GQLS RMQKEGN Sbjct: 455 WMESEGSTEDRDSFYGGESMSSRGQLSLRMQKEGN 489