BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00004583
         (696 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003527775.1| PREDICTED: DNA-directed RNA polymerase D sub...    91   2e-16
gb|AAY68198.1| RNA polymerase IV second largest subunit [Rhodode...    90   4e-16
ref|XP_003523670.1| PREDICTED: DNA-directed RNA polymerase D sub...    90   5e-16
ref|XP_004157128.1| PREDICTED: DNA-directed RNA polymerase D sub...    89   6e-16
ref|XP_004145500.1| PREDICTED: DNA-directed RNA polymerase D sub...    89   6e-16

>ref|XP_003527775.1| PREDICTED: DNA-directed RNA polymerase D subunit 2a-like [Glycine
            max]
          Length = 1205

 Score = 90.9 bits (224), Expect = 2e-16
 Identities = 40/49 (81%), Positives = 46/49 (93%)
 Frame = +1

Query: 1    NPHAFPTRQTPGQLLEAALGKGIACGGLMRYATPFTTPLIDHITDQLHR 147
            NPHAFP+RQTPGQLLEAALGKGIACGG++R ATPF+TP +D IT+QLHR
Sbjct: 991  NPHAFPSRQTPGQLLEAALGKGIACGGILRQATPFSTPSVDAITEQLHR 1039


>gb|AAY68198.1| RNA polymerase IV second largest subunit [Rhododendron
           macrophyllum]
          Length = 1019

 Score = 90.1 bits (222), Expect = 4e-16
 Identities = 40/49 (81%), Positives = 45/49 (91%)
 Frame = +1

Query: 1   NPHAFPTRQTPGQLLEAALGKGIACGGLMRYATPFTTPLIDHITDQLHR 147
           NPHAFP+RQTPGQLLEAALGKGIACGGL +YATPF+T  +D +TDQLHR
Sbjct: 805 NPHAFPSRQTPGQLLEAALGKGIACGGLQKYATPFSTLSVDAVTDQLHR 853


>ref|XP_003523670.1| PREDICTED: DNA-directed RNA polymerase D subunit 2a-like [Glycine
            max]
          Length = 1205

 Score = 89.7 bits (221), Expect = 5e-16
 Identities = 39/49 (79%), Positives = 46/49 (93%)
 Frame = +1

Query: 1    NPHAFPTRQTPGQLLEAALGKGIACGGLMRYATPFTTPLIDHITDQLHR 147
            NPHAFP+RQTPGQLLEAALGKGIACGG+++ ATPF+TP +D IT+QLHR
Sbjct: 991  NPHAFPSRQTPGQLLEAALGKGIACGGILKQATPFSTPSVDAITEQLHR 1039


>ref|XP_004157128.1| PREDICTED: DNA-directed RNA polymerase D subunit 2a-like [Cucumis
            sativus]
          Length = 1031

 Score = 89.4 bits (220), Expect = 6e-16
 Identities = 40/49 (81%), Positives = 45/49 (91%)
 Frame = +1

Query: 1    NPHAFPTRQTPGQLLEAALGKGIACGGLMRYATPFTTPLIDHITDQLHR 147
            NPHAFP+RQTPGQLLEAALGKGIA GG ++YATPF+TP +D ITDQLHR
Sbjct: 983  NPHAFPSRQTPGQLLEAALGKGIAAGGSLKYATPFSTPSVDAITDQLHR 1031


>ref|XP_004145500.1| PREDICTED: DNA-directed RNA polymerase D subunit 2a-like [Cucumis
            sativus]
          Length = 1197

 Score = 89.4 bits (220), Expect = 6e-16
 Identities = 40/49 (81%), Positives = 45/49 (91%)
 Frame = +1

Query: 1    NPHAFPTRQTPGQLLEAALGKGIACGGLMRYATPFTTPLIDHITDQLHR 147
            NPHAFP+RQTPGQLLEAALGKGIA GG ++YATPF+TP +D ITDQLHR
Sbjct: 983  NPHAFPSRQTPGQLLEAALGKGIAAGGSLKYATPFSTPSVDAITDQLHR 1031