BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00004582
         (651 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI21137.3| unnamed protein product [Vitis vinifera]              204   4e-90
ref|XP_002283296.1| PREDICTED: DNA-directed RNA polymerase D sub...   204   4e-90
ref|XP_004145500.1| PREDICTED: DNA-directed RNA polymerase D sub...   204   8e-90
ref|XP_002515428.1| DNA-directed RNA polymerase subunit, putativ...   207   1e-89
ref|XP_003523670.1| PREDICTED: DNA-directed RNA polymerase D sub...   207   2e-89

>emb|CBI21137.3| unnamed protein product [Vitis vinifera]
          Length = 1220

 Score =  204 bits (519), Expect(2) = 4e-90
 Identities = 97/112 (86%), Positives = 105/112 (93%)
 Frame = +1

Query: 1    SLDDDGFPFIGANLQSGDIVIGKCAESGADHSIKLKHTERGKVQKVILSANDEGTNFAAV 180
            SLDDDGFPFIGANLQ+GDIVIG+CAESG DHSIKLKHTERG VQKV++SAND+G NFA V
Sbjct: 900  SLDDDGFPFIGANLQNGDIVIGRCAESGVDHSIKLKHTERGMVQKVVVSANDDGKNFAVV 959

Query: 181  SLRQVRSPIVGDKFSSMHGQKGVIGLLESQENFPFTHQGIVPDIVINPHAFP 336
            SLRQVR+P +GDKFSSMHGQKGV+G LESQENFPFT QGIVPDIVINPHAFP
Sbjct: 960  SLRQVRTPCLGDKFSSMHGQKGVLGFLESQENFPFTIQGIVPDIVINPHAFP 1011



 Score =  153 bits (387), Expect(2) = 4e-90
 Identities = 71/85 (83%), Positives = 80/85 (94%)
 Frame = +3

Query: 396  TRQTPGQLLEAALGKGIACGGLMRYATPFTTPSIDHITDQLHRAGYSRWGHERVYSGHYG 575
            +RQTPGQLLEAALGKGIACGGL+R+ATPF+T S+D I DQLHRAG+SRWGHERVY+G  G
Sbjct: 1012 SRQTPGQLLEAALGKGIACGGLLRHATPFSTLSVDAIADQLHRAGFSRWGHERVYNGRTG 1071

Query: 576  EMMRSLIFIGPTFYQRLIHMAEDKV 650
            EM+RSLIF+GPTFYQRLIHMAEDKV
Sbjct: 1072 EMLRSLIFMGPTFYQRLIHMAEDKV 1096


>ref|XP_002283296.1| PREDICTED: DNA-directed RNA polymerase D subunit 2a-like [Vitis
            vinifera]
          Length = 1198

 Score =  204 bits (519), Expect(2) = 4e-90
 Identities = 97/112 (86%), Positives = 105/112 (93%)
 Frame = +1

Query: 1    SLDDDGFPFIGANLQSGDIVIGKCAESGADHSIKLKHTERGKVQKVILSANDEGTNFAAV 180
            SLDDDGFPFIGANLQ+GDIVIG+CAESG DHSIKLKHTERG VQKV++SAND+G NFA V
Sbjct: 878  SLDDDGFPFIGANLQNGDIVIGRCAESGVDHSIKLKHTERGMVQKVVVSANDDGKNFAVV 937

Query: 181  SLRQVRSPIVGDKFSSMHGQKGVIGLLESQENFPFTHQGIVPDIVINPHAFP 336
            SLRQVR+P +GDKFSSMHGQKGV+G LESQENFPFT QGIVPDIVINPHAFP
Sbjct: 938  SLRQVRTPCLGDKFSSMHGQKGVLGFLESQENFPFTIQGIVPDIVINPHAFP 989



 Score =  153 bits (387), Expect(2) = 4e-90
 Identities = 71/85 (83%), Positives = 80/85 (94%)
 Frame = +3

Query: 396  TRQTPGQLLEAALGKGIACGGLMRYATPFTTPSIDHITDQLHRAGYSRWGHERVYSGHYG 575
            +RQTPGQLLEAALGKGIACGGL+R+ATPF+T S+D I DQLHRAG+SRWGHERVY+G  G
Sbjct: 990  SRQTPGQLLEAALGKGIACGGLLRHATPFSTLSVDAIADQLHRAGFSRWGHERVYNGRTG 1049

Query: 576  EMMRSLIFIGPTFYQRLIHMAEDKV 650
            EM+RSLIF+GPTFYQRLIHMAEDKV
Sbjct: 1050 EMLRSLIFMGPTFYQRLIHMAEDKV 1074


>ref|XP_004145500.1| PREDICTED: DNA-directed RNA polymerase D subunit 2a-like [Cucumis
            sativus]
          Length = 1197

 Score =  204 bits (520), Expect(2) = 8e-90
 Identities = 97/112 (86%), Positives = 106/112 (94%)
 Frame = +1

Query: 1    SLDDDGFPFIGANLQSGDIVIGKCAESGADHSIKLKHTERGKVQKVILSANDEGTNFAAV 180
            SLDDDGFP+IGANLQSGDIVIG+CAESGADHSIKLKHTE+G VQKV+LS+ND+G N+A V
Sbjct: 877  SLDDDGFPYIGANLQSGDIVIGRCAESGADHSIKLKHTEKGMVQKVVLSSNDDGKNYAVV 936

Query: 181  SLRQVRSPIVGDKFSSMHGQKGVIGLLESQENFPFTHQGIVPDIVINPHAFP 336
            SLRQVRSP +GDKFSSMHGQKGV+G LESQENFPFT QGIVPDIVINPHAFP
Sbjct: 937  SLRQVRSPCLGDKFSSMHGQKGVLGFLESQENFPFTIQGIVPDIVINPHAFP 988



 Score =  152 bits (383), Expect(2) = 8e-90
 Identities = 71/85 (83%), Positives = 79/85 (92%)
 Frame = +3

Query: 396  TRQTPGQLLEAALGKGIACGGLMRYATPFTTPSIDHITDQLHRAGYSRWGHERVYSGHYG 575
            +RQTPGQLLEAALGKGIA GG ++YATPF+TPS+D ITDQLHRAG+SRWG ERVY+G  G
Sbjct: 989  SRQTPGQLLEAALGKGIAAGGSLKYATPFSTPSVDAITDQLHRAGFSRWGSERVYNGRTG 1048

Query: 576  EMMRSLIFIGPTFYQRLIHMAEDKV 650
            EMMRSLIF+GPTFYQRLIHMAEDKV
Sbjct: 1049 EMMRSLIFMGPTFYQRLIHMAEDKV 1073


>ref|XP_002515428.1| DNA-directed RNA polymerase subunit, putative [Ricinus communis]
            gi|223545372|gb|EEF46877.1| DNA-directed RNA polymerase
            subunit, putative [Ricinus communis]
          Length = 1203

 Score =  207 bits (527), Expect(2) = 1e-89
 Identities = 99/112 (88%), Positives = 105/112 (93%)
 Frame = +1

Query: 1    SLDDDGFPFIGANLQSGDIVIGKCAESGADHSIKLKHTERGKVQKVILSANDEGTNFAAV 180
            SLDDDGFPFIGANLQSGDIVIG+CAESG DHSIKLKHTERG VQKV+LS+NDEG NFA V
Sbjct: 883  SLDDDGFPFIGANLQSGDIVIGRCAESGPDHSIKLKHTERGMVQKVVLSSNDEGKNFAVV 942

Query: 181  SLRQVRSPIVGDKFSSMHGQKGVIGLLESQENFPFTHQGIVPDIVINPHAFP 336
            SLRQVRSP +GDKFSSMHGQKGV+G LESQENFPFT QGIVPDIVINPH+FP
Sbjct: 943  SLRQVRSPCLGDKFSSMHGQKGVLGFLESQENFPFTRQGIVPDIVINPHSFP 994



 Score =  148 bits (374), Expect(2) = 1e-89
 Identities = 69/85 (81%), Positives = 80/85 (94%)
 Frame = +3

Query: 396  TRQTPGQLLEAALGKGIACGGLMRYATPFTTPSIDHITDQLHRAGYSRWGHERVYSGHYG 575
            +RQTPGQLLEAALGKGIACGG M+YATPF+T S++ IT+QLHRAG+SRWG+ERVY+G  G
Sbjct: 995  SRQTPGQLLEAALGKGIACGGSMKYATPFSTLSVEAITNQLHRAGFSRWGNERVYNGRTG 1054

Query: 576  EMMRSLIFIGPTFYQRLIHMAEDKV 650
            EM+RSLIF+GPTFYQRLIHMAEDKV
Sbjct: 1055 EMVRSLIFMGPTFYQRLIHMAEDKV 1079


>ref|XP_003523670.1| PREDICTED: DNA-directed RNA polymerase D subunit 2a-like [Glycine
            max]
          Length = 1205

 Score =  207 bits (528), Expect(2) = 2e-89
 Identities = 97/112 (86%), Positives = 107/112 (95%)
 Frame = +1

Query: 1    SLDDDGFPFIGANLQSGDIVIGKCAESGADHSIKLKHTERGKVQKVILSANDEGTNFAAV 180
            SLDDDGFP++GANLQSGDI+IGKCAESGAD+S+KLKHTERG VQKV+LS+NDEG NFA V
Sbjct: 885  SLDDDGFPYVGANLQSGDIIIGKCAESGADNSVKLKHTERGYVQKVVLSSNDEGKNFAVV 944

Query: 181  SLRQVRSPIVGDKFSSMHGQKGVIGLLESQENFPFTHQGIVPDIVINPHAFP 336
            SLRQVRSP++GDKFSSMHGQKGV+G LESQENFPFT QGIVPDIVINPHAFP
Sbjct: 945  SLRQVRSPVLGDKFSSMHGQKGVLGFLESQENFPFTRQGIVPDIVINPHAFP 996



 Score =  147 bits (372), Expect(2) = 2e-89
 Identities = 67/85 (78%), Positives = 80/85 (94%)
 Frame = +3

Query: 396  TRQTPGQLLEAALGKGIACGGLMRYATPFTTPSIDHITDQLHRAGYSRWGHERVYSGHYG 575
            +RQTPGQLLEAALGKGIACGG+++ ATPF+TPS+D IT+QLHRAG+SRWG+ERVY+G  G
Sbjct: 997  SRQTPGQLLEAALGKGIACGGILKQATPFSTPSVDAITEQLHRAGFSRWGNERVYNGRTG 1056

Query: 576  EMMRSLIFIGPTFYQRLIHMAEDKV 650
            EM+RSLIF+GPTFYQRL HM+EDKV
Sbjct: 1057 EMVRSLIFMGPTFYQRLHHMSEDKV 1081