BLASTX nr result
ID: Coptis21_contig00004582
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00004582 (651 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CBI21137.3| unnamed protein product [Vitis vinifera] 204 4e-90 ref|XP_002283296.1| PREDICTED: DNA-directed RNA polymerase D sub... 204 4e-90 ref|XP_004145500.1| PREDICTED: DNA-directed RNA polymerase D sub... 204 8e-90 ref|XP_002515428.1| DNA-directed RNA polymerase subunit, putativ... 207 1e-89 ref|XP_003523670.1| PREDICTED: DNA-directed RNA polymerase D sub... 207 2e-89 >emb|CBI21137.3| unnamed protein product [Vitis vinifera] Length = 1220 Score = 204 bits (519), Expect(2) = 4e-90 Identities = 97/112 (86%), Positives = 105/112 (93%) Frame = +1 Query: 1 SLDDDGFPFIGANLQSGDIVIGKCAESGADHSIKLKHTERGKVQKVILSANDEGTNFAAV 180 SLDDDGFPFIGANLQ+GDIVIG+CAESG DHSIKLKHTERG VQKV++SAND+G NFA V Sbjct: 900 SLDDDGFPFIGANLQNGDIVIGRCAESGVDHSIKLKHTERGMVQKVVVSANDDGKNFAVV 959 Query: 181 SLRQVRSPIVGDKFSSMHGQKGVIGLLESQENFPFTHQGIVPDIVINPHAFP 336 SLRQVR+P +GDKFSSMHGQKGV+G LESQENFPFT QGIVPDIVINPHAFP Sbjct: 960 SLRQVRTPCLGDKFSSMHGQKGVLGFLESQENFPFTIQGIVPDIVINPHAFP 1011 Score = 153 bits (387), Expect(2) = 4e-90 Identities = 71/85 (83%), Positives = 80/85 (94%) Frame = +3 Query: 396 TRQTPGQLLEAALGKGIACGGLMRYATPFTTPSIDHITDQLHRAGYSRWGHERVYSGHYG 575 +RQTPGQLLEAALGKGIACGGL+R+ATPF+T S+D I DQLHRAG+SRWGHERVY+G G Sbjct: 1012 SRQTPGQLLEAALGKGIACGGLLRHATPFSTLSVDAIADQLHRAGFSRWGHERVYNGRTG 1071 Query: 576 EMMRSLIFIGPTFYQRLIHMAEDKV 650 EM+RSLIF+GPTFYQRLIHMAEDKV Sbjct: 1072 EMLRSLIFMGPTFYQRLIHMAEDKV 1096 >ref|XP_002283296.1| PREDICTED: DNA-directed RNA polymerase D subunit 2a-like [Vitis vinifera] Length = 1198 Score = 204 bits (519), Expect(2) = 4e-90 Identities = 97/112 (86%), Positives = 105/112 (93%) Frame = +1 Query: 1 SLDDDGFPFIGANLQSGDIVIGKCAESGADHSIKLKHTERGKVQKVILSANDEGTNFAAV 180 SLDDDGFPFIGANLQ+GDIVIG+CAESG DHSIKLKHTERG VQKV++SAND+G NFA V Sbjct: 878 SLDDDGFPFIGANLQNGDIVIGRCAESGVDHSIKLKHTERGMVQKVVVSANDDGKNFAVV 937 Query: 181 SLRQVRSPIVGDKFSSMHGQKGVIGLLESQENFPFTHQGIVPDIVINPHAFP 336 SLRQVR+P +GDKFSSMHGQKGV+G LESQENFPFT QGIVPDIVINPHAFP Sbjct: 938 SLRQVRTPCLGDKFSSMHGQKGVLGFLESQENFPFTIQGIVPDIVINPHAFP 989 Score = 153 bits (387), Expect(2) = 4e-90 Identities = 71/85 (83%), Positives = 80/85 (94%) Frame = +3 Query: 396 TRQTPGQLLEAALGKGIACGGLMRYATPFTTPSIDHITDQLHRAGYSRWGHERVYSGHYG 575 +RQTPGQLLEAALGKGIACGGL+R+ATPF+T S+D I DQLHRAG+SRWGHERVY+G G Sbjct: 990 SRQTPGQLLEAALGKGIACGGLLRHATPFSTLSVDAIADQLHRAGFSRWGHERVYNGRTG 1049 Query: 576 EMMRSLIFIGPTFYQRLIHMAEDKV 650 EM+RSLIF+GPTFYQRLIHMAEDKV Sbjct: 1050 EMLRSLIFMGPTFYQRLIHMAEDKV 1074 >ref|XP_004145500.1| PREDICTED: DNA-directed RNA polymerase D subunit 2a-like [Cucumis sativus] Length = 1197 Score = 204 bits (520), Expect(2) = 8e-90 Identities = 97/112 (86%), Positives = 106/112 (94%) Frame = +1 Query: 1 SLDDDGFPFIGANLQSGDIVIGKCAESGADHSIKLKHTERGKVQKVILSANDEGTNFAAV 180 SLDDDGFP+IGANLQSGDIVIG+CAESGADHSIKLKHTE+G VQKV+LS+ND+G N+A V Sbjct: 877 SLDDDGFPYIGANLQSGDIVIGRCAESGADHSIKLKHTEKGMVQKVVLSSNDDGKNYAVV 936 Query: 181 SLRQVRSPIVGDKFSSMHGQKGVIGLLESQENFPFTHQGIVPDIVINPHAFP 336 SLRQVRSP +GDKFSSMHGQKGV+G LESQENFPFT QGIVPDIVINPHAFP Sbjct: 937 SLRQVRSPCLGDKFSSMHGQKGVLGFLESQENFPFTIQGIVPDIVINPHAFP 988 Score = 152 bits (383), Expect(2) = 8e-90 Identities = 71/85 (83%), Positives = 79/85 (92%) Frame = +3 Query: 396 TRQTPGQLLEAALGKGIACGGLMRYATPFTTPSIDHITDQLHRAGYSRWGHERVYSGHYG 575 +RQTPGQLLEAALGKGIA GG ++YATPF+TPS+D ITDQLHRAG+SRWG ERVY+G G Sbjct: 989 SRQTPGQLLEAALGKGIAAGGSLKYATPFSTPSVDAITDQLHRAGFSRWGSERVYNGRTG 1048 Query: 576 EMMRSLIFIGPTFYQRLIHMAEDKV 650 EMMRSLIF+GPTFYQRLIHMAEDKV Sbjct: 1049 EMMRSLIFMGPTFYQRLIHMAEDKV 1073 >ref|XP_002515428.1| DNA-directed RNA polymerase subunit, putative [Ricinus communis] gi|223545372|gb|EEF46877.1| DNA-directed RNA polymerase subunit, putative [Ricinus communis] Length = 1203 Score = 207 bits (527), Expect(2) = 1e-89 Identities = 99/112 (88%), Positives = 105/112 (93%) Frame = +1 Query: 1 SLDDDGFPFIGANLQSGDIVIGKCAESGADHSIKLKHTERGKVQKVILSANDEGTNFAAV 180 SLDDDGFPFIGANLQSGDIVIG+CAESG DHSIKLKHTERG VQKV+LS+NDEG NFA V Sbjct: 883 SLDDDGFPFIGANLQSGDIVIGRCAESGPDHSIKLKHTERGMVQKVVLSSNDEGKNFAVV 942 Query: 181 SLRQVRSPIVGDKFSSMHGQKGVIGLLESQENFPFTHQGIVPDIVINPHAFP 336 SLRQVRSP +GDKFSSMHGQKGV+G LESQENFPFT QGIVPDIVINPH+FP Sbjct: 943 SLRQVRSPCLGDKFSSMHGQKGVLGFLESQENFPFTRQGIVPDIVINPHSFP 994 Score = 148 bits (374), Expect(2) = 1e-89 Identities = 69/85 (81%), Positives = 80/85 (94%) Frame = +3 Query: 396 TRQTPGQLLEAALGKGIACGGLMRYATPFTTPSIDHITDQLHRAGYSRWGHERVYSGHYG 575 +RQTPGQLLEAALGKGIACGG M+YATPF+T S++ IT+QLHRAG+SRWG+ERVY+G G Sbjct: 995 SRQTPGQLLEAALGKGIACGGSMKYATPFSTLSVEAITNQLHRAGFSRWGNERVYNGRTG 1054 Query: 576 EMMRSLIFIGPTFYQRLIHMAEDKV 650 EM+RSLIF+GPTFYQRLIHMAEDKV Sbjct: 1055 EMVRSLIFMGPTFYQRLIHMAEDKV 1079 >ref|XP_003523670.1| PREDICTED: DNA-directed RNA polymerase D subunit 2a-like [Glycine max] Length = 1205 Score = 207 bits (528), Expect(2) = 2e-89 Identities = 97/112 (86%), Positives = 107/112 (95%) Frame = +1 Query: 1 SLDDDGFPFIGANLQSGDIVIGKCAESGADHSIKLKHTERGKVQKVILSANDEGTNFAAV 180 SLDDDGFP++GANLQSGDI+IGKCAESGAD+S+KLKHTERG VQKV+LS+NDEG NFA V Sbjct: 885 SLDDDGFPYVGANLQSGDIIIGKCAESGADNSVKLKHTERGYVQKVVLSSNDEGKNFAVV 944 Query: 181 SLRQVRSPIVGDKFSSMHGQKGVIGLLESQENFPFTHQGIVPDIVINPHAFP 336 SLRQVRSP++GDKFSSMHGQKGV+G LESQENFPFT QGIVPDIVINPHAFP Sbjct: 945 SLRQVRSPVLGDKFSSMHGQKGVLGFLESQENFPFTRQGIVPDIVINPHAFP 996 Score = 147 bits (372), Expect(2) = 2e-89 Identities = 67/85 (78%), Positives = 80/85 (94%) Frame = +3 Query: 396 TRQTPGQLLEAALGKGIACGGLMRYATPFTTPSIDHITDQLHRAGYSRWGHERVYSGHYG 575 +RQTPGQLLEAALGKGIACGG+++ ATPF+TPS+D IT+QLHRAG+SRWG+ERVY+G G Sbjct: 997 SRQTPGQLLEAALGKGIACGGILKQATPFSTPSVDAITEQLHRAGFSRWGNERVYNGRTG 1056 Query: 576 EMMRSLIFIGPTFYQRLIHMAEDKV 650 EM+RSLIF+GPTFYQRL HM+EDKV Sbjct: 1057 EMVRSLIFMGPTFYQRLHHMSEDKV 1081