BLASTX nr result

ID: Coptis21_contig00004564 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00004564
         (1317 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280187.1| PREDICTED: uncharacterized protein LOC100260...   170   7e-40
ref|XP_002311204.1| predicted protein [Populus trichocarpa] gi|2...   159   2e-36
gb|ABK92946.1| unknown [Populus trichocarpa]                          159   2e-36
ref|XP_002526856.1| protein with unknown function [Ricinus commu...   156   1e-35
ref|XP_002279465.1| PREDICTED: uncharacterized protein LOC100266...   151   3e-34

>ref|XP_002280187.1| PREDICTED: uncharacterized protein LOC100260337 [Vitis vinifera]
            gi|297745939|emb|CBI15995.3| unnamed protein product
            [Vitis vinifera]
          Length = 315

 Score =  170 bits (431), Expect = 7e-40
 Identities = 118/334 (35%), Positives = 150/334 (44%), Gaps = 5/334 (1%)
 Frame = -2

Query: 1247 KIPYPPPHPNQKMSSSSRFSTHPLDLDITIITAKHLKNVNWRHGELKPYVTISIDPTRRI 1068
            +I  PPP P  K+          +DLD+TI++AKHLKNVNWR+G+LKPY    +DP RR 
Sbjct: 5    RIQPPPPPPQSKL----------MDLDVTIVSAKHLKNVNWRNGDLKPYAIFWVDPERRF 54

Query: 1067 TTKPSDDINTNRPIWNERFIIPINIPLHDAXXXXXXXXXXXSQTPSLKSVGSVQFPLKEL 888
             TKP DD  + RP+WNE F IPIN P +D+           S+TP    VG ++FP+K+L
Sbjct: 55   ATKP-DDCGSTRPVWNEHFSIPINTPPYDSVFTLEIFHSKPSETPK-PLVGVLRFPIKDL 112

Query: 887  ISNSDESNTIRVLELRRPSGRPQGKIRVKLGLXXXXXXXXXXXXXXXXXXXXXPNYYNPS 708
            + + + +N+IR LELRRPSGRP GKIR+KL L                      +YY  S
Sbjct: 113  VDSDESANSIRTLELRRPSGRPNGKIRIKLAL------RERPPPTPDYHIAPQSSYYYSS 166

Query: 707  TLP-----RDYRNXXXXXXXXXXXXXXXXXXXXXXXXXYTNYSDPNXXXXXXXXXXXXXX 543
              P     RDYR                             YSDP               
Sbjct: 167  APPPPPPARDYRGFSSSPYTTHPPPPAPAPSSAAPYSYG-GYSDP-----YSGYYGYYSQ 220

Query: 542  XXXXXXXXLFDQGMRSYDGHSGPSAPVDYSSTYEQXXXXXXXXXXXXXXXXXXXXXXXXX 363
                     F     +Y    GPSAPVDYS+ YE                          
Sbjct: 221  QPPVPPPRPFFDRPSNYGVPGGPSAPVDYSA-YEH---KPKGSGKMGLGTGLAVGAVAGA 276

Query: 362  XXXXXXXXXLKYEEGKIADKVENELEGRDEYSDY 261
                     +KYEE K+AD+VEN+L  RD+YSDY
Sbjct: 277  LGGLALEEGIKYEEEKVADRVENDLSARDDYSDY 310


>ref|XP_002311204.1| predicted protein [Populus trichocarpa] gi|222851024|gb|EEE88571.1|
            predicted protein [Populus trichocarpa]
          Length = 311

 Score =  159 bits (402), Expect = 2e-36
 Identities = 111/310 (35%), Positives = 145/310 (46%), Gaps = 2/310 (0%)
 Frame = -2

Query: 1181 PLDLDITIITAKHLKNVNWRHGELKPYVTISIDPTRRITTKPSDDINTNRPIWNERFIIP 1002
            PLDLD+TII+AKHLKNVNW+ G+LKPY    +DP+RR++TK SD+  + RP+WNERF +P
Sbjct: 11   PLDLDLTIISAKHLKNVNWKTGDLKPYAVFWVDPSRRLSTK-SDESGSTRPVWNERFTLP 69

Query: 1001 INIPLHDAXXXXXXXXXXXSQTPSLKSVGSVQFPLKELISNSDESNTIRVLELRRPSGRP 822
            +   L D+           S+TP    VG+++  LK+L S+ D+SN +R LEL RPSGRP
Sbjct: 70   LTFALRDSFLTLEIFHSKPSETPK-PLVGTLRVALKDL-SDPDDSNRVRTLELTRPSGRP 127

Query: 821  QGKIRVKLGLXXXXXXXXXXXXXXXXXXXXXPNYYNPSTL--PRDYRNXXXXXXXXXXXX 648
            QGKIR+KLG+                       YY+ + +  P DYR             
Sbjct: 128  QGKIRIKLGVRERPFSPHPPPQPVYGITAPQSYYYSGAAIPPPPDYRRLSMALPASLSPP 187

Query: 647  XXXXXXXXXXXXXYTNYSDPNXXXXXXXXXXXXXXXXXXXXXXLFDQGMRSYDGHSGPSA 468
                            Y  P                         D+ M SY   SGPSA
Sbjct: 188  PPPAPHYGPYHDA---YPPP-----YYPGYHSSAPPPPTQPRPFLDRTMGSYG--SGPSA 237

Query: 467  PVDYSSTYEQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLKYEEGKIADKVENEL 288
            PVDY S Y+                                   LK+E+ KIA+KVEN+L
Sbjct: 238  PVDYGS-YDTQRERHKGGKSMGFGTGLAVGAVAGALGGLALEEGLKHEDEKIAEKVENDL 296

Query: 287  EGRDEYSDYR 258
              RD+YSDYR
Sbjct: 297  ATRDDYSDYR 306


>gb|ABK92946.1| unknown [Populus trichocarpa]
          Length = 311

 Score =  159 bits (401), Expect = 2e-36
 Identities = 111/310 (35%), Positives = 145/310 (46%), Gaps = 2/310 (0%)
 Frame = -2

Query: 1181 PLDLDITIITAKHLKNVNWRHGELKPYVTISIDPTRRITTKPSDDINTNRPIWNERFIIP 1002
            PLDLD+TII+AKHLKNVNW+ G+LKPY    +DP+RR++TK SD+  + RP+WNERF +P
Sbjct: 11   PLDLDLTIISAKHLKNVNWKTGDLKPYAVFWVDPSRRLSTK-SDESGSTRPVWNERFTLP 69

Query: 1001 INIPLHDAXXXXXXXXXXXSQTPSLKSVGSVQFPLKELISNSDESNTIRVLELRRPSGRP 822
            +   L D+           S+TP    VG+++  LK+L S+ D+SN +R LEL RPSGRP
Sbjct: 70   LTFALRDSFLTLEIFHSKPSETPK-PLVGTLRVALKDL-SDPDDSNRVRTLELTRPSGRP 127

Query: 821  QGKIRVKLGLXXXXXXXXXXXXXXXXXXXXXPNYYNPSTL--PRDYRNXXXXXXXXXXXX 648
            QGKIR+KLG+                       YY+ + +  P DYR             
Sbjct: 128  QGKIRIKLGVRERPFSPHPPPQPVYGITAPQSYYYSGAAVPPPPDYRRLSMALPASLSPP 187

Query: 647  XXXXXXXXXXXXXYTNYSDPNXXXXXXXXXXXXXXXXXXXXXXLFDQGMRSYDGHSGPSA 468
                            Y  P                         D+ M SY   SGPSA
Sbjct: 188  PPPAPHYGPYHDA---YPPP-----YYPGYHSSAPPPPTQPRPFLDRTMGSYG--SGPSA 237

Query: 467  PVDYSSTYEQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLKYEEGKIADKVENEL 288
            PVDY S Y+                                   LK+E+ KIA+KVEN+L
Sbjct: 238  PVDYGS-YDTQRERHKGGKSMGFGTGLAVGAVAGALGGLALEEGLKHEDEKIAEKVENDL 296

Query: 287  EGRDEYSDYR 258
              RD+YSDYR
Sbjct: 297  ATRDDYSDYR 306


>ref|XP_002526856.1| protein with unknown function [Ricinus communis]
            gi|223533755|gb|EEF35487.1| protein with unknown function
            [Ricinus communis]
          Length = 312

 Score =  156 bits (394), Expect = 1e-35
 Identities = 116/329 (35%), Positives = 152/329 (46%), Gaps = 11/329 (3%)
 Frame = -2

Query: 1211 MSSSSRFSTHPLDLDITIITAKHLKNVNWRHGELKPYVTISIDPTRRITTKPSDDINTNR 1032
            M++S      PLDLD+TI++AKHLKNVNW++G+LK Y    +DP RR+ TK SDD  + R
Sbjct: 1    MATSRPPPPKPLDLDLTIVSAKHLKNVNWKNGDLKAYAVFWVDPDRRLATK-SDDSGSTR 59

Query: 1031 PIWNERFIIPINIPLHDAXXXXXXXXXXXSQTPSLKSVGSVQFPLKELISNSDESNTIRV 852
            P+WNERF +P+++PLHD+           S+TP    VG+++  LK+L  + D+S  IR 
Sbjct: 60   PVWNERFTLPLSLPLHDSYFTLEIFHSKPSETPK-PLVGTLRVGLKDLF-DPDDSTRIRT 117

Query: 851  LELRRPSGRPQGKIRVKLGLXXXXXXXXXXXXXXXXXXXXXPN--YYNPSTL---PRDYR 687
             EL RPSGRPQGKIR+K+G                      P   YYN + +   PRDYR
Sbjct: 118  FELTRPSGRPQGKIRIKIGFRERPLPPPPPPPQVQDYHITPPQSYYYNTAPMPPAPRDYR 177

Query: 686  NXXXXXXXXXXXXXXXXXXXXXXXXXYTNYSDPNXXXXXXXXXXXXXXXXXXXXXXLFDQ 507
                                         YS                         LFD+
Sbjct: 178  YGTASPPPPPPSLQYSSYHHDTYTAPSPYYS-------------GYYSAPPMPPRPLFDR 224

Query: 506  GMRSYDGHSGPSAPVDYS-----STYEQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 342
                Y G  GPSAPVDYS     S Y+Q                                
Sbjct: 225  NNSGYSG--GPSAPVDYSVSAPASPYDQ--RQRGVGGKAGFGTGLAVGAIAGALGGIAIE 280

Query: 341  XXLKYEEGKIADKVENELEG-RDEYSDYR 258
              LKYEE KIA++VE+++ G RD+YSDYR
Sbjct: 281  EGLKYEEEKIAERVEHDIAGSRDDYSDYR 309


>ref|XP_002279465.1| PREDICTED: uncharacterized protein LOC100266706 [Vitis vinifera]
          Length = 267

 Score =  151 bits (382), Expect = 3e-34
 Identities = 72/133 (54%), Positives = 98/133 (73%)
 Frame = -2

Query: 1190 STHPLDLDITIITAKHLKNVNWRHGELKPYVTISIDPTRRITTKPSDDINTNRPIWNERF 1011
            S+ PLD+D+T+++AKHL+NVNW+HGELKPY    +DP RR+ TKP D+  +  P+WNERF
Sbjct: 3    SSRPLDIDLTVVSAKHLQNVNWKHGELKPYAIFWVDPDRRLATKP-DESGSTCPVWNERF 61

Query: 1010 IIPINIPLHDAXXXXXXXXXXXSQTPSLKSVGSVQFPLKELISNSDESNTIRVLELRRPS 831
             + +N+PLHD+           S+TP    VGS+Q PLK+L+ +SD+SN I+  +LRRPS
Sbjct: 62   TVSVNLPLHDSVLTLEVFHSKPSETPK-PLVGSLQVPLKDLV-DSDDSNRIKTFQLRRPS 119

Query: 830  GRPQGKIRVKLGL 792
            GRPQGKIRVKL +
Sbjct: 120  GRPQGKIRVKLAI 132


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