BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00004560
         (1221 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264387.1| PREDICTED: protein farnesyltransferase/geran...   487   e-135
ref|XP_002534116.1| protein farnesyltransferase alpha subunit, p...   485   e-134
ref|NP_001240249.1| uncharacterized protein LOC100790130 [Glycin...   473   e-131
emb|CAN69481.1| hypothetical protein VITISV_017351 [Vitis vinifera]   473   e-131
gb|ACU24085.1| unknown [Glycine max]                                  469   e-130

>ref|XP_002264387.1| PREDICTED: protein farnesyltransferase/geranylgeranyltransferase
            type-1 subunit alpha [Vitis vinifera]
            gi|297743768|emb|CBI36651.3| unnamed protein product
            [Vitis vinifera]
          Length = 331

 Score =  487 bits (1253), Expect = e-135
 Identities = 222/319 (69%), Positives = 264/319 (82%)
 Frame = +3

Query: 156  PLSQRAEWSDVNPVPQDDGPNPVVPIAYRDDFRETMDYFRAVYLADERTFRSLDLTTEAI 335
            PLSQR EWSDV PVPQDDGPNPVVPIAY+DDF ETMDYFRAVY ADER+ RSL +T EAI
Sbjct: 11   PLSQRPEWSDVTPVPQDDGPNPVVPIAYKDDFTETMDYFRAVYFADERSLRSLHVTAEAI 70

Query: 336  HFNAGNYTVWHFRRLVLETLGVDLHDELSFVESIAKVNSKNYQIWHHRRWVAEKLGTEVT 515
            H NAGNYTVWHFRRL+L  L  DLH+EL+F++ +A  N KNYQIWHHRRWVAEKLG++ T
Sbjct: 71   HMNAGNYTVWHFRRLILGALNADLHEELNFIKKVANGNPKNYQIWHHRRWVAEKLGSDAT 130

Query: 516  GLELEFTKNILSLDAKNYHAWSHRQWVLQALGGWEGELDYCHKLLEEDVFNNSAWNQRHF 695
              EL+FTK ILSLDAKNYHAWSHRQWVLQ LGGWE ELDYC +LLE+D+FNNSAWNQR+F
Sbjct: 131  SKELDFTKKILSLDAKNYHAWSHRQWVLQELGGWEDELDYCKQLLEDDIFNNSAWNQRYF 190

Query: 696  VVTRSPLLGGPEAMRDSEVKYTIEAILSNPENESPWRYLRGLYKGDTPSFIHDPEISSML 875
            V+T+SP LGG EAMR+SEV YT+ AI++ PENESPWRYLRGLYK D  S+++DP++SS+ 
Sbjct: 191  VITKSPFLGGLEAMRESEVNYTVGAIIAKPENESPWRYLRGLYKDDAQSWVNDPQVSSVC 250

Query: 876  LKVLKNKSNYVFALSLLLDLVCLGFEPSEEIIHAVEPLRTSHPDPPDVNVARTICSVLET 1055
            L VL  K N VFALS LLDL+C GF+PS++ I+AV+ L+T   D  D N+A  +CSVL  
Sbjct: 251  LTVLSAKRNTVFALSTLLDLLCHGFQPSQDFINAVDALKTPDLDQSDSNLATAVCSVLGH 310

Query: 1056 VDPMRSNYWTWRRSNIASQ 1112
            +DPMR NYW WR++ + +Q
Sbjct: 311  MDPMRVNYWAWRKNKLPAQ 329


>ref|XP_002534116.1| protein farnesyltransferase alpha subunit, putative [Ricinus
            communis] gi|223525828|gb|EEF28267.1| protein
            farnesyltransferase alpha subunit, putative [Ricinus
            communis]
          Length = 333

 Score =  485 bits (1248), Expect = e-134
 Identities = 219/317 (69%), Positives = 274/317 (86%)
 Frame = +3

Query: 153  IPLSQRAEWSDVNPVPQDDGPNPVVPIAYRDDFRETMDYFRAVYLADERTFRSLDLTTEA 332
            +PLSQR EWSDV PV QDDGPNPVVPIAY+ +F ETM+YFRA+YL+DER+ R+L LT   
Sbjct: 13   VPLSQRPEWSDVIPVQQDDGPNPVVPIAYKPEFEETMNYFRAIYLSDERSPRALQLTHLV 72

Query: 333  IHFNAGNYTVWHFRRLVLETLGVDLHDELSFVESIAKVNSKNYQIWHHRRWVAEKLGTEV 512
            I  N GNYTVWHFRRLVLE L  +L++EL ++E +AK N+KNYQIWHHRRWVAEKLGT+ 
Sbjct: 73   ILLNPGNYTVWHFRRLVLEALNAELYEELDYIERVAKKNTKNYQIWHHRRWVAEKLGTDA 132

Query: 513  TGLELEFTKNILSLDAKNYHAWSHRQWVLQALGGWEGELDYCHKLLEEDVFNNSAWNQRH 692
               EL+FT+ ILSLDAKNYHAWSHRQWVLQALGGWE ELDYC +LLE DVFNNSAWNQR+
Sbjct: 133  AAKELQFTRKILSLDAKNYHAWSHRQWVLQALGGWEDELDYCRQLLEHDVFNNSAWNQRY 192

Query: 693  FVVTRSPLLGGPEAMRDSEVKYTIEAILSNPENESPWRYLRGLYKGDTPSFIHDPEISSM 872
            F++TRSPLLGG +A+R+SE+K+T+EAIL+NPENESPWRYLRGLY+GDT S+I+DP++SS+
Sbjct: 193  FIITRSPLLGGLKAVRESEMKFTVEAILANPENESPWRYLRGLYQGDTQSWINDPQVSSV 252

Query: 873  LLKVLKNKSNYVFALSLLLDLVCLGFEPSEEIIHAVEPLRTSHPDPPDVNVARTICSVLE 1052
             LKVL  K+N++FALS+LLDL+C GF+ ++EI  +V+ LRTS+ DPP+ ++A+ +CS+LE
Sbjct: 253  CLKVLSAKTNHIFALSMLLDLLCHGFQANQEIRDSVDALRTSNCDPPEPDLAKAVCSLLE 312

Query: 1053 TVDPMRSNYWTWRRSNI 1103
             VDPMR+NYW WR+S +
Sbjct: 313  HVDPMRANYWIWRKSKL 329


>ref|NP_001240249.1| uncharacterized protein LOC100790130 [Glycine max]
            gi|255641545|gb|ACU21046.1| unknown [Glycine max]
          Length = 346

 Score =  473 bits (1218), Expect = e-131
 Identities = 217/329 (65%), Positives = 270/329 (82%), Gaps = 11/329 (3%)
 Frame = +3

Query: 150  RIPLSQRAEWSDVNPVPQDDGPNPVVPIAYRDDFRETMDYFRAVYLADERTFRSLDLTTE 329
            R+PL +R EWSDV PVPQ+DGPNPVVPI Y ++F E MDYFRAVYL DER+ R+L LT E
Sbjct: 14   RVPLRERVEWSDVTPVPQNDGPNPVVPIQYTEEFSEVMDYFRAVYLTDERSPRALALTAE 73

Query: 330  AIHFNAGNYTVWHFRRLVLETLGVDLHDELSFVESIAKVNSKNYQIWHHRRWVAEKLGTE 509
            A+ FN+GNYTVWHFRRL+LE+L VDL+DEL FVE +A  NSKNYQ+WHHRRWVAEKLG E
Sbjct: 74   AVQFNSGNYTVWHFRRLLLESLKVDLNDELEFVERMAAGNSKNYQMWHHRRWVAEKLGPE 133

Query: 510  VTGLELEFTKNILSLDAKNYHAWSHRQWVLQALGGWEGELDYCHKLLEEDVFNNSAWNQR 689
                ELEFTK ILS+DAK+YHAWSHRQW LQ LGGWE EL+YC +LL+ED+FNNSAWNQR
Sbjct: 134  ARNNELEFTKKILSVDAKHYHAWSHRQWALQTLGGWEDELNYCTELLKEDIFNNSAWNQR 193

Query: 690  HFVVTRSPLLGGPEAMRDSEVKYTIEAILSNPENESPWRYLRGLYKGDTPSFIHDPEISS 869
            +FV+TRSP LGG +AMR+SEV YTIEAI++ PENES WRYLRGLYKG+T S+++DP++SS
Sbjct: 194  YFVITRSPFLGGLKAMRESEVLYTIEAIIAYPENESSWRYLRGLYKGETTSWVNDPQVSS 253

Query: 870  MLLKVLKNKSNYVFALSLLLDLVCLGFEPSEEIIHAVEPLRTSHPDPPD----------- 1016
            + LK+L+ KSNYVFALS +LDL+C G++P+E+I  A++ L+T+  D  D           
Sbjct: 254  VCLKILRTKSNYVFALSTILDLICFGYQPNEDIRDAIDALKTADMDKQDLDDDEKGEQQN 313

Query: 1017 VNVARTICSVLETVDPMRSNYWTWRRSNI 1103
            +N+AR ICS+L+ VDP+R+NYW WR+S +
Sbjct: 314  LNIARNICSILKQVDPIRTNYWIWRKSRL 342


>emb|CAN69481.1| hypothetical protein VITISV_017351 [Vitis vinifera]
          Length = 362

 Score =  473 bits (1218), Expect = e-131
 Identities = 223/350 (63%), Positives = 265/350 (75%), Gaps = 31/350 (8%)
 Frame = +3

Query: 156  PLSQRAEWSDVNPVPQDDGPNPVVPIAYRDDFRETMDYFRAVYLADERTFRSLDLTTEAI 335
            PLSQR EWSDV PVPQDDGPNPVVPIAY+DDF ETMDYFRAVY ADER+ RSL +T EAI
Sbjct: 11   PLSQRPEWSDVTPVPQDDGPNPVVPIAYKDDFTETMDYFRAVYFADERSLRSLHVTAEAI 70

Query: 336  HFNAGNYTV-------------------------------WHFRRLVLETLGVDLHDELS 422
            H NAGNYTV                               WHFRRL+LE L  DLH+EL+
Sbjct: 71   HMNAGNYTVTLSNLDFDFAENLFLENEAIGRIASRVEAVVWHFRRLILEALNADLHEELN 130

Query: 423  FVESIAKVNSKNYQIWHHRRWVAEKLGTEVTGLELEFTKNILSLDAKNYHAWSHRQWVLQ 602
            F++ +A  N KNYQIWHHRRWVAEKLG++ T  EL+FTK ILSLDAKNYHAWSHRQWVLQ
Sbjct: 131  FIKKVANGNPKNYQIWHHRRWVAEKLGSDATSKELDFTKKILSLDAKNYHAWSHRQWVLQ 190

Query: 603  ALGGWEGELDYCHKLLEEDVFNNSAWNQRHFVVTRSPLLGGPEAMRDSEVKYTIEAILSN 782
             LGGWE ELDYC +LLE+D+FNNSAWNQR+FV+T+SP LGG EAMR+SEV YT+ AI++ 
Sbjct: 191  ELGGWEDELDYCKQLLEDDIFNNSAWNQRYFVITKSPFLGGLEAMRESEVNYTVGAIIAK 250

Query: 783  PENESPWRYLRGLYKGDTPSFIHDPEISSMLLKVLKNKSNYVFALSLLLDLVCLGFEPSE 962
            PENESPWRYLRGLYK D  S+++DP++SS+ L VL  K N VFALS LLDL+C GF+PS+
Sbjct: 251  PENESPWRYLRGLYKDDAQSWVNDPQVSSVCLTVLSAKRNTVFALSTLLDLLCHGFQPSQ 310

Query: 963  EIIHAVEPLRTSHPDPPDVNVARTICSVLETVDPMRSNYWTWRRSNIASQ 1112
            + I+AV+ L+T   D  D N+A  +CSVL  +DPMR NYW WR++ + +Q
Sbjct: 311  DFINAVDALKTPDLDQSDSNLATAVCSVLGHMDPMRVNYWAWRKNKLPAQ 360


>gb|ACU24085.1| unknown [Glycine max]
          Length = 340

 Score =  469 bits (1208), Expect = e-130
 Identities = 217/329 (65%), Positives = 271/329 (82%), Gaps = 11/329 (3%)
 Frame = +3

Query: 150  RIPLSQRAEWSDVNPVPQDDGPNPVVPIAYRDDFRETMDYFRAVYLADERTFRSLDLTTE 329
            R+PL +RAEWSDV P+PQ+DGPNPVVPI Y +DF + MDYFRAVYLADER+ R+L LT E
Sbjct: 8    RVPLRERAEWSDVTPLPQNDGPNPVVPIQYTEDFSQVMDYFRAVYLADERSPRALALTAE 67

Query: 330  AIHFNAGNYTVWHFRRLVLETLGVDLHDELSFVESIAKVNSKNYQIWHHRRWVAEKLGTE 509
            A+ FN+GNYTVWHFRRL+LE+L VDL+ EL FVE +A  NSKNYQ+WHHRRWVAEKLG E
Sbjct: 68   AVQFNSGNYTVWHFRRLLLESLKVDLNAELDFVERMAAGNSKNYQMWHHRRWVAEKLGPE 127

Query: 510  VTGLELEFTKNILSLDAKNYHAWSHRQWVLQALGGWEGELDYCHKLLEEDVFNNSAWNQR 689
                ELEFTK ILS+DAK+YHAWSHRQWVLQALGGWE EL+YC +LL+ED+FNNSAWNQR
Sbjct: 128  ARKNELEFTKKILSVDAKHYHAWSHRQWVLQALGGWEDELNYCTELLKEDIFNNSAWNQR 187

Query: 690  HFVVTRSPLLGGPEAMRDSEVKYTIEAILSNPENESPWRYLRGLYKGDTPSFIHDPEISS 869
            +FV+TRSP LGG +AMR+SEV YTIEAI++ PENES WRYLRGLYKG+T S+++DP++SS
Sbjct: 188  YFVITRSPFLGGLKAMRESEVLYTIEAIIAYPENESSWRYLRGLYKGETTSWVNDPQVSS 247

Query: 870  MLLKVLKNKSNYVFALSLLLDLVCLGFEPSEEIIHAVEPLRTSHPD-----------PPD 1016
            + LK+L+ KSNYVFALS +LDL+C G+ P+E+   A++ L+T+  D             +
Sbjct: 248  VCLKILRTKSNYVFALSTILDLICFGYLPNEDFRDAIDALKTADMDKQNLDDNEKGEQQN 307

Query: 1017 VNVARTICSVLETVDPMRSNYWTWRRSNI 1103
            +N+A+ ICS+LE VDP+R+NYW WR+S +
Sbjct: 308  LNIAQNICSILEQVDPIRTNYWIWRKSRL 336