BLASTX nr result

ID: Coptis21_contig00004546 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00004546
         (1059 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270724.1| PREDICTED: transforming growth factor-beta r...   466   e-129
ref|XP_002303701.1| predicted protein [Populus trichocarpa] gi|2...   459   e-127
ref|XP_002523291.1| conserved hypothetical protein [Ricinus comm...   454   e-125
ref|XP_003521040.1| PREDICTED: transforming growth factor-beta r...   422   e-116
ref|XP_003530110.1| PREDICTED: transforming growth factor-beta r...   419   e-115

>ref|XP_002270724.1| PREDICTED: transforming growth factor-beta receptor-associated
            protein 1 homolog [Vitis vinifera]
            gi|302143252|emb|CBI20547.3| unnamed protein product
            [Vitis vinifera]
          Length = 1011

 Score =  466 bits (1198), Expect = e-129
 Identities = 231/352 (65%), Positives = 283/352 (80%)
 Frame = -1

Query: 1056 VDGVKSMVWINDSIIVGTGNGYMLFSCVNGQXXXXXXXXXXXXXXPYLKCLGKECEALLL 877
            VDGV++MVWI+DSII+GT +GY L SCV+GQ               +LK L KE + LLL
Sbjct: 237  VDGVRTMVWIDDSIIIGTSSGYSLISCVSGQCSVLFSLPDPTSMP-HLKLLRKEHKVLLL 295

Query: 876  VDNVGIVVNAVGEPLGGSLIFQRTPSSVGEISTYLVAVNDGRMDLYHKKTGLCVQSVSFA 697
            VDNVGI+VNA G+P+GGSL+F+  P SVGEIS+Y+V  +DG+M+LYHKK+G+C+Q  S A
Sbjct: 296  VDNVGIIVNAYGQPVGGSLVFRHFPDSVGEISSYVVVASDGKMELYHKKSGVCIQMASVA 355

Query: 696  EQGVGPCIVANEESRNGEVIVVASPSKVICFRKIGAKDQIKDLLRKKRFXXXXXXXXXXX 517
             +G G  +VA+ E  +G ++VVA+PSKVIC+RK+ +++QIKDLLRKK F           
Sbjct: 356  AEGSGMSVVADAEDASGNLVVVATPSKVICYRKVPSEEQIKDLLRKKNFKEAITLVEELE 415

Query: 516  XXXEMTKEMLSYVHAQVGFLLLFNLHFEEAVNHFLQSETMQPSEIFPFILPDPNRWSMQV 337
               EMTKEMLS+VHAQVGFLLLF+LHFEEAV+HFLQSETMQPSEIFPFI+ DPNRWS+ V
Sbjct: 416  SEGEMTKEMLSFVHAQVGFLLLFDLHFEEAVDHFLQSETMQPSEIFPFIMRDPNRWSLLV 475

Query: 336  PRNRYWGLHPPPVPLEDVIDDGLNAIQRAIYLRKAGAETAVDEYFLMNPPNRANLLESAI 157
            PRNRYWGLHPPP PLEDV+DDGL AIQRAI+LRKAG ET VD+ FL+NPP+RA+LLESAI
Sbjct: 476  PRNRYWGLHPPPAPLEDVVDDGLKAIQRAIFLRKAGVETPVDDDFLLNPPSRADLLESAI 535

Query: 156  ENIIRYLRLSRDKALAPPVREGVDTLLMYLYRALNLVEEMELLASSENNCVV 1
            +NIIRYL++SR + L   VREGVDTLLMYLYRALN V++ME LASSEN+C+V
Sbjct: 536  KNIIRYLQVSRRRDLTLSVREGVDTLLMYLYRALNSVDDMEKLASSENSCIV 587


>ref|XP_002303701.1| predicted protein [Populus trichocarpa] gi|222841133|gb|EEE78680.1|
            predicted protein [Populus trichocarpa]
          Length = 799

 Score =  459 bits (1181), Expect = e-127
 Identities = 225/353 (63%), Positives = 280/353 (79%)
 Frame = -1

Query: 1059 CVDGVKSMVWINDSIIVGTGNGYMLFSCVNGQXXXXXXXXXXXXXXPYLKCLGKECEALL 880
            C+DGVK++VWINDSIIVGT  GY LFSC+ GQ                LK L KE + LL
Sbjct: 24   CIDGVKTLVWINDSIIVGTVIGYSLFSCITGQSGVIFTLPDVSCLPL-LKLLWKEKKVLL 82

Query: 879  LVDNVGIVVNAVGEPLGGSLIFQRTPSSVGEISTYLVAVNDGRMDLYHKKTGLCVQSVSF 700
            LVDNVGIVV+A G+P+GGSL+F++ P SVGE+++Y++ V DG+M+LYHKK G CVQ+VSF
Sbjct: 83   LVDNVGIVVDAHGQPVGGSLVFRKGPDSVGELASYVMVVRDGKMELYHKKLGGCVQTVSF 142

Query: 699  AEQGVGPCIVANEESRNGEVIVVASPSKVICFRKIGAKDQIKDLLRKKRFXXXXXXXXXX 520
              +G GPCIVA+EES NG+++ VA+P+KVI +R++  ++QIKDLLRKK F          
Sbjct: 143  GSEGFGPCIVADEESGNGKLVAVATPTKVIFYRRVPTEEQIKDLLRKKNFKEAVSLVEEL 202

Query: 519  XXXXEMTKEMLSYVHAQVGFLLLFNLHFEEAVNHFLQSETMQPSEIFPFILPDPNRWSMQ 340
                E++ EMLS+VHAQ+GFLLLF+LHFEEAVNHFLQSETMQPSE+FPFI+ DPNRWS+ 
Sbjct: 203  KSDGEISNEMLSFVHAQIGFLLLFDLHFEEAVNHFLQSETMQPSEVFPFIMRDPNRWSLL 262

Query: 339  VPRNRYWGLHPPPVPLEDVIDDGLNAIQRAIYLRKAGAETAVDEYFLMNPPNRANLLESA 160
            VPRNRYWGLHPPP PLEDV+DDGL AIQRAI+L+KAG +T VDE FL+NPP RA+LLE A
Sbjct: 263  VPRNRYWGLHPPPAPLEDVVDDGLMAIQRAIFLKKAGVDTTVDEDFLLNPPTRADLLELA 322

Query: 159  IENIIRYLRLSRDKALAPPVREGVDTLLMYLYRALNLVEEMELLASSENNCVV 1
            I+N+ RYL +SR+K L   V+EGVDTLLMYLYRALN +++ME LASS N+C+V
Sbjct: 323  IKNMSRYLEVSREKELTLSVKEGVDTLLMYLYRALNRIDDMEKLASSGNSCIV 375


>ref|XP_002523291.1| conserved hypothetical protein [Ricinus communis]
            gi|223537465|gb|EEF39092.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 1005

 Score =  454 bits (1168), Expect = e-125
 Identities = 222/353 (62%), Positives = 278/353 (78%)
 Frame = -1

Query: 1059 CVDGVKSMVWINDSIIVGTGNGYMLFSCVNGQXXXXXXXXXXXXXXPYLKCLGKECEALL 880
            C+DGVK++VW+NDSIIVG  NGY LFSC+ GQ                LK L KE + L+
Sbjct: 230  CIDGVKTIVWLNDSIIVGAVNGYSLFSCITGQSGVIFTLPDLCSPPQ-LKLLWKEKKVLM 288

Query: 879  LVDNVGIVVNAVGEPLGGSLIFQRTPSSVGEISTYLVAVNDGRMDLYHKKTGLCVQSVSF 700
            LVDNVGIVVN  G+P+GGSLIF+ +P SVGE+S+ +V V DG+M+LY+K++G C+Q++ F
Sbjct: 289  LVDNVGIVVNEHGQPVGGSLIFRHSPDSVGELSSCVVVVRDGKMELYNKRSGSCIQTLIF 348

Query: 699  AEQGVGPCIVANEESRNGEVIVVASPSKVICFRKIGAKDQIKDLLRKKRFXXXXXXXXXX 520
              +GVGPC+VANEE  +G++I+ A+ +KV C+ K+  ++QIKDLLRKK F          
Sbjct: 349  GAEGVGPCVVANEECGDGKLIIAATTTKVFCYSKVSCEEQIKDLLRKKNFKEAISLLEEL 408

Query: 519  XXXXEMTKEMLSYVHAQVGFLLLFNLHFEEAVNHFLQSETMQPSEIFPFILPDPNRWSMQ 340
                EM+ EMLS+VHAQVGFLLLF+L FEEAVNHFLQSETMQPSE+FPFI+ DPNRWS+ 
Sbjct: 409  ESEGEMSNEMLSFVHAQVGFLLLFDLQFEEAVNHFLQSETMQPSEVFPFIMQDPNRWSLL 468

Query: 339  VPRNRYWGLHPPPVPLEDVIDDGLNAIQRAIYLRKAGAETAVDEYFLMNPPNRANLLESA 160
            VPRNRYWGLHPPP PLEDV+DDGL AIQRAI+LRKAG +T+VD  F++NPP R++LLESA
Sbjct: 469  VPRNRYWGLHPPPAPLEDVVDDGLMAIQRAIFLRKAGVDTSVDNAFILNPPTRSDLLESA 528

Query: 159  IENIIRYLRLSRDKALAPPVREGVDTLLMYLYRALNLVEEMELLASSENNCVV 1
            I++IIRYL +SR+K LA  VREGVDTLLMYLYRAL+ V +ME LASSEN+C+V
Sbjct: 529  IKHIIRYLEVSREKELALSVREGVDTLLMYLYRALDRVYDMERLASSENSCIV 581


>ref|XP_003521040.1| PREDICTED: transforming growth factor-beta receptor-associated
            protein 1-like [Glycine max]
          Length = 968

 Score =  422 bits (1084), Expect = e-116
 Identities = 215/354 (60%), Positives = 263/354 (74%), Gaps = 1/354 (0%)
 Frame = -1

Query: 1059 CVDGVKS-MVWINDSIIVGTGNGYMLFSCVNGQXXXXXXXXXXXXXXPYLKCLGKECEAL 883
            CVDGV S MVW+NDSI+VGT NGY L SCV GQ                LK L KE   L
Sbjct: 216  CVDGVVSAMVWLNDSIVVGTVNGYSLISCVTGQSSVIFSLPDVSWPPR-LKLLHKEWRVL 274

Query: 882  LLVDNVGIVVNAVGEPLGGSLIFQRTPSSVGEISTYLVAVNDGRMDLYHKKTGLCVQSVS 703
            LLVDNVG++V+  G+P+GGSL+F+    S+GEI +Y+V V+DG++ LYHK+ G CVQ + 
Sbjct: 275  LLVDNVGVIVDPHGQPVGGSLVFRHGLDSMGEIDSYVVVVSDGKIGLYHKRHGGCVQVLP 334

Query: 702  FAEQGVGPCIVANEESRNGEVIVVASPSKVICFRKIGAKDQIKDLLRKKRFXXXXXXXXX 523
            F  +GVG C+VA+EE + G ++ VA+ +KV+C++K+ + +QIKDLLRKK +         
Sbjct: 335  FGGEGVGRCVVASEEDKGGRLVAVATATKVVCYQKLPSVEQIKDLLRKKNYKGAISLVEE 394

Query: 522  XXXXXEMTKEMLSYVHAQVGFLLLFNLHFEEAVNHFLQSETMQPSEIFPFILPDPNRWSM 343
                 EM+K++LS+VHAQVGFLLLF+LHF+EAV+HFL SETMQPSE+FPFI+ DPNRWS+
Sbjct: 395  LESEGEMSKDLLSFVHAQVGFLLLFDLHFKEAVDHFLLSETMQPSEVFPFIMRDPNRWSL 454

Query: 342  QVPRNRYWGLHPPPVPLEDVIDDGLNAIQRAIYLRKAGAETAVDEYFLMNPPNRANLLES 163
             VPRNRYWGLHPPP PLEDVIDDGL  IQRA +LRKAG ET VD    +NP NRA+LLES
Sbjct: 455  LVPRNRYWGLHPPPAPLEDVIDDGLMTIQRASFLRKAGVETIVDNDLFLNPANRADLLES 514

Query: 162  AIENIIRYLRLSRDKALAPPVREGVDTLLMYLYRALNLVEEMELLASSENNCVV 1
            AI+NI RYL   R+K L   VREGVDTLLMYLYRALN VE+ME LASS N CVV
Sbjct: 515  AIKNISRYLEACREKDLTESVREGVDTLLMYLYRALNSVEDMEKLASSINWCVV 568


>ref|XP_003530110.1| PREDICTED: transforming growth factor-beta receptor-associated
            protein 1-like [Glycine max]
          Length = 981

 Score =  419 bits (1078), Expect = e-115
 Identities = 215/354 (60%), Positives = 262/354 (74%), Gaps = 1/354 (0%)
 Frame = -1

Query: 1059 CVDGVKS-MVWINDSIIVGTGNGYMLFSCVNGQXXXXXXXXXXXXXXPYLKCLGKECEAL 883
            CVDGV S MVW+NDSI+VGT NGY L SCV GQ                LK L KE   L
Sbjct: 229  CVDGVVSAMVWLNDSIVVGTVNGYSLISCVTGQNSVIFSLPDVSRPPR-LKLLHKEWRVL 287

Query: 882  LLVDNVGIVVNAVGEPLGGSLIFQRTPSSVGEISTYLVAVNDGRMDLYHKKTGLCVQSVS 703
            LLVDNVG++V+  G+P+GGSL+F+     VGEI +Y+V V+DG+++LYHK+   CVQ + 
Sbjct: 288  LLVDNVGVIVDPHGQPVGGSLVFRHGLDLVGEIDSYVVVVSDGKIELYHKRHCGCVQVLP 347

Query: 702  FAEQGVGPCIVANEESRNGEVIVVASPSKVICFRKIGAKDQIKDLLRKKRFXXXXXXXXX 523
            F  +GVG C+VA+EE R G ++ VA+ +KV+C++K+ + +QIKDLLRKK +         
Sbjct: 348  FGGEGVGRCVVASEEDRGGRLVAVATATKVVCYQKLPSVEQIKDLLRKKNYKGAISLVEE 407

Query: 522  XXXXXEMTKEMLSYVHAQVGFLLLFNLHFEEAVNHFLQSETMQPSEIFPFILPDPNRWSM 343
                 EM+K++LS+VHAQVGFLLLF+LHF+EAV+HFL SETMQPSE+FPFI+ DPNRWS+
Sbjct: 408  LESEGEMSKDLLSFVHAQVGFLLLFDLHFKEAVDHFLLSETMQPSEVFPFIMRDPNRWSL 467

Query: 342  QVPRNRYWGLHPPPVPLEDVIDDGLNAIQRAIYLRKAGAETAVDEYFLMNPPNRANLLES 163
             VPRNRYWGLHPPP PLEDVIDDGL  IQRA +LRKAG ET VD    +NP NRA+LLES
Sbjct: 468  LVPRNRYWGLHPPPAPLEDVIDDGLMTIQRASFLRKAGVETIVDSDLFLNPANRADLLES 527

Query: 162  AIENIIRYLRLSRDKALAPPVREGVDTLLMYLYRALNLVEEMELLASSENNCVV 1
            AI+NI RYL   R+K L   VREGVDTLLMYLYRALN VE+ME LASS N CVV
Sbjct: 528  AIKNISRYLEACREKDLTESVREGVDTLLMYLYRALNSVEDMERLASSINWCVV 581


Top