BLASTX nr result

ID: Coptis21_contig00004526 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00004526
         (2474 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003637756.1| hypothetical protein MTR_101s0024 [Medicago ...   164   8e-38
emb|CBI27158.3| unnamed protein product [Vitis vinifera]              163   2e-37
ref|XP_004157755.1| PREDICTED: uncharacterized protein LOC101223...   150   2e-33
ref|NP_181059.1| DCD (Development and Cell Death) domain protein...   149   4e-33
ref|XP_002879533.1| hypothetical protein ARALYDRAFT_482479 [Arab...   149   5e-33

>ref|XP_003637756.1| hypothetical protein MTR_101s0024 [Medicago truncatula]
            gi|355503691|gb|AES84894.1| hypothetical protein
            MTR_101s0024 [Medicago truncatula]
          Length = 558

 Score =  164 bits (416), Expect = 8e-38
 Identities = 85/162 (52%), Positives = 111/162 (68%)
 Frame = -2

Query: 2419 GAIFMASRSTKRECLKRNLFGLPPSQHNFVRKVKSGMVLFLFEYEERKLFGVFQASSDGD 2240
            GAIFM++RST +EC +R+LFGLP S  +FV+ VK+GM+LFLFE+EERKL GVF+A +DG 
Sbjct: 123  GAIFMSNRSTLKECFERSLFGLPGSFSDFVKNVKAGMILFLFEFEERKLHGVFEAITDGG 182

Query: 2239 MNIVPHAFLSSGKQFPSQVRFKTIWYCEPLSERDFCGAIRDNYYTANKFNIGLTRYQVXX 2060
            MNI PHA++SSG+QFP+QV+F  I  C+PL E +FC AIRDNY+T  KFN GL+  Q   
Sbjct: 183  MNISPHAYVSSGQQFPAQVKFTRILRCDPLFENEFCDAIRDNYFTKYKFNFGLSEDQ--- 239

Query: 2059 XXXXXXXXXXXXXXXXXXXXXVSDLLWLFDSRRTKVQKPKSL 1934
                                 V  L+WLF+SR+ +V  P+SL
Sbjct: 240  ---------------------VQSLMWLFNSRKREV--PRSL 258


>emb|CBI27158.3| unnamed protein product [Vitis vinifera]
          Length = 1664

 Score =  163 bits (412), Expect = 2e-37
 Identities = 96/213 (45%), Positives = 127/213 (59%), Gaps = 2/213 (0%)
 Frame = -2

Query: 2419 GAIFMASRSTKRECLKRNLFGLPPSQHNFVRKVKSGMVLFLFEYEERKLFGVFQASSDGD 2240
            GAIFM++R T  ECL+RNLFGLP S+  FV+ VK GMVLFLFEYE+R+L GVFQAS+DG 
Sbjct: 14   GAIFMSNRKTMEECLRRNLFGLPFSKAGFVKHVKVGMVLFLFEYEKRELHGVFQASTDGA 73

Query: 2239 MNIVPHAFLSSGKQFPSQVRFKTIWYCEPLSERDFCGAIRDNYYTANKFNIGLTRYQVXX 2060
            ++IVP AF SSGK+F +QVR  TIW C PL+E +F  AIRDNY+ ANKFN GL++ QV  
Sbjct: 74   IDIVPEAFCSSGKRFSAQVRITTIWNCTPLTEHEFSDAIRDNYFAANKFNFGLSKDQVHR 133

Query: 2059 XXXXXXXXXXXXXXXXXXXXXVSDLLWLFDSRRTKVQKPKSLVSRDIVENRFVKNCGRRG 1880
                                    LL LF S++ K  +P+  + R  V      + G+  
Sbjct: 134  ------------------------LLLLFSSKKLKDLQPQRQLRRSNVSKPVRSSLGKVR 169

Query: 1879 ALVDDEHILGDSGKNRLAMDDD--PINLAKYPG 1787
             +   +   G   +N   +++D  P  L +YPG
Sbjct: 170  RV---DAKTGHRKENVHGVNNDLWPAILTEYPG 199



 Score = 58.9 bits (141), Expect = 6e-06
 Identities = 127/543 (23%), Positives = 212/543 (39%), Gaps = 57/543 (10%)
 Frame = -2

Query: 1927 RDIVENRF-VKNCGRRGALVDD--------EHILGDSGKNRLAMDDDPINLAKYPGL-CR 1778
            R + +NRF V N  R    VDD        E+     G+ R   + D    + + G  C+
Sbjct: 450  RVVDDNRFMVSNRVRNQLQVDDDPRMAFSTEYYRNSLGEARRVTNVDRFAKSDWVGNECQ 509

Query: 1777 SNPNVSVLSDKQFLEQGNSI---FGGQRGLSSIECSSMKQRSPNLLFCAPLRDDAVEQVN 1607
             + N+      ++L + N     + G++ +   + SS +    +  FC   +  + E   
Sbjct: 510  MDNNIEPAISTEYLCKPNLNRLDYSGKQ-IKGTDNSSAQPYFESSAFCLREQRTSCEDTI 568

Query: 1606 NLYSTSFRSKTG---FSAVDSSSVGIADKNSPQALASYPKNSADG-LFPFSRSKVVPFLV 1439
               +  +RS T    +S + S  +     +S  ++   P  S+ G  F   ++K  PF  
Sbjct: 569  ATSTDPYRSGTPTIHYSGLPSCGL----YHSSNSVQECPHCSSLGNAFSSPKNKSPPFHA 624

Query: 1438 ETESSSLPPMRSGSLSIPDSFGDYIPLDSINNFECTSPSILFPETLS--SRCKSVDPTKL 1265
            E+   +        L I    G+ +   + N++EC+      P +    S  K+V+ + L
Sbjct: 625  ESRGVTR------CLDITSGLGNCVSSPTPNDYECSCYRTTMPFSGPGYSESKAVEFSDL 678

Query: 1264 QVCRGLTFPEPSLTSFPPSRHLSFGKKDMDPSFSRGEDPSTP-DVCRPERLRHEEPLYTN 1088
            +  RG +F   SL   P    L  G+ D    +S      TP D   PE   ++  L   
Sbjct: 679  EGYRGSSFAG-SLLPVP----LLKGENDGPAPYSFWPIEETPYDYGYPEASHYKNKLLPK 733

Query: 1087 CEPSCTIFPN-------KFHLQVGFDPLDSQSTDSQGELEQD---KPTSPYPGLCSDISD 938
                     N       + H Q     L+++S +       D   +    + G+ S    
Sbjct: 734  GGDGEAYAANVPLSNEVQCHSQGDLCSLEAKSLNFHENNMSDHDFQSRKKFRGMYSAHQK 793

Query: 937  KRPSVFSRLNVKKVASVPDDDE-ISISKH-VDLSVNQIMDTLYTYEKIWGKSTKKSQCRV 764
             R SVFSRL     A   D+D  +  ++H VD SV+++MD L+     W K  +KS    
Sbjct: 794  SRNSVFSRLTFAAEACAEDNDSPVDYNEHNVDTSVDELMDMLHDSSYHWAKKLRKS---- 849

Query: 763  MKNYVDYSSNAEDTHN-VCKDSSLPSEEKQCNL-------------------ETVEEIPI 644
             K  + +  N E+  N   K      E  QC L                    T  +  +
Sbjct: 850  -KPLIGHHDNGENIRNKKLKTIYSEMERDQCTLFPIQKNMDATLGNGESDHERTKGKPAV 908

Query: 643  NFRRRSKIRK----VQXXXXXXXXXXXGLPAAASHKRRKLIRPSFA-SWRTDDKGAVGEN 479
            +F+RRS+  K    ++           GL   A  KRRKL+RP+F+ +  + +K  +GEN
Sbjct: 909  HFKRRSETGKNRDEIKTGGFVESTGSNGL-LGAHQKRRKLVRPNFSKNEPSHEKDVIGEN 967

Query: 478  CGN 470
              N
Sbjct: 968  TPN 970


>ref|XP_004157755.1| PREDICTED: uncharacterized protein LOC101223774 [Cucumis sativus]
          Length = 1315

 Score =  150 bits (379), Expect = 2e-33
 Identities = 71/118 (60%), Positives = 91/118 (77%)
 Frame = -2

Query: 2419 GAIFMASRSTKRECLKRNLFGLPPSQHNFVRKVKSGMVLFLFEYEERKLFGVFQASSDGD 2240
            GAIFM++  T+ EC +R LFGLP    +FV ++KSGM+LFLFEYE R L GVFQA+SDG 
Sbjct: 17   GAIFMSNCVTRAECFRRKLFGLPYWLGDFVLQIKSGMILFLFEYENRVLHGVFQATSDGA 76

Query: 2239 MNIVPHAFLSSGKQFPSQVRFKTIWYCEPLSERDFCGAIRDNYYTANKFNIGLTRYQV 2066
            MNIVPHA+ SSG++FP+QV+F  +W C P+ E  F  AI+DNY++A KFN GL+R QV
Sbjct: 77   MNIVPHAYSSSGQKFPAQVKFSILWSCNPIFEDRFQSAIKDNYFSAKKFNFGLSRMQV 134


>ref|NP_181059.1| DCD (Development and Cell Death) domain protein [Arabidopsis
            thaliana] gi|145330364|ref|NP_001078007.1| DCD
            (Development and Cell Death) domain protein [Arabidopsis
            thaliana] gi|238479462|ref|NP_001154553.1| DCD
            (Development and Cell Death) domain protein [Arabidopsis
            thaliana] gi|3668090|gb|AAC61822.1| hypothetical protein
            [Arabidopsis thaliana] gi|330253976|gb|AEC09070.1| DCD
            (Development and Cell Death) domain protein [Arabidopsis
            thaliana] gi|330253977|gb|AEC09071.1| DCD (Development
            and Cell Death) domain protein [Arabidopsis thaliana]
            gi|330253978|gb|AEC09072.1| DCD (Development and Cell
            Death) domain protein [Arabidopsis thaliana]
          Length = 879

 Score =  149 bits (376), Expect = 4e-33
 Identities = 71/118 (60%), Positives = 90/118 (76%)
 Frame = -2

Query: 2419 GAIFMASRSTKRECLKRNLFGLPPSQHNFVRKVKSGMVLFLFEYEERKLFGVFQASSDGD 2240
            GAIFM++ ST++ECL R LFGLP     FV+ VK+GM+LFLFE+E+R+L GVFQA SDG 
Sbjct: 23   GAIFMSNNSTRKECLSRKLFGLPIGLGGFVKHVKAGMMLFLFEFEKRELHGVFQACSDGA 82

Query: 2239 MNIVPHAFLSSGKQFPSQVRFKTIWYCEPLSERDFCGAIRDNYYTANKFNIGLTRYQV 2066
            +NI P+AF SSGKQFP+QV+F   W C PL E +F  AI +NY+T  KFN GL++ QV
Sbjct: 83   INIEPNAFRSSGKQFPAQVKFTEKWRCRPLCESEFGNAIHENYFTPTKFNFGLSKAQV 140


>ref|XP_002879533.1| hypothetical protein ARALYDRAFT_482479 [Arabidopsis lyrata subsp.
            lyrata] gi|297325372|gb|EFH55792.1| hypothetical protein
            ARALYDRAFT_482479 [Arabidopsis lyrata subsp. lyrata]
          Length = 890

 Score =  149 bits (375), Expect = 5e-33
 Identities = 71/123 (57%), Positives = 93/123 (75%)
 Frame = -2

Query: 2434 ENSFVGAIFMASRSTKRECLKRNLFGLPPSQHNFVRKVKSGMVLFLFEYEERKLFGVFQA 2255
            E+   GAIFM++ ST++ECL R LFGLP     FV++VK+GM+LFLFE+E+R+L GVFQA
Sbjct: 10   EDPEYGAIFMSNNSTRKECLSRGLFGLPIGLAGFVKQVKAGMMLFLFEFEKRELHGVFQA 69

Query: 2254 SSDGDMNIVPHAFLSSGKQFPSQVRFKTIWYCEPLSERDFCGAIRDNYYTANKFNIGLTR 2075
             SDG +NI P+AF SSGKQFP+QV+F   W C PL E +F  AI +NY+T+ KF  GL++
Sbjct: 70   CSDGAINIEPNAFQSSGKQFPAQVKFTEKWRCRPLCESEFGNAIHENYFTSKKFKFGLSK 129

Query: 2074 YQV 2066
             QV
Sbjct: 130  AQV 132


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