BLASTX nr result
ID: Coptis21_contig00004523
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis21_contig00004523
(1723 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI15353.3| unnamed protein product [Vitis vinifera] 124 8e-26
ref|XP_002267092.1| PREDICTED: dof zinc finger protein DOF5.4-li... 124 8e-26
ref|XP_002322044.1| f-box family protein [Populus trichocarpa] g... 124 1e-25
ref|XP_002317948.1| f-box family protein [Populus trichocarpa] g... 123 1e-25
gb|ADL36680.1| DOF domain class transcription factor [Malus x do... 122 2e-25
>emb|CBI15353.3| unnamed protein product [Vitis vinifera]
Length = 255
Score = 124 bits (311), Expect = 8e-26
Identities = 52/53 (98%), Positives = 53/53 (100%)
Frame = +1
Query: 781 NQALKCPRCDSLNTKFCYYNNYNLSQPRHFCKSCRRYWTKGGVLRNVPVGGGC 939
NQALKCPRC+SLNTKFCYYNNYNLSQPRHFCKSCRRYWTKGGVLRNVPVGGGC
Sbjct: 26 NQALKCPRCESLNTKFCYYNNYNLSQPRHFCKSCRRYWTKGGVLRNVPVGGGC 78
Score = 65.1 bits (157), Expect = 6e-08
Identities = 47/135 (34%), Positives = 65/135 (48%), Gaps = 14/135 (10%)
Frame = +1
Query: 1162 TPAAANFEMLENLENQSSGIFAENGSFTSLMNVGNP----FNFSDISTYRYNGNXXXXXX 1329
T AAA E + SS N + T + +P FN SDIS ++Y
Sbjct: 113 TTAAATTATTEAVSAPSS-----NAASTLMTGSNDPAALGFNISDISPFKY--------- 158
Query: 1330 XXXXXXKMASMVEEMKMQELTAGCIDQ----------NRTSNGELTALDWQSNGDQGLFD 1479
+ QE+TAG +DQ NR+++G +LDWQ++GDQG+FD
Sbjct: 159 ---------------QEQEITAGFLDQTVQVELSALQNRSNHGGFPSLDWQTSGDQGIFD 203
Query: 1480 LANNVDQGGYWSQNQ 1524
L NVDQ GYW+Q+Q
Sbjct: 204 LPGNVDQ-GYWTQSQ 217
>ref|XP_002267092.1| PREDICTED: dof zinc finger protein DOF5.4-like [Vitis vinifera]
Length = 291
Score = 124 bits (311), Expect = 8e-26
Identities = 52/53 (98%), Positives = 53/53 (100%)
Frame = +1
Query: 781 NQALKCPRCDSLNTKFCYYNNYNLSQPRHFCKSCRRYWTKGGVLRNVPVGGGC 939
NQALKCPRC+SLNTKFCYYNNYNLSQPRHFCKSCRRYWTKGGVLRNVPVGGGC
Sbjct: 26 NQALKCPRCESLNTKFCYYNNYNLSQPRHFCKSCRRYWTKGGVLRNVPVGGGC 78
Score = 123 bits (308), Expect = 2e-25
Identities = 75/164 (45%), Positives = 98/164 (59%), Gaps = 17/164 (10%)
Frame = +1
Query: 1117 SLINFSDSRLFMNQ-PTPAAANFEMLENLENQSSG-IFAENGSFTSLMNVGNP-----FN 1275
+L+ F +SR F Q P P NFEM L++ S G IF E GSFTSLM N FN
Sbjct: 135 TLVGFRESRFFAPQSPNP---NFEMPTLLDHSSDGNIFPEIGSFTSLMTGSNDPAALGFN 191
Query: 1276 FSDISTYRYNGNXXXXXXXXXXXXKMASMVEEMKMQELTAGCIDQ----------NRTSN 1425
SDIS ++Y KM+ +E+KMQE+TAG +DQ NR+++
Sbjct: 192 ISDISPFKYQEQVDQNQQWQQQQQKMS---DELKMQEITAGFLDQTVQVELSALQNRSNH 248
Query: 1426 GELTALDWQSNGDQGLFDLANNVDQGGYWSQNQWNENDQHLYLP 1557
G +LDWQ++GDQG+FDL NVDQ GYW+Q+QW++ND LYLP
Sbjct: 249 GGFPSLDWQTSGDQGIFDLPGNVDQ-GYWTQSQWSDNDHPLYLP 291
>ref|XP_002322044.1| f-box family protein [Populus trichocarpa]
gi|118488417|gb|ABK96024.1| unknown [Populus
trichocarpa] gi|222869040|gb|EEF06171.1| f-box family
protein [Populus trichocarpa]
Length = 321
Score = 124 bits (310), Expect = 1e-25
Identities = 52/53 (98%), Positives = 53/53 (100%)
Frame = +1
Query: 781 NQALKCPRCDSLNTKFCYYNNYNLSQPRHFCKSCRRYWTKGGVLRNVPVGGGC 939
+QALKCPRCDSLNTKFCYYNNYNLSQPRHFCKSCRRYWTKGGVLRNVPVGGGC
Sbjct: 32 HQALKCPRCDSLNTKFCYYNNYNLSQPRHFCKSCRRYWTKGGVLRNVPVGGGC 84
>ref|XP_002317948.1| f-box family protein [Populus trichocarpa]
gi|222858621|gb|EEE96168.1| f-box family protein
[Populus trichocarpa]
Length = 329
Score = 123 bits (309), Expect = 1e-25
Identities = 52/52 (100%), Positives = 52/52 (100%)
Frame = +1
Query: 784 QALKCPRCDSLNTKFCYYNNYNLSQPRHFCKSCRRYWTKGGVLRNVPVGGGC 939
QALKCPRCDSLNTKFCYYNNYNLSQPRHFCKSCRRYWTKGGVLRNVPVGGGC
Sbjct: 33 QALKCPRCDSLNTKFCYYNNYNLSQPRHFCKSCRRYWTKGGVLRNVPVGGGC 84
Score = 67.0 bits (162), Expect = 1e-08
Identities = 54/162 (33%), Positives = 77/162 (47%), Gaps = 21/162 (12%)
Frame = +1
Query: 1135 DSRLFMNQPTPAAANFEMLENLENQSSGIFAENGSFTSLMNVGNP-FNFSDISTYRYNGN 1311
+S++F + + +LE + GIF+E GSFTSL+ N F FS++ + +
Sbjct: 171 ESKIFPHGNVNPSFEPSLLE--QGSDCGIFSEIGSFTSLITSTNDLFGFSNMMSQHQPPH 228
Query: 1312 XXXXXXXXXXXXKMASMVEEMKMQELTAG--CIDQN--------------RTSNGELTAL 1443
+ + + QE+T G IDQ + +GE AL
Sbjct: 229 QQQGLEHHVQHNQNQQQWQNHQQQEMTGGGGLIDQTVHVELSALPSSRSTKNDDGEFGAL 288
Query: 1444 DWQ-SNGDQG--LFDLANNVDQGGYWSQNQWNENDQ-HLYLP 1557
DWQ +GDQ LFDL N VDQ YWSQ+QWN+ D LY+P
Sbjct: 289 DWQLGSGDQATSLFDLPNAVDQA-YWSQSQWNDQDHPSLYIP 329
>gb|ADL36680.1| DOF domain class transcription factor [Malus x domestica]
Length = 520
Score = 122 bits (307), Expect = 2e-25
Identities = 53/55 (96%), Positives = 54/55 (98%), Gaps = 1/55 (1%)
Frame = +1
Query: 778 PNQ-ALKCPRCDSLNTKFCYYNNYNLSQPRHFCKSCRRYWTKGGVLRNVPVGGGC 939
PNQ ALKCPRCDSLNTKFCYYNNYNLSQPRHFCK+CRRYWTKGGVLRNVPVGGGC
Sbjct: 30 PNQHALKCPRCDSLNTKFCYYNNYNLSQPRHFCKACRRYWTKGGVLRNVPVGGGC 84
Score = 122 bits (307), Expect = 2e-25
Identities = 53/55 (96%), Positives = 54/55 (98%), Gaps = 1/55 (1%)
Frame = +1
Query: 778 PNQ-ALKCPRCDSLNTKFCYYNNYNLSQPRHFCKSCRRYWTKGGVLRNVPVGGGC 939
PNQ ALKCPRCDSLNTKFCYYNNYNLSQPRHFCK+CRRYWTKGGVLRNVPVGGGC
Sbjct: 226 PNQHALKCPRCDSLNTKFCYYNNYNLSQPRHFCKACRRYWTKGGVLRNVPVGGGC 280
Score = 80.1 bits (196), Expect = 2e-12
Identities = 61/171 (35%), Positives = 86/171 (50%), Gaps = 24/171 (14%)
Frame = +1
Query: 1117 SLINFSDSRLFMNQP------TPAAANFEMLENLENQSSGIFAENGSFTSLMNVGN--PF 1272
S I+ +S F++Q P A+ +LE+ + +GIF+E GSFTSL+ N PF
Sbjct: 355 SNIHNPESNFFISQGGANGGFEPGASAAALLEH-STEINGIFSEIGSFTSLITSSNDMPF 413
Query: 1273 NFSDI--STYRYNGNXXXXXXXXXXXXKMASMVEEMKMQELTAGCIDQ------------ 1410
+F +I S + GN + + +KMQE++ G +DQ
Sbjct: 414 SFGNINGSPFNQQGNHDHNQVHQT---QWGQQNQGVKMQEISGGLLDQTAQVDLSVFQNR 470
Query: 1411 NRTSNGELTALDWQ-SNGDQGLFDLANNVDQGGYWSQNQWNENDQ-HLYLP 1557
+ G +LDWQ +GDQGLFDL N VDQ YWS +QW + D LYLP
Sbjct: 471 SHVGGGGFGSLDWQPGSGDQGLFDLPNTVDQ-AYWSHSQWTDQDHPTLYLP 520