BLASTX nr result

ID: Coptis21_contig00004519 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00004519
         (1148 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281846.1| PREDICTED: transcription factor bHLH149 [Vit...   119   1e-24
ref|XP_002279307.1| PREDICTED: transcription factor bHLH147 [Vit...   115   2e-23
ref|XP_002512524.1| transcription factor, putative [Ricinus comm...   112   2e-22
ref|XP_002519248.1| transcription factor, putative [Ricinus comm...   109   1e-21
ref|XP_004170570.1| PREDICTED: transcription factor bHLH147-like...   104   4e-20

>ref|XP_002281846.1| PREDICTED: transcription factor bHLH149 [Vitis vinifera]
           gi|147818278|emb|CAN64723.1| hypothetical protein
           VITISV_026724 [Vitis vinifera]
          Length = 195

 Score =  119 bits (298), Expect = 1e-24
 Identities = 76/165 (46%), Positives = 92/165 (55%), Gaps = 2/165 (1%)
 Frame = +3

Query: 438 RWKTADEQQNYSSKLIEALRQVRRNXXXXXXXXXXXXXGXXXXXXXXXXXXXXXKGRTRW 617
           RW+T  EQQ YS+KL+EA+ +VRR+             G               KGRTRW
Sbjct: 39  RWRTEAEQQIYSAKLVEAITKVRRSSAPAAAVHR----GRAVREAADRVLAAAGKGRTRW 94

Query: 618 SRAIXXXXXXXXXXXXXXXIVTGNCRXXXXXXXXXXXXXNKRQPALQRKARVLGRLVPGC 797
           SRAI                VTGN R             +K++P L+R+ RVLGRLVPGC
Sbjct: 95  SRAIMTSRVGLRLRKRRKVTVTGNNRLRKPAV-------SKQEPPLKRRVRVLGRLVPGC 147

Query: 798 QKVSFPVILEEATDYIAALEMQVRTMTALTQLL--SVASSSRETP 926
           +K+SFP +LEEATDYIAALEMQVR MTAL +LL  + ASSS   P
Sbjct: 148 RKLSFPNLLEEATDYIAALEMQVRAMTALAELLAGTGASSSNLQP 192


>ref|XP_002279307.1| PREDICTED: transcription factor bHLH147 [Vitis vinifera]
          Length = 219

 Score =  115 bits (289), Expect = 2e-23
 Identities = 79/178 (44%), Positives = 93/178 (52%), Gaps = 7/178 (3%)
 Frame = +3

Query: 435 TRWKTADEQQNYSSKLIEALRQVRRNXXXXXXXXXXXXXGXXXXXXXXXXXXXXXKGRTR 614
           T+WK+  +QQ YSSKL++ALRQVR               G               KGRTR
Sbjct: 43  TKWKSQVQQQLYSSKLLQALRQVRLGSSNETPRR-----GRAVREAADRALAVAAKGRTR 97

Query: 615 WSRAIXXXXXXXXXXXXXXX--IVTGNCRXXXXXXXXXXXXXNKRQPALQRKARVLGRLV 788
           WSRAI                  VTG  R              K  PA+QRK RVLGRLV
Sbjct: 98  WSRAILTNRLKLKFMKHKRQRVTVTGQNRSKKPKVSILRLK-GKNLPAVQRKVRVLGRLV 156

Query: 789 PGCQKVSFPVILEEATDYIAALEMQVRTMTALTQLLS-----VASSSRETPVDEHGST 947
           PGC+K+  P ILEEATDYIAALEMQVR MTALT+LLS      +++S  +P D  GS+
Sbjct: 157 PGCRKLPLPDILEEATDYIAALEMQVRAMTALTELLSGAGAGASTTSSNSPADTLGSS 214


>ref|XP_002512524.1| transcription factor, putative [Ricinus communis]
           gi|223548485|gb|EEF49976.1| transcription factor,
           putative [Ricinus communis]
          Length = 207

 Score =  112 bits (280), Expect = 2e-22
 Identities = 74/168 (44%), Positives = 88/168 (52%), Gaps = 2/168 (1%)
 Frame = +3

Query: 435 TRWKTADEQQNYSSKLIEALRQVRR--NXXXXXXXXXXXXXGXXXXXXXXXXXXXXXKGR 608
           TRW+T  EQQ YSSKL++ALR+ RR  +             G               KG 
Sbjct: 46  TRWRTQPEQQIYSSKLLQALRRSRRTASAADDAAAVSPAAKGRQIRDTADKVLAVAAKGT 105

Query: 609 TRWSRAIXXXXXXXXXXXXXXXIVTGNCRXXXXXXXXXXXXXNKRQPALQRKARVLGRLV 788
           TRWSRAI                VTG  R             NKR PA+ +K RVL RLV
Sbjct: 106 TRWSRAILAGKLRLKVKKVKKVKVTGERRREAVRE-------NKRLPAVDKKVRVLSRLV 158

Query: 789 PGCQKVSFPVILEEATDYIAALEMQVRTMTALTQLLSVASSSRETPVD 932
           PGC+K SF  ILEEA+DYIAALEMQV+ MTALT++L  A+    +PVD
Sbjct: 159 PGCRKASFSNILEEASDYIAALEMQVKAMTALTEIL--AAGGGGSPVD 204


>ref|XP_002519248.1| transcription factor, putative [Ricinus communis]
           gi|223541563|gb|EEF43112.1| transcription factor,
           putative [Ricinus communis]
          Length = 224

 Score =  109 bits (273), Expect = 1e-21
 Identities = 75/182 (41%), Positives = 87/182 (47%), Gaps = 10/182 (5%)
 Frame = +3

Query: 438 RWKTADEQQNYSSKLIEALRQVRRNXXXXXXXXXXXXXGXXXXXXXXXXXXXXXKGRTRW 617
           +WKT  +QQ YSSKLI+AL QVR               G               KGRTRW
Sbjct: 47  KWKTEAQQQIYSSKLIQALSQVRLTPPSPSAPRQ----GRAVREAADRALAFAAKGRTRW 102

Query: 618 SRAIXXXXXXXXXXXXXXX----------IVTGNCRXXXXXXXXXXXXXNKRQPALQRKA 767
           SRAI                          VTG+ R              K  P +QRK 
Sbjct: 103 SRAILTSRIKLKFRKQHKRQKVSAPTGSVAVTGSNRSLKKPRVGVFRLKKKSLPTVQRKV 162

Query: 768 RVLGRLVPGCQKVSFPVILEEATDYIAALEMQVRTMTALTQLLSVASSSRETPVDEHGST 947
           RVLGRLVPGC+K   PVILEEATDYIAALEMQVR M+AL +LLS ++S+  +      S 
Sbjct: 163 RVLGRLVPGCRKQPLPVILEEATDYIAALEMQVRAMSALAELLSGSTSTSSSAASSAPSP 222

Query: 948 PS 953
            S
Sbjct: 223 TS 224


>ref|XP_004170570.1| PREDICTED: transcription factor bHLH147-like isoform 1 [Cucumis
           sativus] gi|449527141|ref|XP_004170571.1| PREDICTED:
           transcription factor bHLH147-like isoform 2 [Cucumis
           sativus]
          Length = 206

 Score =  104 bits (260), Expect = 4e-20
 Identities = 70/163 (42%), Positives = 82/163 (50%), Gaps = 4/163 (2%)
 Frame = +3

Query: 438 RWKTADEQQNYSSKLIEALRQVRRNXXXXXXXXXXXXXGXXXXXXXXXXXXXXXKGRTRW 617
           +WK+  +Q+ YSSKL+ AL QVR               G               KGRTRW
Sbjct: 40  KWKSQAQQEIYSSKLVRALNQVRLGPSNEAPPRR----GRAVREAADRVLAVAAKGRTRW 95

Query: 618 SRAIXXXXXXXXXXXXXXX----IVTGNCRXXXXXXXXXXXXXNKRQPALQRKARVLGRL 785
           SRAI                      GN R              K  PA+QRK RVLGRL
Sbjct: 96  SRAILTNRLKVKFRKAPKRQRSTSTAGNNRSKKPRVSVLRLR-GKSLPAVQRKVRVLGRL 154

Query: 786 VPGCQKVSFPVILEEATDYIAALEMQVRTMTALTQLLSVASSS 914
           VPGC+K   PVILEEATDYIAALEMQVR M+AL +LLS ++S+
Sbjct: 155 VPGCRKEPLPVILEEATDYIAALEMQVRAMSALAELLSASTSA 197


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