BLASTX nr result

ID: Coptis21_contig00004510 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00004510
         (718 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003631777.1| PREDICTED: probable calcium-binding protein ...   152   9e-35
gb|AFK48297.1| unknown [Lotus japonicus]                              148   9e-34
ref|XP_003603581.1| Calcium-binding protein CML42 [Medicago trun...   142   5e-32
ref|XP_002330815.1| predicted protein [Populus trichocarpa] gi|2...   140   3e-31
ref|NP_001236178.1| uncharacterized protein LOC100527700 [Glycin...   135   6e-30

>ref|XP_003631777.1| PREDICTED: probable calcium-binding protein CML27-like [Vitis
           vinifera]
          Length = 177

 Score =  152 bits (383), Expect = 9e-35
 Identities = 90/180 (50%), Positives = 111/180 (61%), Gaps = 3/180 (1%)
 Frame = -3

Query: 635 IVSISFRFISDLIRLFKD---RQSSSVCMDPEPTLESNHGAKLDDLAAEALITVFGMDAD 465
           I  + +R I D++         QSSS+ +D  P      G  LDDL   AL  VFGMD++
Sbjct: 3   ITGVWYRVIGDMVVQALGGGGSQSSSMELDHNPG-----GPVLDDLVGGALRAVFGMDSN 57

Query: 464 GRIKKEKARNVIGKLGLIGNNDDENDFEFHSNSXXXXXXXXXXXXXXXXELRHTELLQCA 285
           GRIKKEKAR V+ KLGL+ N + +  F+  S S                E    ELL+ A
Sbjct: 58  GRIKKEKARLVVEKLGLMHNEEGDCSFDLPSGSKGDELQVEEVLSGMKDEAERVELLREA 117

Query: 284 FTVFDEDGDGFIEALEVKRVLECLGLANGCDIEEFEKMVEAVDLNFDGKVDFSEFKLMMG 105
           F VFD+DGDG+IEA+E+KRVLECLGL  G  +EE EKMV+ VDLN DGKVDFSEF+LMMG
Sbjct: 118 FRVFDKDGDGYIEAMELKRVLECLGLDKGWGMEEIEKMVQVVDLNLDGKVDFSEFELMMG 177


>gb|AFK48297.1| unknown [Lotus japonicus]
          Length = 187

 Score =  148 bits (374), Expect = 9e-34
 Identities = 84/188 (44%), Positives = 112/188 (59%), Gaps = 11/188 (5%)
 Frame = -3

Query: 635 IVSISFRFISDLIRLFKDRQSSSVCMDPEPTLESNHGAKLDDLAAEALITVFGMDADGRI 456
           I  +  RFI D  +  K    SS+    +PT ++    KL +    AL+TVFGM+ +GRI
Sbjct: 3   ITEVCSRFIGDFFKTLKSSPPSSISHLDQPTCKAQDMIKLGEKMVRALVTVFGMENNGRI 62

Query: 455 KKEKARNVIGKLGLIGNNDDEN-----DFE------FHSNSXXXXXXXXXXXXXXXXELR 309
           KKE AR V+ KLGL+  N +E+     +FE      FH +                   +
Sbjct: 63  KKENARKVVEKLGLMYGNSEEDKNKVSEFELPCEGGFHDDEVPVEEVLGELEDMS----K 118

Query: 308 HTELLQCAFTVFDEDGDGFIEALEVKRVLECLGLANGCDIEEFEKMVEAVDLNFDGKVDF 129
            +ELL+ AF +FDEDGDG+I+ALE+KRVL+CLGL  G D+   E MV+ VDLNFDGKVDF
Sbjct: 119 RSELLREAFKIFDEDGDGYIDALELKRVLDCLGLDKGWDMNTIESMVKVVDLNFDGKVDF 178

Query: 128 SEFKLMMG 105
           +EF+LMMG
Sbjct: 179 TEFELMMG 186


>ref|XP_003603581.1| Calcium-binding protein CML42 [Medicago truncatula]
           gi|355492629|gb|AES73832.1| Calcium-binding protein
           CML42 [Medicago truncatula]
          Length = 179

 Score =  142 bits (359), Expect = 5e-32
 Identities = 80/174 (45%), Positives = 108/174 (62%), Gaps = 3/174 (1%)
 Frame = -3

Query: 617 RFISDLIRLFKDRQSSSVCMDPEPTLESNHGA---KLDDLAAEALITVFGMDADGRIKKE 447
           +F+ + ++ FK+   +S  M     L+ NH     KLD+    AL+TVFGM+ +GRIKKE
Sbjct: 9   KFVVEFLQTFKNSPPNS--MPHHDHLDQNHQQNMLKLDERMIRALVTVFGMETNGRIKKE 66

Query: 446 KARNVIGKLGLIGNNDDENDFEFHSNSXXXXXXXXXXXXXXXXELRHTELLQCAFTVFDE 267
            AR V+ KLGLI  +D + +  F  +                   R +ELL  AF +FDE
Sbjct: 67  NARQVVEKLGLIYGSDHKENKAFQDDDEEEVVVEEVLGELEDMSKR-SELLLEAFKIFDE 125

Query: 266 DGDGFIEALEVKRVLECLGLANGCDIEEFEKMVEAVDLNFDGKVDFSEFKLMMG 105
           DGDG+I+A+E+KRVL+CLGL  G D+   E+MV+ VDLNFDGKVDF EF+LMMG
Sbjct: 126 DGDGYIDAMELKRVLDCLGLDKGWDMNTIERMVKVVDLNFDGKVDFGEFELMMG 179


>ref|XP_002330815.1| predicted protein [Populus trichocarpa] gi|222872617|gb|EEF09748.1|
           predicted protein [Populus trichocarpa]
          Length = 181

 Score =  140 bits (353), Expect = 3e-31
 Identities = 79/184 (42%), Positives = 107/184 (58%), Gaps = 4/184 (2%)
 Frame = -3

Query: 644 MIDIVSISFRFISDLIRLFKDRQSSSVCMDPEPTLESNHGAKLDDLAAEALITVFGMDAD 465
           MI I  +  R +     L     SSS C+   PT +     + D+L   AL  VFGM+ +
Sbjct: 1   MIGITGVCSRLVQ---ALGVSGPSSSTCLQTTPTCKQEKARQADELMIRALTAVFGMENN 57

Query: 464 GRIKKEKARNVIGKLGLI----GNNDDENDFEFHSNSXXXXXXXXXXXXXXXXELRHTEL 297
           G+IKKEKAR V+ KLGLI    G  +D+  F+                          +L
Sbjct: 58  GKIKKEKARRVVEKLGLIYVEAGGEEDQAIFDLPGGVDDEEVPVEEVLNGLEDGSDRHQL 117

Query: 296 LQCAFTVFDEDGDGFIEALEVKRVLECLGLANGCDIEEFEKMVEAVDLNFDGKVDFSEFK 117
           LQ AF +FDE+G+G+IEA+E+KRVL+CLGL  G D+E+ +KM++A DLNFDG VDF+EF+
Sbjct: 118 LQEAFKIFDENGNGYIEAVELKRVLQCLGLDKGWDMEQIQKMLKAADLNFDGMVDFNEFE 177

Query: 116 LMMG 105
           LMMG
Sbjct: 178 LMMG 181


>ref|NP_001236178.1| uncharacterized protein LOC100527700 [Glycine max]
           gi|255632982|gb|ACU16845.1| unknown [Glycine max]
          Length = 178

 Score =  135 bits (341), Expect = 6e-30
 Identities = 78/174 (44%), Positives = 106/174 (60%), Gaps = 3/174 (1%)
 Frame = -3

Query: 617 RFISDLIRLFKDRQSSSVC-MDPEPTLESNHGAKLDDLAAEALITVFGMDADGRIKKEKA 441
           RF+ D ++  K    SSV  +D +P     +  KL+D    AL++VFGM+ +GRIKKE A
Sbjct: 9   RFLGDFLQALKCSPQSSVSHLDHKP----QNVLKLNDKMVGALVSVFGMETNGRIKKENA 64

Query: 440 RNVIGKLGLI-GNNDDENDFEFHSNSXXXXXXXXXXXXXXXXEL-RHTELLQCAFTVFDE 267
           R V+ KLGL+   +   + FE                     ++ + +ELL  AF +FDE
Sbjct: 65  RQVVEKLGLMYDKSSSSSGFELTKGGLLDDEVPVEEVLGELEDMSKRSELLHEAFKIFDE 124

Query: 266 DGDGFIEALEVKRVLECLGLANGCDIEEFEKMVEAVDLNFDGKVDFSEFKLMMG 105
           DGDG+I+A+E+KRVL+CLGL  G D+   EKMV+  DLNFDGKVDF EF+LMMG
Sbjct: 125 DGDGYIDAMELKRVLDCLGLDKGWDMSAIEKMVKVADLNFDGKVDFGEFELMMG 178


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