BLASTX nr result

ID: Coptis21_contig00004487 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00004487
         (1318 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002892799.1| binding protein [Arabidopsis lyrata subsp. l...   468   e-129
ref|XP_002330666.1| predicted protein [Populus trichocarpa] gi|1...   463   e-128
ref|XP_002275397.1| PREDICTED: FAM203 family protein DDB_G027686...   461   e-127
ref|NP_172882.1| armadillo/beta-catenin-like repeats-containing ...   458   e-126
ref|XP_003551964.1| PREDICTED: protein FAM203A-like [Glycine max]     458   e-126

>ref|XP_002892799.1| binding protein [Arabidopsis lyrata subsp. lyrata]
            gi|297338641|gb|EFH69058.1| binding protein [Arabidopsis
            lyrata subsp. lyrata]
          Length = 339

 Score =  468 bits (1203), Expect = e-129
 Identities = 237/323 (73%), Positives = 282/323 (87%), Gaps = 1/323 (0%)
 Frame = -3

Query: 1283 MATELEELLQFLSSPSPQVKKGAVDIVRDLTGSEDGLQALTYYSETVFPSLSRLLAENKE 1104
            MATELEEL++FLSSPSP VKK AV+IV  LTGSE+GLQ+L+ YSE + PSLSRLL E+KE
Sbjct: 1    MATELEELVEFLSSPSPPVKKAAVEIVSGLTGSEEGLQSLSKYSEILLPSLSRLLNESKE 60

Query: 1103 ISEPAAQALVNLSENSEISRKMIQVGITRNAMETLYKQQDANISRLIVMLLLNLTQLDEG 924
            +SEPAAQALVNLS+NSE++RKMIQ+G+ + AM+ LYK +   I+RL+VMLL+NLTQLD+G
Sbjct: 61   VSEPAAQALVNLSQNSELARKMIQMGLIKVAMDMLYKPESC-ITRLLVMLLVNLTQLDDG 119

Query: 923  VMSLLQTEDEKTQGVHVMKLVRSFC-TSNEKGEDPFEHVGSILVNISRVEEGRKYILDPK 747
            V SLLQ +DEK  G+H+MKLVRSFC +S E  +D FEHVGSILVNIS+ E+GRK +L+PK
Sbjct: 120  VSSLLQIDDEKMHGLHIMKLVRSFCRSSGETTDDQFEHVGSILVNISKTEDGRKLLLEPK 179

Query: 746  RGLLKQIIRQFDSTSLLRKKGVCGTIRNCCFEADKQLQNLLLVSEYLWPALLLPVAGNKV 567
            RGLLKQIIRQFDST+ LRKKGV GTIRNCCFEA  QLQN+LL+SE+LWPALLLPVAG+K 
Sbjct: 180  RGLLKQIIRQFDSTNQLRKKGVAGTIRNCCFEAKNQLQNILLISEFLWPALLLPVAGSKT 239

Query: 566  YSEQDTSKMPPELGTALSIERESVADPDIRVQALEALYLIILQDAGRRALWSVNGPRVLQ 387
            YSEQD +KMPPELG+ALSIERE V DPDIRVQ LEA+YLIIL++AGRRA WSVNGPR+LQ
Sbjct: 240  YSEQDIAKMPPELGSALSIEREPVTDPDIRVQTLEAIYLIILEEAGRRAFWSVNGPRILQ 299

Query: 386  LGYEDEANGKVMEAYERIGSLLV 318
            +GYE E + K M AYE++GSLLV
Sbjct: 300  VGYEYEEDPKAMRAYEQVGSLLV 322


>ref|XP_002330666.1| predicted protein [Populus trichocarpa] gi|118489595|gb|ABK96599.1|
            unknown [Populus trichocarpa x Populus deltoides]
            gi|222872270|gb|EEF09401.1| predicted protein [Populus
            trichocarpa]
          Length = 336

 Score =  463 bits (1192), Expect = e-128
 Identities = 236/325 (72%), Positives = 284/325 (87%), Gaps = 1/325 (0%)
 Frame = -3

Query: 1283 MATELEELLQFLSSPSPQVKKGAVDIVRDLTGSEDGLQALTYYSETVFPSLSRLLAENKE 1104
            MATELEEL+ FLSSPSP VKK AV+IVRDLTGSEDGL +L+ Y+ TV PSLS+LL E KE
Sbjct: 1    MATELEELVGFLSSPSPPVKKAAVEIVRDLTGSEDGLLSLSKYASTVLPSLSQLLKEKKE 60

Query: 1103 ISEPAAQALVNLSENSEISRKMIQVGITRNAMETLYKQQDANISRLIVMLLLNLTQLDEG 924
            +SEPAA+AL+NLS NS ++ KM+++G+ + AM+ LYK  D++I+RL+VMLL+NLTQLD G
Sbjct: 61   VSEPAAEALINLSLNSNLAAKMVEMGMIKTAMDVLYKP-DSSITRLLVMLLVNLTQLDSG 119

Query: 923  VMSLLQTEDEKTQGVHVMKLVRSFC-TSNEKGEDPFEHVGSILVNISRVEEGRKYILDPK 747
            ++SLLQ EDEK QG+ VMKLVRSF  +S+E  +DPF+HVGSILVNIS+ E GRK +LD K
Sbjct: 120  IVSLLQIEDEKMQGLFVMKLVRSFGRSSDETRDDPFDHVGSILVNISKKEAGRKMLLDSK 179

Query: 746  RGLLKQIIRQFDSTSLLRKKGVCGTIRNCCFEADKQLQNLLLVSEYLWPALLLPVAGNKV 567
            RGLLKQI+RQFDSTS LRKKGV GT+RNCCFEA+ QLQN LL+SE+LWPALLLPVAG K+
Sbjct: 180  RGLLKQILRQFDSTSPLRKKGVSGTLRNCCFEAENQLQNFLLISEFLWPALLLPVAGKKI 239

Query: 566  YSEQDTSKMPPELGTALSIERESVADPDIRVQALEALYLIILQDAGRRALWSVNGPRVLQ 387
            YSEQDTSKMP ELG+ALSIERE   DP+IRV+ALE++YLII+Q+AG RALWSVNGPR+LQ
Sbjct: 240  YSEQDTSKMPLELGSALSIEREPWDDPEIRVEALESIYLIIVQEAGLRALWSVNGPRILQ 299

Query: 386  LGYEDEANGKVMEAYERIGSLLVHG 312
            +GYEDE + KVMEAYER+GSLLVHG
Sbjct: 300  VGYEDEEDPKVMEAYERVGSLLVHG 324


>ref|XP_002275397.1| PREDICTED: FAM203 family protein DDB_G0276861 [Vitis vinifera]
            gi|296086382|emb|CBI31971.3| unnamed protein product
            [Vitis vinifera]
          Length = 336

 Score =  461 bits (1185), Expect = e-127
 Identities = 232/326 (71%), Positives = 284/326 (87%), Gaps = 1/326 (0%)
 Frame = -3

Query: 1283 MATELEELLQFLSSPSPQVKKGAVDIVRDLTGSEDGLQALTYYSETVFPSLSRLLAENKE 1104
            M TELEEL+ FLS+PSPQVKK AVDIV+ LTGSEDGLQ+L  +S+ + PSLSR+L+E KE
Sbjct: 1    MPTELEELVGFLSAPSPQVKKAAVDIVQGLTGSEDGLQSLCSHSDVLIPSLSRVLSEKKE 60

Query: 1103 ISEPAAQALVNLSENSEISRKMIQVGITRNAMETLYKQQDANISRLIVMLLLNLTQLDEG 924
            +SEPAA+AL+NLS+  E + KM+ +G+ + AM+ LYKQ  + I+RL+VMLL+NLTQ D+G
Sbjct: 61   VSEPAAEALINLSQKPEQAAKMVAMGMIKTAMDILYKQ-GSGITRLLVMLLVNLTQSDDG 119

Query: 923  VMSLLQTEDEKTQGVHVMKLVRSFCTSN-EKGEDPFEHVGSILVNISRVEEGRKYILDPK 747
            + SLLQT DEK QG+++MKLVRSFCTS+ E  +DPFEHVGSILVNIS+ + GRK +LDPK
Sbjct: 120  IASLLQTGDEKIQGLYLMKLVRSFCTSSTETTDDPFEHVGSILVNISKKDSGRKMLLDPK 179

Query: 746  RGLLKQIIRQFDSTSLLRKKGVCGTIRNCCFEADKQLQNLLLVSEYLWPALLLPVAGNKV 567
            RG+LKQI+RQFDST+ LRKKGV G IRNCCFEA+ QL+NLLL+SE+LWP LLLPVAG+KV
Sbjct: 180  RGMLKQIVRQFDSTNPLRKKGVSGMIRNCCFEAETQLENLLLISEFLWPTLLLPVAGSKV 239

Query: 566  YSEQDTSKMPPELGTALSIERESVADPDIRVQALEALYLIILQDAGRRALWSVNGPRVLQ 387
            YSE DTSKMP ELG+ALSIERE V DP+IRVQALE+LYLI LQ+AGRRALWSVNGPR+LQ
Sbjct: 240  YSEHDTSKMPLELGSALSIEREPVGDPEIRVQALESLYLISLQEAGRRALWSVNGPRILQ 299

Query: 386  LGYEDEANGKVMEAYERIGSLLVHGN 309
            +GYEDE + KVMEA+E++GSLLVHG+
Sbjct: 300  VGYEDEEDPKVMEAFEQVGSLLVHGS 325


>ref|NP_172882.1| armadillo/beta-catenin-like repeats-containing protein [Arabidopsis
            thaliana] gi|7262671|gb|AAF43929.1|AC012188_6 EST
            gb|AI997595 comes from this gene [Arabidopsis thaliana]
            gi|89000955|gb|ABD59067.1| At1g14300 [Arabidopsis
            thaliana] gi|332191019|gb|AEE29140.1|
            armadillo/beta-catenin-like repeats-containing protein
            [Arabidopsis thaliana]
          Length = 339

 Score =  458 bits (1179), Expect = e-126
 Identities = 232/323 (71%), Positives = 278/323 (86%), Gaps = 1/323 (0%)
 Frame = -3

Query: 1283 MATELEELLQFLSSPSPQVKKGAVDIVRDLTGSEDGLQALTYYSETVFPSLSRLLAENKE 1104
            M TELEEL++FLSSPSP VKK AV+IV  LTGSE+GLQ+L+ YSE + PSLS+LL E+KE
Sbjct: 1    MVTELEELVEFLSSPSPPVKKAAVEIVSGLTGSEEGLQSLSKYSEILLPSLSQLLNESKE 60

Query: 1103 ISEPAAQALVNLSENSEISRKMIQVGITRNAMETLYKQQDANISRLIVMLLLNLTQLDEG 924
            +SEPAAQALVNLS+  E+++KMIQ+G+ + AM+ LYK +   I+RL+VMLL+NLTQLD+G
Sbjct: 61   VSEPAAQALVNLSQKCELAKKMIQMGLIKVAMDMLYKPESC-ITRLLVMLLVNLTQLDDG 119

Query: 923  VMSLLQTEDEKTQGVHVMKLVRSFC-TSNEKGEDPFEHVGSILVNISRVEEGRKYILDPK 747
            V SLLQ +DEK  G+H+MKLVRSFC +S E  +D FEHVGSILVNIS+ E+GRK +L+PK
Sbjct: 120  VSSLLQIDDEKMHGLHIMKLVRSFCRSSGETADDQFEHVGSILVNISKTEDGRKLLLEPK 179

Query: 746  RGLLKQIIRQFDSTSLLRKKGVCGTIRNCCFEADKQLQNLLLVSEYLWPALLLPVAGNKV 567
            R LLKQIIRQFDST+ LRKKGV GTIRNCCFEA  QLQN+LL+SE+LWPALLLPVAG+K 
Sbjct: 180  RRLLKQIIRQFDSTNQLRKKGVAGTIRNCCFEAKNQLQNILLISEFLWPALLLPVAGSKT 239

Query: 566  YSEQDTSKMPPELGTALSIERESVADPDIRVQALEALYLIILQDAGRRALWSVNGPRVLQ 387
            YSEQD +KMPPELG+ALSIERE V DPDIRVQ LEA+YLIIL++AGRRA WSVNGPR+LQ
Sbjct: 240  YSEQDVAKMPPELGSALSIEREPVTDPDIRVQTLEAIYLIILEEAGRRAFWSVNGPRILQ 299

Query: 386  LGYEDEANGKVMEAYERIGSLLV 318
            LGYE E + K M AYE++GSLLV
Sbjct: 300  LGYEYEEDPKAMRAYEQVGSLLV 322


>ref|XP_003551964.1| PREDICTED: protein FAM203A-like [Glycine max]
          Length = 336

 Score =  458 bits (1179), Expect = e-126
 Identities = 232/326 (71%), Positives = 279/326 (85%), Gaps = 1/326 (0%)
 Frame = -3

Query: 1283 MATELEELLQFLSSPSPQVKKGAVDIVRDLTGSEDGLQALTYYSETVFPSLSRLLAENKE 1104
            MATE+EEL+ FLSSPSPQ++K AVDIVR LTGS +GLQ+L  YS  + P+LSRLL   KE
Sbjct: 1    MATEMEELVSFLSSPSPQIRKAAVDIVRGLTGSVEGLQSLANYSNALLPALSRLLTLPKE 60

Query: 1103 ISEPAAQALVNLSENSEISRKMIQVGITRNAMETLYKQQDANISRLIVMLLLNLTQLDEG 924
            +SE AA+ALVNLS+NS ++  M+++G+ + AM+ LYK  D  I+RL+VMLL+NLTQL+ G
Sbjct: 61   VSEAAAEALVNLSQNSSLAEVMVRMGLVKTAMDVLYKP-DCGIARLLVMLLVNLTQLEAG 119

Query: 923  VMSLLQTEDEKTQGVHVMKLVRSFC-TSNEKGEDPFEHVGSILVNISRVEEGRKYILDPK 747
              SLLQTEDEK  G++V+KLVRSFC T++E  +D FEHVGSILVNIS+  +GR+ +LDPK
Sbjct: 120  AASLLQTEDEKVLGLYVIKLVRSFCRTTHENNDDAFEHVGSILVNISKQRKGRELLLDPK 179

Query: 746  RGLLKQIIRQFDSTSLLRKKGVCGTIRNCCFEADKQLQNLLLVSEYLWPALLLPVAGNKV 567
            RGLLKQIIRQFDS S LRKKGV GTIRNCCFEA+ QLQNLLLVSE+LWPALLLPVAGNK+
Sbjct: 180  RGLLKQIIRQFDSNSSLRKKGVSGTIRNCCFEAENQLQNLLLVSEFLWPALLLPVAGNKI 239

Query: 566  YSEQDTSKMPPELGTALSIERESVADPDIRVQALEALYLIILQDAGRRALWSVNGPRVLQ 387
            YSEQD SKMP ELGTALSIERE V DP+IR+QALEA+YLIILQ+AGRRA WSVNGPR++Q
Sbjct: 240  YSEQDRSKMPLELGTALSIERELVNDPEIRIQALEAIYLIILQEAGRRAFWSVNGPRIVQ 299

Query: 386  LGYEDEANGKVMEAYERIGSLLVHGN 309
            +GYEDE + KVMEAYE++GSLLVH +
Sbjct: 300  IGYEDEEDPKVMEAYEQLGSLLVHSS 325


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