BLASTX nr result
ID: Coptis21_contig00004487
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00004487 (1318 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002892799.1| binding protein [Arabidopsis lyrata subsp. l... 468 e-129 ref|XP_002330666.1| predicted protein [Populus trichocarpa] gi|1... 463 e-128 ref|XP_002275397.1| PREDICTED: FAM203 family protein DDB_G027686... 461 e-127 ref|NP_172882.1| armadillo/beta-catenin-like repeats-containing ... 458 e-126 ref|XP_003551964.1| PREDICTED: protein FAM203A-like [Glycine max] 458 e-126 >ref|XP_002892799.1| binding protein [Arabidopsis lyrata subsp. lyrata] gi|297338641|gb|EFH69058.1| binding protein [Arabidopsis lyrata subsp. lyrata] Length = 339 Score = 468 bits (1203), Expect = e-129 Identities = 237/323 (73%), Positives = 282/323 (87%), Gaps = 1/323 (0%) Frame = -3 Query: 1283 MATELEELLQFLSSPSPQVKKGAVDIVRDLTGSEDGLQALTYYSETVFPSLSRLLAENKE 1104 MATELEEL++FLSSPSP VKK AV+IV LTGSE+GLQ+L+ YSE + PSLSRLL E+KE Sbjct: 1 MATELEELVEFLSSPSPPVKKAAVEIVSGLTGSEEGLQSLSKYSEILLPSLSRLLNESKE 60 Query: 1103 ISEPAAQALVNLSENSEISRKMIQVGITRNAMETLYKQQDANISRLIVMLLLNLTQLDEG 924 +SEPAAQALVNLS+NSE++RKMIQ+G+ + AM+ LYK + I+RL+VMLL+NLTQLD+G Sbjct: 61 VSEPAAQALVNLSQNSELARKMIQMGLIKVAMDMLYKPESC-ITRLLVMLLVNLTQLDDG 119 Query: 923 VMSLLQTEDEKTQGVHVMKLVRSFC-TSNEKGEDPFEHVGSILVNISRVEEGRKYILDPK 747 V SLLQ +DEK G+H+MKLVRSFC +S E +D FEHVGSILVNIS+ E+GRK +L+PK Sbjct: 120 VSSLLQIDDEKMHGLHIMKLVRSFCRSSGETTDDQFEHVGSILVNISKTEDGRKLLLEPK 179 Query: 746 RGLLKQIIRQFDSTSLLRKKGVCGTIRNCCFEADKQLQNLLLVSEYLWPALLLPVAGNKV 567 RGLLKQIIRQFDST+ LRKKGV GTIRNCCFEA QLQN+LL+SE+LWPALLLPVAG+K Sbjct: 180 RGLLKQIIRQFDSTNQLRKKGVAGTIRNCCFEAKNQLQNILLISEFLWPALLLPVAGSKT 239 Query: 566 YSEQDTSKMPPELGTALSIERESVADPDIRVQALEALYLIILQDAGRRALWSVNGPRVLQ 387 YSEQD +KMPPELG+ALSIERE V DPDIRVQ LEA+YLIIL++AGRRA WSVNGPR+LQ Sbjct: 240 YSEQDIAKMPPELGSALSIEREPVTDPDIRVQTLEAIYLIILEEAGRRAFWSVNGPRILQ 299 Query: 386 LGYEDEANGKVMEAYERIGSLLV 318 +GYE E + K M AYE++GSLLV Sbjct: 300 VGYEYEEDPKAMRAYEQVGSLLV 322 >ref|XP_002330666.1| predicted protein [Populus trichocarpa] gi|118489595|gb|ABK96599.1| unknown [Populus trichocarpa x Populus deltoides] gi|222872270|gb|EEF09401.1| predicted protein [Populus trichocarpa] Length = 336 Score = 463 bits (1192), Expect = e-128 Identities = 236/325 (72%), Positives = 284/325 (87%), Gaps = 1/325 (0%) Frame = -3 Query: 1283 MATELEELLQFLSSPSPQVKKGAVDIVRDLTGSEDGLQALTYYSETVFPSLSRLLAENKE 1104 MATELEEL+ FLSSPSP VKK AV+IVRDLTGSEDGL +L+ Y+ TV PSLS+LL E KE Sbjct: 1 MATELEELVGFLSSPSPPVKKAAVEIVRDLTGSEDGLLSLSKYASTVLPSLSQLLKEKKE 60 Query: 1103 ISEPAAQALVNLSENSEISRKMIQVGITRNAMETLYKQQDANISRLIVMLLLNLTQLDEG 924 +SEPAA+AL+NLS NS ++ KM+++G+ + AM+ LYK D++I+RL+VMLL+NLTQLD G Sbjct: 61 VSEPAAEALINLSLNSNLAAKMVEMGMIKTAMDVLYKP-DSSITRLLVMLLVNLTQLDSG 119 Query: 923 VMSLLQTEDEKTQGVHVMKLVRSFC-TSNEKGEDPFEHVGSILVNISRVEEGRKYILDPK 747 ++SLLQ EDEK QG+ VMKLVRSF +S+E +DPF+HVGSILVNIS+ E GRK +LD K Sbjct: 120 IVSLLQIEDEKMQGLFVMKLVRSFGRSSDETRDDPFDHVGSILVNISKKEAGRKMLLDSK 179 Query: 746 RGLLKQIIRQFDSTSLLRKKGVCGTIRNCCFEADKQLQNLLLVSEYLWPALLLPVAGNKV 567 RGLLKQI+RQFDSTS LRKKGV GT+RNCCFEA+ QLQN LL+SE+LWPALLLPVAG K+ Sbjct: 180 RGLLKQILRQFDSTSPLRKKGVSGTLRNCCFEAENQLQNFLLISEFLWPALLLPVAGKKI 239 Query: 566 YSEQDTSKMPPELGTALSIERESVADPDIRVQALEALYLIILQDAGRRALWSVNGPRVLQ 387 YSEQDTSKMP ELG+ALSIERE DP+IRV+ALE++YLII+Q+AG RALWSVNGPR+LQ Sbjct: 240 YSEQDTSKMPLELGSALSIEREPWDDPEIRVEALESIYLIIVQEAGLRALWSVNGPRILQ 299 Query: 386 LGYEDEANGKVMEAYERIGSLLVHG 312 +GYEDE + KVMEAYER+GSLLVHG Sbjct: 300 VGYEDEEDPKVMEAYERVGSLLVHG 324 >ref|XP_002275397.1| PREDICTED: FAM203 family protein DDB_G0276861 [Vitis vinifera] gi|296086382|emb|CBI31971.3| unnamed protein product [Vitis vinifera] Length = 336 Score = 461 bits (1185), Expect = e-127 Identities = 232/326 (71%), Positives = 284/326 (87%), Gaps = 1/326 (0%) Frame = -3 Query: 1283 MATELEELLQFLSSPSPQVKKGAVDIVRDLTGSEDGLQALTYYSETVFPSLSRLLAENKE 1104 M TELEEL+ FLS+PSPQVKK AVDIV+ LTGSEDGLQ+L +S+ + PSLSR+L+E KE Sbjct: 1 MPTELEELVGFLSAPSPQVKKAAVDIVQGLTGSEDGLQSLCSHSDVLIPSLSRVLSEKKE 60 Query: 1103 ISEPAAQALVNLSENSEISRKMIQVGITRNAMETLYKQQDANISRLIVMLLLNLTQLDEG 924 +SEPAA+AL+NLS+ E + KM+ +G+ + AM+ LYKQ + I+RL+VMLL+NLTQ D+G Sbjct: 61 VSEPAAEALINLSQKPEQAAKMVAMGMIKTAMDILYKQ-GSGITRLLVMLLVNLTQSDDG 119 Query: 923 VMSLLQTEDEKTQGVHVMKLVRSFCTSN-EKGEDPFEHVGSILVNISRVEEGRKYILDPK 747 + SLLQT DEK QG+++MKLVRSFCTS+ E +DPFEHVGSILVNIS+ + GRK +LDPK Sbjct: 120 IASLLQTGDEKIQGLYLMKLVRSFCTSSTETTDDPFEHVGSILVNISKKDSGRKMLLDPK 179 Query: 746 RGLLKQIIRQFDSTSLLRKKGVCGTIRNCCFEADKQLQNLLLVSEYLWPALLLPVAGNKV 567 RG+LKQI+RQFDST+ LRKKGV G IRNCCFEA+ QL+NLLL+SE+LWP LLLPVAG+KV Sbjct: 180 RGMLKQIVRQFDSTNPLRKKGVSGMIRNCCFEAETQLENLLLISEFLWPTLLLPVAGSKV 239 Query: 566 YSEQDTSKMPPELGTALSIERESVADPDIRVQALEALYLIILQDAGRRALWSVNGPRVLQ 387 YSE DTSKMP ELG+ALSIERE V DP+IRVQALE+LYLI LQ+AGRRALWSVNGPR+LQ Sbjct: 240 YSEHDTSKMPLELGSALSIEREPVGDPEIRVQALESLYLISLQEAGRRALWSVNGPRILQ 299 Query: 386 LGYEDEANGKVMEAYERIGSLLVHGN 309 +GYEDE + KVMEA+E++GSLLVHG+ Sbjct: 300 VGYEDEEDPKVMEAFEQVGSLLVHGS 325 >ref|NP_172882.1| armadillo/beta-catenin-like repeats-containing protein [Arabidopsis thaliana] gi|7262671|gb|AAF43929.1|AC012188_6 EST gb|AI997595 comes from this gene [Arabidopsis thaliana] gi|89000955|gb|ABD59067.1| At1g14300 [Arabidopsis thaliana] gi|332191019|gb|AEE29140.1| armadillo/beta-catenin-like repeats-containing protein [Arabidopsis thaliana] Length = 339 Score = 458 bits (1179), Expect = e-126 Identities = 232/323 (71%), Positives = 278/323 (86%), Gaps = 1/323 (0%) Frame = -3 Query: 1283 MATELEELLQFLSSPSPQVKKGAVDIVRDLTGSEDGLQALTYYSETVFPSLSRLLAENKE 1104 M TELEEL++FLSSPSP VKK AV+IV LTGSE+GLQ+L+ YSE + PSLS+LL E+KE Sbjct: 1 MVTELEELVEFLSSPSPPVKKAAVEIVSGLTGSEEGLQSLSKYSEILLPSLSQLLNESKE 60 Query: 1103 ISEPAAQALVNLSENSEISRKMIQVGITRNAMETLYKQQDANISRLIVMLLLNLTQLDEG 924 +SEPAAQALVNLS+ E+++KMIQ+G+ + AM+ LYK + I+RL+VMLL+NLTQLD+G Sbjct: 61 VSEPAAQALVNLSQKCELAKKMIQMGLIKVAMDMLYKPESC-ITRLLVMLLVNLTQLDDG 119 Query: 923 VMSLLQTEDEKTQGVHVMKLVRSFC-TSNEKGEDPFEHVGSILVNISRVEEGRKYILDPK 747 V SLLQ +DEK G+H+MKLVRSFC +S E +D FEHVGSILVNIS+ E+GRK +L+PK Sbjct: 120 VSSLLQIDDEKMHGLHIMKLVRSFCRSSGETADDQFEHVGSILVNISKTEDGRKLLLEPK 179 Query: 746 RGLLKQIIRQFDSTSLLRKKGVCGTIRNCCFEADKQLQNLLLVSEYLWPALLLPVAGNKV 567 R LLKQIIRQFDST+ LRKKGV GTIRNCCFEA QLQN+LL+SE+LWPALLLPVAG+K Sbjct: 180 RRLLKQIIRQFDSTNQLRKKGVAGTIRNCCFEAKNQLQNILLISEFLWPALLLPVAGSKT 239 Query: 566 YSEQDTSKMPPELGTALSIERESVADPDIRVQALEALYLIILQDAGRRALWSVNGPRVLQ 387 YSEQD +KMPPELG+ALSIERE V DPDIRVQ LEA+YLIIL++AGRRA WSVNGPR+LQ Sbjct: 240 YSEQDVAKMPPELGSALSIEREPVTDPDIRVQTLEAIYLIILEEAGRRAFWSVNGPRILQ 299 Query: 386 LGYEDEANGKVMEAYERIGSLLV 318 LGYE E + K M AYE++GSLLV Sbjct: 300 LGYEYEEDPKAMRAYEQVGSLLV 322 >ref|XP_003551964.1| PREDICTED: protein FAM203A-like [Glycine max] Length = 336 Score = 458 bits (1179), Expect = e-126 Identities = 232/326 (71%), Positives = 279/326 (85%), Gaps = 1/326 (0%) Frame = -3 Query: 1283 MATELEELLQFLSSPSPQVKKGAVDIVRDLTGSEDGLQALTYYSETVFPSLSRLLAENKE 1104 MATE+EEL+ FLSSPSPQ++K AVDIVR LTGS +GLQ+L YS + P+LSRLL KE Sbjct: 1 MATEMEELVSFLSSPSPQIRKAAVDIVRGLTGSVEGLQSLANYSNALLPALSRLLTLPKE 60 Query: 1103 ISEPAAQALVNLSENSEISRKMIQVGITRNAMETLYKQQDANISRLIVMLLLNLTQLDEG 924 +SE AA+ALVNLS+NS ++ M+++G+ + AM+ LYK D I+RL+VMLL+NLTQL+ G Sbjct: 61 VSEAAAEALVNLSQNSSLAEVMVRMGLVKTAMDVLYKP-DCGIARLLVMLLVNLTQLEAG 119 Query: 923 VMSLLQTEDEKTQGVHVMKLVRSFC-TSNEKGEDPFEHVGSILVNISRVEEGRKYILDPK 747 SLLQTEDEK G++V+KLVRSFC T++E +D FEHVGSILVNIS+ +GR+ +LDPK Sbjct: 120 AASLLQTEDEKVLGLYVIKLVRSFCRTTHENNDDAFEHVGSILVNISKQRKGRELLLDPK 179 Query: 746 RGLLKQIIRQFDSTSLLRKKGVCGTIRNCCFEADKQLQNLLLVSEYLWPALLLPVAGNKV 567 RGLLKQIIRQFDS S LRKKGV GTIRNCCFEA+ QLQNLLLVSE+LWPALLLPVAGNK+ Sbjct: 180 RGLLKQIIRQFDSNSSLRKKGVSGTIRNCCFEAENQLQNLLLVSEFLWPALLLPVAGNKI 239 Query: 566 YSEQDTSKMPPELGTALSIERESVADPDIRVQALEALYLIILQDAGRRALWSVNGPRVLQ 387 YSEQD SKMP ELGTALSIERE V DP+IR+QALEA+YLIILQ+AGRRA WSVNGPR++Q Sbjct: 240 YSEQDRSKMPLELGTALSIERELVNDPEIRIQALEAIYLIILQEAGRRAFWSVNGPRIVQ 299 Query: 386 LGYEDEANGKVMEAYERIGSLLVHGN 309 +GYEDE + KVMEAYE++GSLLVH + Sbjct: 300 IGYEDEEDPKVMEAYEQLGSLLVHSS 325