BLASTX nr result
ID: Coptis21_contig00004452
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis21_contig00004452
(1162 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002282050.1| PREDICTED: protein RER1B [Vitis vinifera] gi... 327 5e-87
ref|XP_004152693.1| PREDICTED: protein RER1B-like [Cucumis sativ... 323 4e-86
ref|XP_002510410.1| rer1 protein, putative [Ricinus communis] gi... 322 1e-85
ref|XP_002307664.1| predicted protein [Populus trichocarpa] gi|2... 308 2e-81
ref|XP_002300762.1| predicted protein [Populus trichocarpa] gi|2... 307 3e-81
>ref|XP_002282050.1| PREDICTED: protein RER1B [Vitis vinifera]
gi|302142515|emb|CBI19718.3| unnamed protein product
[Vitis vinifera]
Length = 194
Score = 327 bits (837), Expect = 5e-87
Identities = 153/194 (78%), Positives = 170/194 (87%)
Frame = -1
Query: 916 MEGVGDDVASATAPFAKYRSDLSRTFQHYLDKLTPLASERWIGTGVLATFFLLRVYLVQG 737
ME V D AS AP AK+++D SR FQHYLDK TP RW+GT +A ++LRVY VQG
Sbjct: 1 MERVEGDAASTVAPLAKWKNDFSRAFQHYLDKSTPHPVHRWLGTLAVAAIYVLRVYYVQG 60
Query: 736 FYLISYALGIYLLNLLIGFMSPKVDPELEALDGAALPTKGSDEFKPFIRRLPEFKFWYSI 557
FY++SY LGIY+LNLLIGF+SPKVDPELE LDGA+LPTKGSDEFKPFIRRLPEFKFWYSI
Sbjct: 61 FYIVSYGLGIYILNLLIGFLSPKVDPELEVLDGASLPTKGSDEFKPFIRRLPEFKFWYSI 120
Query: 556 TKAFCIAFLMTFFSVFDVPVFWPILLCYWIVLFVLTMKRQILHMIKYKYIPFNIGKQKYT 377
TKAFC+AFLMTFFSVFDVPVFWPILLCYWIVLFVLTMKRQI+HMIKYKY+PF+IGKQ+YT
Sbjct: 121 TKAFCVAFLMTFFSVFDVPVFWPILLCYWIVLFVLTMKRQIMHMIKYKYVPFSIGKQRYT 180
Query: 376 GKKSAASGIGSPRD 335
GKKSAAS G PRD
Sbjct: 181 GKKSAASSRGLPRD 194
>ref|XP_004152693.1| PREDICTED: protein RER1B-like [Cucumis sativus]
gi|449496096|ref|XP_004160038.1| PREDICTED: protein
RER1B-like [Cucumis sativus]
Length = 194
Score = 323 bits (829), Expect = 4e-86
Identities = 150/194 (77%), Positives = 174/194 (89%)
Frame = -1
Query: 916 MEGVGDDVASATAPFAKYRSDLSRTFQHYLDKLTPLASERWIGTGVLATFFLLRVYLVQG 737
MEGVG D ASA AP AK+R+D SR FQ+YLD+ TP +RW+GT ++A ++LRV+ VQG
Sbjct: 1 MEGVGGDTASAVAPLAKWRNDFSRAFQYYLDRSTPHPVQRWLGTLLVAAIYVLRVFYVQG 60
Query: 736 FYLISYALGIYLLNLLIGFMSPKVDPELEALDGAALPTKGSDEFKPFIRRLPEFKFWYSI 557
FY++SY LGIY+LNLLIGF+SPKVDPEL+ LDGA+LPTKGSDEFKPFIRRLPEFKFWY+I
Sbjct: 61 FYVVSYGLGIYILNLLIGFLSPKVDPELDVLDGASLPTKGSDEFKPFIRRLPEFKFWYAI 120
Query: 556 TKAFCIAFLMTFFSVFDVPVFWPILLCYWIVLFVLTMKRQILHMIKYKYIPFNIGKQKYT 377
TKAFCIAFLMTFFS+FDVPVFWPILLCYWIVLFVLTMKRQI+HMIKYKYIPF+IGKQ+YT
Sbjct: 121 TKAFCIAFLMTFFSLFDVPVFWPILLCYWIVLFVLTMKRQIMHMIKYKYIPFSIGKQRYT 180
Query: 376 GKKSAASGIGSPRD 335
GK+S+AS G RD
Sbjct: 181 GKRSSASSSGVSRD 194
>ref|XP_002510410.1| rer1 protein, putative [Ricinus communis]
gi|223551111|gb|EEF52597.1| rer1 protein, putative
[Ricinus communis]
Length = 194
Score = 322 bits (825), Expect = 1e-85
Identities = 147/194 (75%), Positives = 170/194 (87%)
Frame = -1
Query: 916 MEGVGDDVASATAPFAKYRSDLSRTFQHYLDKLTPLASERWIGTGVLATFFLLRVYLVQG 737
MEG G D S APFAK+R++ SRTFQ+YLD+ TP ERW+GT + ++LRVY QG
Sbjct: 1 MEGAGGDTDSIVAPFAKWRNEFSRTFQYYLDRSTPYPMERWLGTLAASAIYMLRVYYAQG 60
Query: 736 FYLISYALGIYLLNLLIGFMSPKVDPELEALDGAALPTKGSDEFKPFIRRLPEFKFWYSI 557
FY++SY LGIY+LNLLIGF+SPKVDPELE LDGA+LPTKGSDEFKPFIRRLPEFKFWYSI
Sbjct: 61 FYIVSYGLGIYILNLLIGFLSPKVDPELEVLDGASLPTKGSDEFKPFIRRLPEFKFWYSI 120
Query: 556 TKAFCIAFLMTFFSVFDVPVFWPILLCYWIVLFVLTMKRQILHMIKYKYIPFNIGKQKYT 377
TKAFC+AFLMTFFSVFDVPVFWPILLCYW+VLFVLTMKRQI+HMIKYKY+PF++GKQ+Y+
Sbjct: 121 TKAFCVAFLMTFFSVFDVPVFWPILLCYWVVLFVLTMKRQIMHMIKYKYVPFSVGKQRYS 180
Query: 376 GKKSAASGIGSPRD 335
GKKSAAS G +D
Sbjct: 181 GKKSAASSSGILKD 194
>ref|XP_002307664.1| predicted protein [Populus trichocarpa] gi|222857113|gb|EEE94660.1|
predicted protein [Populus trichocarpa]
Length = 194
Score = 308 bits (789), Expect = 2e-81
Identities = 145/194 (74%), Positives = 164/194 (84%)
Frame = -1
Query: 916 MEGVGDDVASATAPFAKYRSDLSRTFQHYLDKLTPLASERWIGTGVLATFFLLRVYLVQG 737
MEG G D A+ AP AK+R+D SR FQ YLD+ TP +ERW+GT +A ++LR Y VQG
Sbjct: 1 MEGNGGDAANVVAPLAKWRNDFSRAFQFYLDRSTPHPTERWLGTLAVAAVYVLRAYFVQG 60
Query: 736 FYLISYALGIYLLNLLIGFMSPKVDPELEALDGAALPTKGSDEFKPFIRRLPEFKFWYSI 557
FY+ISY LGIY+LNLLIGF+SPKVDPELE D A+LPTKGSDEFKPFIRRLPEFKFWY+I
Sbjct: 61 FYIISYGLGIYILNLLIGFLSPKVDPELEVSDDASLPTKGSDEFKPFIRRLPEFKFWYAI 120
Query: 556 TKAFCIAFLMTFFSVFDVPVFWPILLCYWIVLFVLTMKRQILHMIKYKYIPFNIGKQKYT 377
TKAFC+AFLMTFFSVFDVPVFWPILLCYWIVLFVLTMKRQI+HMIKYKY+PF+ GKQ+Y
Sbjct: 121 TKAFCVAFLMTFFSVFDVPVFWPILLCYWIVLFVLTMKRQIMHMIKYKYVPFSRGKQRYG 180
Query: 376 GKKSAASGIGSPRD 335
KKS AS G RD
Sbjct: 181 RKKSGASSSGLMRD 194
>ref|XP_002300762.1| predicted protein [Populus trichocarpa] gi|222842488|gb|EEE80035.1|
predicted protein [Populus trichocarpa]
Length = 194
Score = 307 bits (787), Expect = 3e-81
Identities = 140/194 (72%), Positives = 166/194 (85%)
Frame = -1
Query: 916 MEGVGDDVASATAPFAKYRSDLSRTFQHYLDKLTPLASERWIGTGVLATFFLLRVYLVQG 737
MEG G D A+ P AK+R+D SR FQ+YLD+ TP +RW+GT +A ++LRV+ QG
Sbjct: 1 MEGNGGDAANVVGPVAKWRNDFSRAFQYYLDRSTPHPMQRWLGTLAVAAIYVLRVFYAQG 60
Query: 736 FYLISYALGIYLLNLLIGFMSPKVDPELEALDGAALPTKGSDEFKPFIRRLPEFKFWYSI 557
FY++SY LGIY+LNLLIGF+SPKVDPELE LDGA+LPTKGSDEFKPFIRRLPEFKFWY+I
Sbjct: 61 FYIVSYGLGIYILNLLIGFLSPKVDPELEVLDGASLPTKGSDEFKPFIRRLPEFKFWYAI 120
Query: 556 TKAFCIAFLMTFFSVFDVPVFWPILLCYWIVLFVLTMKRQILHMIKYKYIPFNIGKQKYT 377
TKAFC+AFLMTFFS+FDVPVFWPILLCYWIVLFVLTMKRQ++HM+KYKY+PF++GKQ+Y
Sbjct: 121 TKAFCVAFLMTFFSIFDVPVFWPILLCYWIVLFVLTMKRQLMHMMKYKYVPFSLGKQRYG 180
Query: 376 GKKSAASGIGSPRD 335
KKS AS G RD
Sbjct: 181 KKKSDASSSGLMRD 194