BLASTX nr result

ID: Coptis21_contig00004430 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00004430
         (945 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003631369.1| PREDICTED: uncharacterized protein LOC100246...   338   1e-90
ref|NP_196729.1| uncharacterized protein [Arabidopsis thaliana] ...   332   8e-89
ref|XP_002871487.1| hypothetical protein ARALYDRAFT_909134 [Arab...   328   1e-87
gb|ADP88925.1| classical AGP [Gunnera manicata]                       327   3e-87
ref|NP_001237530.1| uncharacterized protein LOC100500660 [Glycin...   326   6e-87

>ref|XP_003631369.1| PREDICTED: uncharacterized protein LOC100246511 [Vitis vinifera]
           gi|296085576|emb|CBI29308.3| unnamed protein product
           [Vitis vinifera]
          Length = 202

 Score =  338 bits (866), Expect = 1e-90
 Identities = 164/198 (82%), Positives = 178/198 (89%), Gaps = 1/198 (0%)
 Frame = -2

Query: 893 MAVNPQLLSPNGMPVAFVSEMFVLARDGVEFQIDKIPGTHGGHIKAKGTIYLSNIRMVFV 714
           MA+NPQL  PNGMPV F++E+ VLARDGVEF++DKIPG HGG+ KAKGTIYLSNIRMVFV
Sbjct: 1   MALNPQLF-PNGMPVPFMNEISVLARDGVEFEVDKIPGAHGGNFKAKGTIYLSNIRMVFV 59

Query: 713 ASKPVGNFAAFDMPLLYVHDEKFNQPIFYCNNISGLVEPVVPEGQHRALYSTHSFKILFK 534
           A+KPVGN  AFDMPLLYVH EKFNQPIF+CNN+SGLVEPVVPE QHRALYSTHSFKILFK
Sbjct: 60  ANKPVGNITAFDMPLLYVHGEKFNQPIFFCNNVSGLVEPVVPENQHRALYSTHSFKILFK 119

Query: 533 EGGCGTFVPLFFNLITSVRQYSQAAPDAVS-HVDPLQASQTPVDEMMRHAYVDPNDPTRI 357
           EGGCGTFVPLFFNLITSVR+Y++ A       VDPLQA+QTPVDEMMRHAYVDPNDPTRI
Sbjct: 120 EGGCGTFVPLFFNLITSVRRYNELAGSGPELQVDPLQAAQTPVDEMMRHAYVDPNDPTRI 179

Query: 356 FLQQPIPESQLRRRTYQP 303
           FLQQP PESQLRRRTY P
Sbjct: 180 FLQQPTPESQLRRRTYHP 197


>ref|NP_196729.1| uncharacterized protein [Arabidopsis thaliana]
           gi|7573382|emb|CAB87686.1| putative protein [Arabidopsis
           thaliana] gi|17065570|gb|AAL32939.1| putative protein
           [Arabidopsis thaliana] gi|17380652|gb|AAL36156.1|
           unknown protein [Arabidopsis thaliana]
           gi|20148563|gb|AAM10172.1| putative protein [Arabidopsis
           thaliana] gi|21436275|gb|AAM51276.1| unknown protein
           [Arabidopsis thaliana] gi|21593584|gb|AAM65551.1|
           unknown [Arabidopsis thaliana]
           gi|332004326|gb|AED91709.1| uncharacterized protein
           [Arabidopsis thaliana]
          Length = 207

 Score =  332 bits (851), Expect = 8e-89
 Identities = 163/207 (78%), Positives = 179/207 (86%), Gaps = 6/207 (2%)
 Frame = -2

Query: 893 MAVNPQLLSPNGMPVAFVSEMFVLARDGVEFQIDKIPGTHGGHIKAKGTIYLSNIRMVFV 714
           MA+NPQLL PNGMPV FV+EMFVL RDGVEF++DKIPG HGGH+KAKG IYLSNIRMVFV
Sbjct: 1   MALNPQLL-PNGMPVPFVNEMFVLVRDGVEFEVDKIPGGHGGHVKAKGVIYLSNIRMVFV 59

Query: 713 ASKPVGNFAAFDMPLLYVHDEKFNQPIFYCNNISGLVEPVVPEGQHRALYSTHSFKILFK 534
           +SKPV NF AFDMPLLY+H EKFNQPIF+CNNI+G VEPVVPE +HRALYSTHSFKILFK
Sbjct: 60  SSKPVDNFVAFDMPLLYIHAEKFNQPIFHCNNIAGQVEPVVPENEHRALYSTHSFKILFK 119

Query: 533 EGGCGTFVPLFFNLITSVRQYSQ------AAPDAVSHVDPLQASQTPVDEMMRHAYVDPN 372
           EGGCGTFVPLF NLI+SVRQY++       A  A  HVDPLQA+QTPVDEMMRHAYVDPN
Sbjct: 120 EGGCGTFVPLFLNLISSVRQYNRQMQQAAEAAAAAPHVDPLQAAQTPVDEMMRHAYVDPN 179

Query: 371 DPTRIFLQQPIPESQLRRRTYQPHSAE 291
           DPTRI+LQQP  ESQLRRR Y   +AE
Sbjct: 180 DPTRIYLQQPSGESQLRRRAYHSGAAE 206


>ref|XP_002871487.1| hypothetical protein ARALYDRAFT_909134 [Arabidopsis lyrata subsp.
           lyrata] gi|297317324|gb|EFH47746.1| hypothetical protein
           ARALYDRAFT_909134 [Arabidopsis lyrata subsp. lyrata]
          Length = 207

 Score =  328 bits (840), Expect = 1e-87
 Identities = 161/207 (77%), Positives = 178/207 (85%), Gaps = 6/207 (2%)
 Frame = -2

Query: 893 MAVNPQLLSPNGMPVAFVSEMFVLARDGVEFQIDKIPGTHGGHIKAKGTIYLSNIRMVFV 714
           MA+NPQLL PNG+P+ FV+EMFVL RDGVEF++DKIPG HGGH+KAKG IYLSNIRMVFV
Sbjct: 1   MALNPQLL-PNGIPIPFVNEMFVLVRDGVEFEVDKIPGGHGGHVKAKGVIYLSNIRMVFV 59

Query: 713 ASKPVGNFAAFDMPLLYVHDEKFNQPIFYCNNISGLVEPVVPEGQHRALYSTHSFKILFK 534
           ASKPV NF AFDMPLLY+H EKFNQPIF+CNNISG VEPVVPE +HRALYSTHSFKILFK
Sbjct: 60  ASKPVDNFVAFDMPLLYIHAEKFNQPIFHCNNISGQVEPVVPENEHRALYSTHSFKILFK 119

Query: 533 EGGCGTFVPLFFNLITSVRQYSQ------AAPDAVSHVDPLQASQTPVDEMMRHAYVDPN 372
           EGGCGTFVPLF NLI+SVRQY++       A  A   VDPLQA+QTPV+EMMRHAYVDPN
Sbjct: 120 EGGCGTFVPLFLNLISSVRQYNRQMQQAAEAAAAAPRVDPLQAAQTPVEEMMRHAYVDPN 179

Query: 371 DPTRIFLQQPIPESQLRRRTYQPHSAE 291
           DPTRI+LQQP  ESQLRRR Y   +AE
Sbjct: 180 DPTRIYLQQPSGESQLRRRAYHSGAAE 206


>gb|ADP88925.1| classical AGP [Gunnera manicata]
          Length = 201

 Score =  327 bits (838), Expect = 3e-87
 Identities = 162/201 (80%), Positives = 176/201 (87%)
 Frame = -2

Query: 893 MAVNPQLLSPNGMPVAFVSEMFVLARDGVEFQIDKIPGTHGGHIKAKGTIYLSNIRMVFV 714
           MA+NPQL  PNGMPV F +E+ VLARDGVEF++DKIPG+ GG +KAKGTIYLSNIRMVFV
Sbjct: 1   MALNPQLF-PNGMPVPFTNEVSVLARDGVEFEVDKIPGSQGGSVKAKGTIYLSNIRMVFV 59

Query: 713 ASKPVGNFAAFDMPLLYVHDEKFNQPIFYCNNISGLVEPVVPEGQHRALYSTHSFKILFK 534
           A+KP GNF AFDMPLLYV  EKFNQPIF CNNISG VEPVVPE QHRALYSTHSFKILFK
Sbjct: 60  ANKPHGNFTAFDMPLLYVRGEKFNQPIFLCNNISGQVEPVVPENQHRALYSTHSFKILFK 119

Query: 533 EGGCGTFVPLFFNLITSVRQYSQAAPDAVSHVDPLQASQTPVDEMMRHAYVDPNDPTRIF 354
           EGGCGTFVPLFFNLITSVRQY+Q +   V +VDPLQA+QTPVDEMMRHAYVDPNDPTRIF
Sbjct: 120 EGGCGTFVPLFFNLITSVRQYNQLSVPVV-NVDPLQAAQTPVDEMMRHAYVDPNDPTRIF 178

Query: 353 LQQPIPESQLRRRTYQPHSAE 291
           LQQP P S+LRRR+YQ    E
Sbjct: 179 LQQPTPGSELRRRSYQSRPVE 199


>ref|NP_001237530.1| uncharacterized protein LOC100500660 [Glycine max]
           gi|255630875|gb|ACU15800.1| unknown [Glycine max]
          Length = 206

 Score =  326 bits (835), Expect = 6e-87
 Identities = 159/202 (78%), Positives = 177/202 (87%), Gaps = 3/202 (1%)
 Frame = -2

Query: 893 MAVNPQLLSPNGMPVAFVSEMFVLARDGVEFQIDKIP--GTHGGHIKAKGTIYLSNIRMV 720
           MA+NPQL  PNGMPV FV+EMFVLARDGVEF++DKIP  G HGG++K KG +YLSNIRMV
Sbjct: 1   MALNPQLF-PNGMPVPFVNEMFVLARDGVEFEVDKIPASGNHGGNLKTKGIVYLSNIRMV 59

Query: 719 FVASKPVGNFAAFDMPLLYVHDEKFNQPIFYCNNISGLVEPVVPEGQHRALYSTHSFKIL 540
           FVA  PVG+F AFDMPLLY+H EKFNQPIF+CNN+SG VEPVVP  QHRALYSTHSFKIL
Sbjct: 60  FVAKSPVGHFTAFDMPLLYIHGEKFNQPIFHCNNLSGHVEPVVPNDQHRALYSTHSFKIL 119

Query: 539 FKEGGCGTFVPLFFNLITSVRQYSQ-AAPDAVSHVDPLQASQTPVDEMMRHAYVDPNDPT 363
           FKEGGCGTF+PLFFNLITSVRQY+Q       ++VDPLQASQTPVDEMMRHAYVDPNDPT
Sbjct: 120 FKEGGCGTFIPLFFNLITSVRQYNQHTNMQTQNYVDPLQASQTPVDEMMRHAYVDPNDPT 179

Query: 362 RIFLQQPIPESQLRRRTYQPHS 297
           +IFLQQP  +SQLRRRTYQP +
Sbjct: 180 KIFLQQPNSDSQLRRRTYQPQA 201


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