BLASTX nr result

ID: Coptis21_contig00004426 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00004426
         (392 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003632202.1| PREDICTED: probable histone H2A.4 isoform 2 ...    94   9e-18
ref|XP_002465460.1| hypothetical protein SORBIDRAFT_01g039250 [S...    94   9e-18
ref|XP_002465459.1| hypothetical protein SORBIDRAFT_01g039240 [S...    94   9e-18
ref|XP_002284305.1| PREDICTED: probable histone H2A.4 isoform 1 ...    94   9e-18
ref|XP_004149043.1| PREDICTED: histone H2A-like [Cucumis sativus...    94   1e-17

>ref|XP_003632202.1| PREDICTED: probable histone H2A.4 isoform 2 [Vitis vinifera]
          Length = 167

 Score = 94.4 bits (233), Expect = 9e-18
 Identities = 46/52 (88%), Positives = 48/52 (92%)
 Frame = -3

Query: 390 LELAGNAARDNKKRTINPRHILLAIRNDEELGKLLSHVTIAHGGVLPNINPV 235
           LELAGNAARDNKK  I PRH+LLA+RNDEELGKLLS VTIAHGGVLPNINPV
Sbjct: 90  LELAGNAARDNKKNRIIPRHVLLAVRNDEELGKLLSGVTIAHGGVLPNINPV 141


>ref|XP_002465460.1| hypothetical protein SORBIDRAFT_01g039250 [Sorghum bicolor]
           gi|241919314|gb|EER92458.1| hypothetical protein
           SORBIDRAFT_01g039250 [Sorghum bicolor]
          Length = 160

 Score = 94.4 bits (233), Expect = 9e-18
 Identities = 47/52 (90%), Positives = 48/52 (92%)
 Frame = -3

Query: 390 LELAGNAARDNKKRTINPRHILLAIRNDEELGKLLSHVTIAHGGVLPNINPV 235
           LELAGNAARDNKK  I PRH+LLAIRNDEELGKLLS VTIAHGGVLPNINPV
Sbjct: 78  LELAGNAARDNKKTRIIPRHVLLAIRNDEELGKLLSGVTIAHGGVLPNINPV 129


>ref|XP_002465459.1| hypothetical protein SORBIDRAFT_01g039240 [Sorghum bicolor]
           gi|241919313|gb|EER92457.1| hypothetical protein
           SORBIDRAFT_01g039240 [Sorghum bicolor]
          Length = 159

 Score = 94.4 bits (233), Expect = 9e-18
 Identities = 47/52 (90%), Positives = 48/52 (92%)
 Frame = -3

Query: 390 LELAGNAARDNKKRTINPRHILLAIRNDEELGKLLSHVTIAHGGVLPNINPV 235
           LELAGNAARDNKK  I PRH+LLAIRNDEELGKLLS VTIAHGGVLPNINPV
Sbjct: 77  LELAGNAARDNKKTRIIPRHVLLAIRNDEELGKLLSGVTIAHGGVLPNINPV 128


>ref|XP_002284305.1| PREDICTED: probable histone H2A.4 isoform 1 [Vitis vinifera]
           gi|147841321|emb|CAN60181.1| hypothetical protein
           VITISV_014244 [Vitis vinifera]
           gi|297746122|emb|CBI16178.3| unnamed protein product
           [Vitis vinifera]
          Length = 149

 Score = 94.4 bits (233), Expect = 9e-18
 Identities = 46/52 (88%), Positives = 48/52 (92%)
 Frame = -3

Query: 390 LELAGNAARDNKKRTINPRHILLAIRNDEELGKLLSHVTIAHGGVLPNINPV 235
           LELAGNAARDNKK  I PRH+LLA+RNDEELGKLLS VTIAHGGVLPNINPV
Sbjct: 72  LELAGNAARDNKKNRIIPRHVLLAVRNDEELGKLLSGVTIAHGGVLPNINPV 123


>ref|XP_004149043.1| PREDICTED: histone H2A-like [Cucumis sativus]
           gi|449530538|ref|XP_004172251.1| PREDICTED: histone
           H2A-like [Cucumis sativus]
          Length = 153

 Score = 93.6 bits (231), Expect = 1e-17
 Identities = 46/52 (88%), Positives = 48/52 (92%)
 Frame = -3

Query: 390 LELAGNAARDNKKRTINPRHILLAIRNDEELGKLLSHVTIAHGGVLPNINPV 235
           LELAGNAARDNKK  I PRH+LLAIRNDEELGKLL+ VTIAHGGVLPNINPV
Sbjct: 72  LELAGNAARDNKKNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNINPV 123


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