BLASTX nr result

ID: Coptis21_contig00004400 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00004400
         (2104 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACU78307.1| viral A-type inclusion protein repeat protein [My...    62   5e-07
gb|ADY39937.1| Major antigen [Ascaris suum]                            62   6e-07
ref|XP_003520644.1| PREDICTED: interactor of constitutive active...    60   2e-06
ref|YP_006838455.1| cAMP-dependent protein kinase regulatory sub...    60   2e-06
gb|AAA85186.1| myosin heavy chain [Dictyostelium discoideum]           59   7e-06

>gb|ACU78307.1| viral A-type inclusion protein repeat protein [Mycoplasma mycoides
            subsp. capri str. GM12] gi|256384568|gb|ACU79137.1| viral
            A-type inclusion protein repeat protein [Mycoplasma
            mycoides subsp. capri str. GM12]
            gi|296455259|gb|ADH21494.1| viral A-type inclusion
            protein repeat protein [synthetic Mycoplasma mycoides
            JCVI-syn1.0]
          Length = 754

 Score = 62.4 bits (150), Expect = 5e-07
 Identities = 59/231 (25%), Positives = 108/231 (46%), Gaps = 7/231 (3%)
 Frame = -3

Query: 1163 KASMDVSTTYALVRKNQDEMDKFTKEKADLTKELLVSKQTIKRLENDHDIMK---SKNES 993
            K S ++      V KN++ +++   E   L K++   ++TIK L++   +++    K +S
Sbjct: 405  KVSQELEKKIKKVEKNKNIIEE---EIEKLRKKITEEQKTIKNLKDQDYVLELEYDKTDS 461

Query: 992  QADEIA-QVRAIERELRKTRHKNKSLEKDLEFAKSEHQEVLKVKNNLIERASHFDGLREA 816
              + +  Q +  E E+RK  HK K ++K+L+  + EH+ ++    +L +R    +     
Sbjct: 462  YKESLKIQTKVFEIEIRKIEHKQKEIKKELKTKEQEHKTLISETKDLSQRTKDLER---- 517

Query: 815  WQVDRSRLTGEIATLNNLKMHYEDKAKALQGEMTPLKFELTEACKKATLTKLELTNSRTV 636
             QV  S+    I  LN  K   E + K L+ ++  ++F LT    K  L K E+ N +  
Sbjct: 518  -QVSLSK--QRIEQLNLEKTKKETELKDLESKIDKMEFNLT----KEGLEK-EIQNKQKE 569

Query: 635  NTEL---RESLNKANAELELLRARFSSSSKSVTAPVPVPEAPGGSAKEITE 492
              +L   +ESL    +E+E L   + S  K +   +       GS +E  E
Sbjct: 570  IEQLKEDKESLLATQSEIEKLLQDYESDKKDIKKQIAANMITQGSLEEEIE 620


>gb|ADY39937.1| Major antigen [Ascaris suum]
          Length = 2200

 Score = 62.0 bits (149), Expect = 6e-07
 Identities = 76/351 (21%), Positives = 145/351 (41%), Gaps = 38/351 (10%)
 Frame = -3

Query: 1187 ERMCRHMMKASMDVSTTYALVRKNQDEMDKFTKEKADLTKELLVSKQTIKRLEND----H 1020
            +R+       +    TT  ++++ + + D+F+K+K +L+++L   K    R+EN+     
Sbjct: 792  DRLSNEFDNTNKTAMTTEQMLKEVKQQRDEFSKQKDELSRQLFDIKH---RMENERAARE 848

Query: 1019 DIMKSKNESQADEI----AQVRAIERELRKTRHKNKSLEKDLEFAKSEHQEVLKVKNNLI 852
            D  K K  S  DEI     Q+   ER+L   RH N  L+  +   KS   ++  V+N+L+
Sbjct: 849  DAEKQKQRSN-DEIEKLKQQLTEYERQLIMIRHHNDELDTQI---KSAQAKMTTVENDLL 904

Query: 851  ERASHFDGLRE-----------------AWQVDRSRLTGEIATLNNLKMHYEDKAKALQG 723
                  + L E                     D +    ++  L       +++ K L+G
Sbjct: 905  TNQKEIEKLNELNNRLQREKQEILNQKHKADADLNASKEQVRKLEQETEKLKNENKVLEG 964

Query: 722  EMTPLKFELTEACKKATLTKLELTNSRTVNTELRESLNKANAEL-----ELLRARFSSSS 558
            +    +  LT+   KA L + EL  ++    EL   L +   +L       +R+R SS  
Sbjct: 965  KEERARDALTQQTNKAHLLQKELEEAKNEIEELGRKLKRMEQDLTDRMRSSIRSRKSSDD 1024

Query: 557  KSVTAPVPV-PEAPGGSAKEITEFYTELVDVVSTEAYKNGISSACRVFDISESEYNKRYD 381
            ++    + V P  P  S    TE     +  ++ + +++ +       D  E    +  D
Sbjct: 1025 ETGGDKISVGPSGPSPSTVRDTEIIEIRIKEIN-DKWRHDLEKLENEKDELERRIRELED 1083

Query: 380  EKLGKAWASGSVSLDDDVLFPDLEVDVDALQVKL-------ENDLAMQKDQ 249
            E   K+ ++    LD   L    + ++D L+ ++       +NDL  +K+Q
Sbjct: 1084 ELAEKSRSADRQDLDIAELKRKHQTEIDRLKAEMAHLYDKHQNDLDEEKEQ 1134


>ref|XP_003520644.1| PREDICTED: interactor of constitutive active ROPs 2,
            chloroplastic-like [Glycine max]
          Length = 621

 Score = 60.5 bits (145), Expect = 2e-06
 Identities = 66/307 (21%), Positives = 130/307 (42%), Gaps = 24/307 (7%)
 Frame = -3

Query: 1232 EKAKHKRVLRATAGLERMCRHMMKASMDVSTTYALVRKNQDEMDKFTKEKADLTKELL-- 1059
            EK +  +V    + + R+   +  A   ++++ +  RK Q E ++  K+  DLTKEL   
Sbjct: 67   EKKRPSKVQELESQIARLQEDLKNAKDQLNSSESWKRKAQQEAEEAKKQLVDLTKELQES 126

Query: 1058 ------------VSKQTIKRLENDHD-----IMKSKNESQADEIAQVRAIERELRKTRHK 930
                        V  Q ++++  D D      +++  + QA + A + +   E++K + +
Sbjct: 127  HQQLLDFSASEEVRLQELRKISQDRDREWQSELEAVQKQQAMDSAALASAMNEIQKLKIQ 186

Query: 929  NK----SLEKDLEFAKSEHQEVLKVKNNLIERASHFDGLREAWQVDRSRLTGEIATLNNL 762
             +    S    +  ++S H E+ ++K  L +  S  + L+      +   +  +  +  +
Sbjct: 187  LERVCGSEATQINSSESAHAEIQELKMELDKTLSLVEKLKNEVGDCKESESRALEVVGKM 246

Query: 761  KMHYEDKAKALQGEMTPLKFELTEACKKATLTKLELTNSRTVNTELRESLNKANAELELL 582
            +M  E   + ++     L+ +  +A +       EL  SRT    L E ++K  A+L   
Sbjct: 247  QMQLETANQTVE----TLRSDGMKAAEAYKSLAFELEQSRTQAKSLEELVSKLQADL--- 299

Query: 581  RARFSSSSKSVTAPVPVPE-APGGSAKEITEFYTELVDVVSTEAYKNGISSACRVFDISE 405
                S+++KS+  P P  E  P    +EI +   EL+        K  +     V DISE
Sbjct: 300  ---LSNANKSMLGPTPTNENEPSQENEEINQLKAELISA------KAEVGQLKSVLDISE 350

Query: 404  SEYNKRY 384
              Y + Y
Sbjct: 351  VRYQEEY 357


>ref|YP_006838455.1| cAMP-dependent protein kinase regulatory subunit [Cycloclasticus sp.
            P1] gi|407257511|gb|AFT67952.1| cAMP-dependent protein
            kinase regulatory chain [Cycloclasticus sp. P1]
          Length = 1504

 Score = 60.1 bits (144), Expect = 2e-06
 Identities = 93/378 (24%), Positives = 166/378 (43%), Gaps = 42/378 (11%)
 Frame = -3

Query: 1262 GLVESMMLPKEKAKHK-----RVLRATAGLER-MCRHMMKASMDVSTTYALVRKNQDEMD 1101
            G + S+   K++ + K      VL +  G +R +   + KA  +       V   Q EMD
Sbjct: 1114 GQLMSVQAEKDELQQKLFDAEAVLSSATGDQRELLVQLEKARNESVELTRTVELKQTEMD 1173

Query: 1100 KFTKEKADLTKELLVSKQTIKRLENDHDIMKSKNESQADEIA-QVRAIERELRKTRHKNK 924
            +F   K +L +ELL SK+  K L    D  + + E   + +A QV   + + R    + K
Sbjct: 1174 EFVSLKKELEEELLTSKKAHKALSTLADSAEQRCEELNNALALQVSKQQDKERMFEERLK 1233

Query: 923  SLEKDLEFAKSEHQE----VLKVKNNLIERASHFDGLREAW-QVDRSRLTGE-IATLNNL 762
            +LE  L+  +++ Q+    + K + NL  + S  + +R A  ++++ +L+G+ +  ++  
Sbjct: 1234 ALENQLQQTENDLQKERIALQKAETNLSSKVSEKEEMRVALSELEQLKLSGDKVVNVSQQ 1293

Query: 761  KM-HYEDKAKALQGEMTPL----------KFELTEA------CKKATLTKLE-----LTN 648
            KM   E   K+L+ E   L            +LTE        +K TL +L+     L  
Sbjct: 1294 KMAELEQSLKSLKVEKEQLIKAHNDADEKTAQLTEQLLTAQNAEKETLKRLDQLMSSLET 1353

Query: 647  SRTVNTELRESL---NKANAELELLRARFSSSSKSVTAPVPVPEAPGGSAKEITEFYTEL 477
             +     L+E L   N  N EL+    +   ++ S     P  +      K++ E  T L
Sbjct: 1354 DKHEKAALQEKLADINNNNNELKHQLEKMERNASSAVENDPAEKRIKELEKQLDEASTML 1413

Query: 476  VDVVSTEAYKNGISSACRVFDISESEYNKRYDEKLGKAWASGSVSLDDDVLFPDLEVDVD 297
            +D+      K   SS+  V + SE E N           A  ++  + D++    E D+ 
Sbjct: 1414 LDL----EIKLETSSSDVVEESSEEEKN-----------ALKALQSELDLVREQTEKDIQ 1458

Query: 296  ALQVKLEN----DLAMQK 255
            A+Q+K+EN    +LA++K
Sbjct: 1459 AMQLKVENSEKMNLALKK 1476


>gb|AAA85186.1| myosin heavy chain [Dictyostelium discoideum]
          Length = 2245

 Score = 58.5 bits (140), Expect = 7e-06
 Identities = 41/177 (23%), Positives = 87/177 (49%), Gaps = 3/177 (1%)
 Frame = -3

Query: 1115 QDEMDKFTKEKADLTKELLVSKQTIKRL--ENDHDIMKSKNESQ-ADEIAQVRAIERELR 945
            ++ +D   ++ +       + KQ +++L  E    ++K  +E   ++E A+ +  + EL 
Sbjct: 1184 KERLDSLGQQSSQFQSGAALEKQQLEQLVQEQSEQLIKLSSEKLGSEEEAKKQINQLELE 1243

Query: 944  KTRHKNKSLEKDLEFAKSEHQEVLKVKNNLIERASHFDGLREAWQVDRSRLTGEIATLNN 765
             T HK+K L+  L+  +  ++++ K+K  L           E +Q ++ +L  E+  +  
Sbjct: 1244 LTDHKSK-LQIQLQLTEQSNEKIKKLKGKL-----------EEYQDEKKQLQQELERIKQ 1291

Query: 764  LKMHYEDKAKALQGEMTPLKFELTEACKKATLTKLELTNSRTVNTELRESLNKANAE 594
             K   ED+  +L  ++T +KFE T+     +  K ++T  ++   EL +S+ K  AE
Sbjct: 1292 SKQSVEDEKNSLITQLTTVKFESTQVSTNVSHQKEKITTLKSTIEELNKSIGKLQAE 1348


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