BLASTX nr result

ID: Coptis21_contig00004398 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00004398
         (1387 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276889.1| PREDICTED: homeobox-leucine zipper protein A...   464   e-128
emb|CAN62385.1| hypothetical protein VITISV_011126 [Vitis vinifera]   462   e-128
ref|XP_002520111.1| homeobox protein, putative [Ricinus communis...   452   e-124
ref|XP_002311597.1| predicted protein [Populus trichocarpa] gi|2...   444   e-122
ref|XP_002315797.1| predicted protein [Populus trichocarpa] gi|2...   431   e-118

>ref|XP_002276889.1| PREDICTED: homeobox-leucine zipper protein ATHB-13-like [Vitis
            vinifera]
          Length = 285

 Score =  464 bits (1195), Expect = e-128
 Identities = 235/289 (81%), Positives = 254/289 (87%), Gaps = 3/289 (1%)
 Frame = -3

Query: 1256 MTCNEMAFFPSNFMLQTSHHEDQDHRHPPTSLKPILPSCTPQDFHGVASFLGKRSMSFSG 1077
            MTCN MAFFP+NFMLQT   +D     PP SL PILPSC PQDFHGVAS LGKRSMSFSG
Sbjct: 1    MTCNGMAFFPANFMLQTPREDDHQ---PPNSLNPILPSCAPQDFHGVASLLGKRSMSFSG 57

Query: 1076 IDVCEEANGEDDLSDDGSQVGEKKRRLNMEQVRTLEKNFELGNKLEPERKMQLARTLGLQ 897
            IDVCEE NGEDDLSDDGSQ GEKKRRLNMEQV+TLEKNFELGNKLEPERKMQLAR LGLQ
Sbjct: 58   IDVCEETNGEDDLSDDGSQAGEKKRRLNMEQVKTLEKNFELGNKLEPERKMQLARALGLQ 117

Query: 896  PRQIAIWFQNRRARWKTKQLEKDYDLLKRQFDAIKADNDALQAQNKKLHAEILALKNREP 717
            PRQIAIWFQNRRARWKTKQLEKDYDLLKRQF+A+KA+NDALQAQN+KLHAE+LALK+REP
Sbjct: 118  PRQIAIWFQNRRARWKTKQLEKDYDLLKRQFEAVKAENDALQAQNQKLHAEMLALKSREP 177

Query: 716  TECINLN-KETEGSCSNRSENSSDINLDISRTPAIDSPLSSNP-SRPLFPSSIRSTSMVQ 543
            TE INLN KETEGSCSNRSENSSDI LDISRTPAIDSPLS++P SRPLFPSSIR   +VQ
Sbjct: 178  TESINLNIKETEGSCSNRSENSSDIKLDISRTPAIDSPLSTHPTSRPLFPSSIRPAGVVQ 237

Query: 542  LLQN-TTKSDLQFQKIDHNNVQEESFCNMFCSIDDQPGFWPWPEQSQFH 399
            L QN +++ DLQ QK+D   V+EESFCNMFC +DDQ GFWPW EQ  F+
Sbjct: 238  LFQNSSSRPDLQCQKMD-QPVKEESFCNMFCGMDDQSGFWPWLEQQHFN 285


>emb|CAN62385.1| hypothetical protein VITISV_011126 [Vitis vinifera]
          Length = 285

 Score =  462 bits (1189), Expect = e-128
 Identities = 234/289 (80%), Positives = 253/289 (87%), Gaps = 3/289 (1%)
 Frame = -3

Query: 1256 MTCNEMAFFPSNFMLQTSHHEDQDHRHPPTSLKPILPSCTPQDFHGVASFLGKRSMSFSG 1077
            MTCN MAFFP+NFMLQT   +D     PP SL PILPSC PQDFHGVAS LGKRSMSFSG
Sbjct: 1    MTCNGMAFFPANFMLQTPREDDHQ---PPNSLNPILPSCAPQDFHGVASLLGKRSMSFSG 57

Query: 1076 IDVCEEANGEDDLSDDGSQVGEKKRRLNMEQVRTLEKNFELGNKLEPERKMQLARTLGLQ 897
            IDVCEE NGEDDLSDDGSQ GEKKRRLNMEQV+TLEKNFELGNKLEPERKM LAR LGLQ
Sbjct: 58   IDVCEETNGEDDLSDDGSQAGEKKRRLNMEQVKTLEKNFELGNKLEPERKMXLARALGLQ 117

Query: 896  PRQIAIWFQNRRARWKTKQLEKDYDLLKRQFDAIKADNDALQAQNKKLHAEILALKNREP 717
            PRQIAIWFQNRRARWKTKQLEKDYDLLKRQF+A+KA+NDALQAQN+KLHAE+LALK+REP
Sbjct: 118  PRQIAIWFQNRRARWKTKQLEKDYDLLKRQFEAVKAENDALQAQNQKLHAEMLALKSREP 177

Query: 716  TECINLN-KETEGSCSNRSENSSDINLDISRTPAIDSPLSSNP-SRPLFPSSIRSTSMVQ 543
            TE INLN KETEGSCSNRSENSSDI LDISRTPAIDSPLS++P SRPLFPSSIR   +VQ
Sbjct: 178  TESINLNIKETEGSCSNRSENSSDIKLDISRTPAIDSPLSTHPTSRPLFPSSIRPAGVVQ 237

Query: 542  LLQN-TTKSDLQFQKIDHNNVQEESFCNMFCSIDDQPGFWPWPEQSQFH 399
            L QN +++ DLQ QK+D   V+EESFCNMFC +DDQ GFWPW EQ  F+
Sbjct: 238  LFQNSSSRPDLQCQKMD-QPVKEESFCNMFCGMDDQSGFWPWLEQQHFN 285


>ref|XP_002520111.1| homeobox protein, putative [Ricinus communis]
            gi|223540603|gb|EEF42166.1| homeobox protein, putative
            [Ricinus communis]
          Length = 296

 Score =  452 bits (1162), Expect = e-124
 Identities = 236/299 (78%), Positives = 251/299 (83%), Gaps = 13/299 (4%)
 Frame = -3

Query: 1256 MTCNEMAFFPSNFMLQTSHHEDQDHRHPPTSLKPILPSCTPQDFHGVASFLGKRSMSFSG 1077
            MTCN MAFFP+NFMLQT H ED  H  PPTSL PILPSCT  DFHGVASFLGKRSMS SG
Sbjct: 1    MTCNGMAFFPANFMLQTPHEED--HHQPPTSLNPILPSCTTHDFHGVASFLGKRSMSCSG 58

Query: 1076 IDVC--EEANGEDDLSDDGSQVGEKKRRLNMEQVRTLEKNFELGNKLEPERKMQLARTLG 903
            ID    EEANGEDDLSDDGSQ GEKKRRLNMEQV+TLEKNFELGNKLEPERKMQLAR LG
Sbjct: 59   IDASCHEEANGEDDLSDDGSQAGEKKRRLNMEQVKTLEKNFELGNKLEPERKMQLARALG 118

Query: 902  LQPRQIAIWFQNRRARWKTKQLEKDYDLLKRQFDAIKADNDALQAQNKKLHAEILALKNR 723
            LQPRQIAIWFQNRRARWKTKQLEKDYDLLKRQF+AIKADNDALQAQN+KLHAEI+ALK+R
Sbjct: 119  LQPRQIAIWFQNRRARWKTKQLEKDYDLLKRQFEAIKADNDALQAQNQKLHAEIMALKSR 178

Query: 722  EPTECINLNKETEGSCSNRSENSSDINLDISRTPAIDSPLSSNP--SRPLFP--SSIRST 555
            EPTE INLNKETEGSCSNRSENSSDI LDISRTPAIDSPLS++P  SRPLFP  SSIR T
Sbjct: 179  EPTESINLNKETEGSCSNRSENSSDIKLDISRTPAIDSPLSNHPITSRPLFPSSSSIRPT 238

Query: 554  SMVQLLQNTTKS-------DLQFQKIDHNNVQEESFCNMFCSIDDQPGFWPWPEQSQFH 399
             +  L  N++ S       ++Q QKID   V+EES  NMFC IDDQ GFWPW EQ  F+
Sbjct: 239  GVAHLFHNSSSSRPDSHHHNIQCQKID-QMVKEESLSNMFCGIDDQSGFWPWLEQQHFN 296


>ref|XP_002311597.1| predicted protein [Populus trichocarpa] gi|222851417|gb|EEE88964.1|
            predicted protein [Populus trichocarpa]
          Length = 289

 Score =  444 bits (1143), Expect = e-122
 Identities = 230/292 (78%), Positives = 253/292 (86%), Gaps = 6/292 (2%)
 Frame = -3

Query: 1256 MTCNEMAFFPSNFMLQTSHHEDQDHRHPPTSLKPILPSCTPQDFHGVASFLGKRS-MSFS 1080
            MTCN MAFFP+NFMLQ+SH  DQD   PPTSL PILPSC P+DFHGVA FLGKRS MSFS
Sbjct: 1    MTCNGMAFFPTNFMLQSSH--DQDDHQPPTSLNPILPSCAPRDFHGVAPFLGKRSSMSFS 58

Query: 1079 GIDVC-EEANGEDDLSDDGSQVGEKKRRLNMEQVRTLEKNFELGNKLEPERKMQLARTLG 903
            GIDVC EE NGED+LSDDGSQ GEKKRRL+MEQV+TLEKNFELGNKLEPERKMQLAR LG
Sbjct: 59   GIDVCHEEGNGEDELSDDGSQAGEKKRRLSMEQVKTLEKNFELGNKLEPERKMQLARALG 118

Query: 902  LQPRQIAIWFQNRRARWKTKQLEKDYDLLKRQFDAIKADNDALQAQNKKLHAEILALKNR 723
            LQPRQIAIWFQNRRARWKTKQLE DYDLLKRQFDA+KA+N+ALQ QN++LHAEILALK+R
Sbjct: 119  LQPRQIAIWFQNRRARWKTKQLEIDYDLLKRQFDAVKAENNALQTQNQRLHAEILALKSR 178

Query: 722  EPTECINLNKETEGSCSNRSENSSDINLDISRTPAIDSPLSSN--PSRPLFP-SSIRSTS 552
            EPTE INLNKETEGSCSNRSENSSDI LDISRTPAIDSPL ++   SRP FP SSIR T 
Sbjct: 179  EPTESINLNKETEGSCSNRSENSSDIKLDISRTPAIDSPLPNHHPTSRPFFPSSSIRPTG 238

Query: 551  MVQLLQ-NTTKSDLQFQKIDHNNVQEESFCNMFCSIDDQPGFWPWPEQSQFH 399
            + QL Q N+++ D Q+QK+DH  V+EES  NM CSI+DQ GFWPW EQ QF+
Sbjct: 239  IAQLNQNNSSRPDFQYQKMDH-IVKEESLTNMLCSIEDQSGFWPWLEQQQFN 289


>ref|XP_002315797.1| predicted protein [Populus trichocarpa] gi|222864837|gb|EEF01968.1|
            predicted protein [Populus trichocarpa]
          Length = 296

 Score =  431 bits (1109), Expect = e-118
 Identities = 232/301 (77%), Positives = 249/301 (82%), Gaps = 15/301 (4%)
 Frame = -3

Query: 1256 MTCNEMAFFPSNFMLQTSHHEDQDHRHPPTSLKPILPSCTPQDFHGVASFLGKRS-MSFS 1080
            MTCN MAFFP+NFMLQ SH  DQD   PPTSL PILPS  PQDFHGVASF+GKRS MSFS
Sbjct: 1    MTCNGMAFFPTNFMLQISH--DQDDHQPPTSLNPILPS--PQDFHGVASFIGKRSSMSFS 56

Query: 1079 GIDVC-EEANGEDDLSDDGSQVGEKKRRLNMEQVRTLEKNFELGNKLEPERKMQLARTLG 903
            GID C EE NGED+LSDDGSQ GEKKRRLNMEQV+TLEKNFELGNKLEPERKMQLAR LG
Sbjct: 57   GIDACHEEGNGEDELSDDGSQAGEKKRRLNMEQVKTLEKNFELGNKLEPERKMQLARALG 116

Query: 902  LQPRQIAIWFQNRRARWKTKQLEKDYDLLKRQFDAIKADNDALQAQNKKLHAEILALKNR 723
            LQPRQIAIWFQNRRARWKTKQLEKDYDLLKRQFDAIKA+NDALQAQN+KLHAEIL LK+R
Sbjct: 117  LQPRQIAIWFQNRRARWKTKQLEKDYDLLKRQFDAIKAENDALQAQNQKLHAEILTLKSR 176

Query: 722  EPTECINLNKETEGSCSNRSENSSDINLDISRTPAIDSPLSSN--PSRPLFPSS------ 567
            EPTE INLNKETEGS SNRSENSSDI LDISRTPAIDSPLS++   SR  FPSS      
Sbjct: 177  EPTEPINLNKETEGSSSNRSENSSDIKLDISRTPAIDSPLSNHHPTSRSFFPSSSSSIRP 236

Query: 566  ----IRSTSMVQLLQ-NTTKSDLQFQKIDHNNVQEESFCNMFCSIDDQPGFWPWPEQSQF 402
                IR T + QL Q N ++ D+Q QKID   V+EE+  NMFCSI+DQ GFWPW EQ  F
Sbjct: 237  AGVAIRPTGVAQLFQTNPSRPDIQCQKID-QLVKEENLGNMFCSIEDQSGFWPWLEQQHF 295

Query: 401  H 399
            +
Sbjct: 296  N 296


Top