BLASTX nr result

ID: Coptis21_contig00004324 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00004324
         (511 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272164.1| PREDICTED: uncharacterized protein LOC100258...    76   3e-12
ref|XP_003543419.1| PREDICTED: uncharacterized protein LOC100780...    62   5e-08
ref|XP_004172133.1| PREDICTED: uncharacterized protein At1g08160...    62   6e-08
ref|XP_002523872.1| conserved hypothetical protein [Ricinus comm...    58   9e-07
ref|XP_004140265.1| PREDICTED: uncharacterized protein At1g08160...    57   1e-06

>ref|XP_002272164.1| PREDICTED: uncharacterized protein LOC100258714 [Vitis vinifera]
          Length = 239

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 38/94 (40%), Positives = 56/94 (59%)
 Frame = +2

Query: 2   APFYQGTLNETKFEAKFASSDVYVILSKKMDRERKSGTVNFNVRLKGWVKLRSSTWRAKV 181
           APFYQGT NET   A FA+   YV +   ++ ER  G+V+F V++   V  +S  W+A+ 
Sbjct: 147 APFYQGTKNETTVTATFAAIGAYVDVLA-INAERTRGSVSFTVKVFARVSFKSGVWKARS 205

Query: 182 HLLSVLCEGVSIGFTSNSGLGTLAGGPKKCDVNL 283
             LS  C  +++G  SN+  G+L GG ++C V L
Sbjct: 206 RFLSAQCNDIALGLPSNASRGSLVGGSRECRVGL 239


>ref|XP_003543419.1| PREDICTED: uncharacterized protein LOC100780672 [Glycine max]
          Length = 271

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 32/94 (34%), Positives = 51/94 (54%), Gaps = 2/94 (2%)
 Frame = +2

Query: 2   APFYQGTLNETKFEAKFASSDVYVI--LSKKMDRERKSGTVNFNVRLKGWVKLRSSTWRA 175
           APF Q T ++T   A   ++  Y+   L   ++ ER + +V F+V++      RS +WR 
Sbjct: 176 APFRQDTRSQTTLNATLTAAGTYLEPKLIDNLNAERNASSVLFDVQVVAATSFRSGSWRF 235

Query: 176 KVHLLSVLCEGVSIGFTSNSGLGTLAGGPKKCDV 277
           +  +L VLC  V +G +S S  G L GG ++C V
Sbjct: 236 RTRVLKVLCRKVPVGVSSKSSSGDLVGGDRECQV 269


>ref|XP_004172133.1| PREDICTED: uncharacterized protein At1g08160-like [Cucumis sativus]
          Length = 248

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 35/97 (36%), Positives = 53/97 (54%), Gaps = 4/97 (4%)
 Frame = +2

Query: 5   PFYQGTLNETKFEAKFASSDVYVILSK--KMDRERKSGTVNFNVRLKGWVKLRSSTWRAK 178
           PF Q    ++   A F++   YV  S   K++ +R+ GT+ FNV +   V  R+  WR +
Sbjct: 152 PFAQEKKTQSVVNASFSALSAYVEASSLNKINDDRRRGTIKFNVGISARVGFRAGWWRTR 211

Query: 179 VHLLSVLCEGVSIGFTS--NSGLGTLAGGPKKCDVNL 283
             LL VLCE +S+ F+S  +SG G L G  + C V +
Sbjct: 212 RRLLRVLCEDLSVSFSSSNSSGSGKLIGESRACRVGI 248


>ref|XP_002523872.1| conserved hypothetical protein [Ricinus communis]
           gi|223536960|gb|EEF38598.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 239

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 35/92 (38%), Positives = 47/92 (51%), Gaps = 1/92 (1%)
 Frame = +2

Query: 5   PFYQGTLNETKFEAKFASSDVYVILSKKMDRERKSGTVNFNVRLKGWVKLRSSTWRAKVH 184
           P YQ T N T  +A F++ D YV      D      T+ FNVRL   V  +   +RA+  
Sbjct: 146 PLYQDTKNLTSLDASFSALDTYVDDRVLKDINAARPTLAFNVRLMADVGFKVGGFRARHR 205

Query: 185 LLSVLCEGVSIGFTS-NSGLGTLAGGPKKCDV 277
           LL V C+ V +  +S  SG G L GG ++C V
Sbjct: 206 LLRVWCDNVPLSLSSATSGSGNLTGGSRECKV 237


>ref|XP_004140265.1| PREDICTED: uncharacterized protein At1g08160-like [Cucumis sativus]
          Length = 243

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 33/88 (37%), Positives = 49/88 (55%), Gaps = 4/88 (4%)
 Frame = +2

Query: 5   PFYQGTLNETKFEAKFASSDVYVILSK--KMDRERKSGTVNFNVRLKGWVKLRSSTWRAK 178
           PF Q    ++   A F++   YV  S   K++ +R+ GT+ FNV +   V  R+  WR +
Sbjct: 152 PFAQEKKTQSVVNASFSALSAYVEASSLNKINDDRRRGTIKFNVGISARVGFRAGWWRTR 211

Query: 179 VHLLSVLCEGVSIGFTS--NSGLGTLAG 256
             LL VLCE +S+ F+S  +SG G L G
Sbjct: 212 RRLLRVLCEDLSVSFSSSNSSGSGKLIG 239


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