BLASTX nr result

ID: Coptis21_contig00004309 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00004309
         (1743 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI29964.3| unnamed protein product [Vitis vinifera]              808   0.0  
ref|XP_002276675.1| PREDICTED: pre-mRNA-splicing factor rse1-lik...   808   0.0  
emb|CAN78747.1| hypothetical protein VITISV_022228 [Vitis vinifera]   805   0.0  
ref|XP_004170344.1| PREDICTED: uncharacterized protein LOC101227...   775   0.0  
ref|XP_004136549.1| PREDICTED: pre-mRNA-splicing factor RSE1-lik...   775   0.0  

>emb|CBI29964.3| unnamed protein product [Vitis vinifera]
          Length = 1363

 Score =  808 bits (2086), Expect = 0.0
 Identities = 404/581 (69%), Positives = 474/581 (81%), Gaps = 1/581 (0%)
 Frame = +2

Query: 2    WNENYRAPDPQTLGKDLLIVLSDSGKLSFLTFCNEMHRFFAVSHIRLSDPGNSRHQLGRM 181
            WNE +   + Q  G+DLL+V+SDSGKLSFL FCNEMHRFF V+H++LS PGN R+QLG+M
Sbjct: 89   WNERFHHQNLQMQGRDLLVVVSDSGKLSFLRFCNEMHRFFPVTHVQLSSPGNLRNQLGQM 148

Query: 182  LAVDSIGCFGAVSAYEGQLALFSVSISAGSNIVDKEIFYSPENKGDTRTARGIQRTNIGG 361
            LA+DS GCF A SAYE +LA+FS+S++  S+I+DK IFY PE +GD+  AR + RT+I G
Sbjct: 149  LAIDSNGCFIATSAYEDRLAMFSISMATDSDIIDKRIFYPPEIEGDSGVARSVHRTSISG 208

Query: 362  TIWSMCFISKDINLLSKDAPDPVLAIILHRKGAVLNELLLLGWDTSEHSTYVLSQYTEPG 541
            TIWSMCFISKD+N  S    +PVLAIIL+R+GAVL EL+LL W   E++  V+SQY E G
Sbjct: 209  TIWSMCFISKDLNQPS-GGYNPVLAIILNRRGAVLTELVLLEWIIIENAVRVISQYAEAG 267

Query: 542  PLALNIVEVPYGYGFALLFRIGDALLMDLRDPRSPCCVYRTNLNTLPSKLEEQNSVEQSS 721
             +A +IVEVP+ YGFA LFRIGDALLMDLRD  +PCCVY+T+LN LP+ +E QN  E+S 
Sbjct: 268  HVAHSIVEVPHSYGFAFLFRIGDALLMDLRDAHNPCCVYKTSLNILPTSVE-QNFAEESC 326

Query: 722  RGLDVDDEGSFNVAACALLELRDPRMEITRGDDPMNIDSDSGK-GSTSRLACSWSWEPGN 898
            R  D D++G FNVAA ALLEL+D    + +GDDPMN+D DSG   STS+  C+ SWEPGN
Sbjct: 327  RVHDGDEDGIFNVAASALLELKD---YVAKGDDPMNVDGDSGMVKSTSKHVCALSWEPGN 383

Query: 899  TSTARMIFGLDTGELYTMEISFDIDGVKVSWSDCLYRGLPCKTILWARGGFIVALVEMGD 1078
               +RMIF +DTGEL+ +EISFD DG KV+ SDCLYRGL CK +LW  GGF+ ALVEMGD
Sbjct: 384  EKNSRMIFCVDTGELFMIEISFDSDGPKVNLSDCLYRGLSCKALLWFAGGFLAALVEMGD 443

Query: 1079 GMVLQFGNERLLYRSAIQNIAPILDMSVVDFRDEKQDQMFACCGMAPEGSLRIIRSGIIV 1258
            GMVL+    RL+YRS IQNIAPILDMSVVD  DE+ DQMFACCG+ PEGSLRIIRSGI V
Sbjct: 444  GMVLKLEQGRLVYRSPIQNIAPILDMSVVDCHDEEHDQMFACCGVTPEGSLRIIRSGISV 503

Query: 1259 EKLLRTAPIYQGITGIWTTRMKIVDCYHSFLVLSFVEETRVLSVGLSFNDVTDAVGFQTD 1438
            EKLLRTAPIYQGITG WT +MK++D YHSFLVLSFVEETRVLSVGLSF DVTD+VGFQ D
Sbjct: 504  EKLLRTAPIYQGITGTWTVKMKVIDSYHSFLVLSFVEETRVLSVGLSFTDVTDSVGFQPD 563

Query: 1439 ACTLACGLVGDGLLVQIHTNAVRLCLPTTAAHPEGIPLSAPICTSWFPHNVSISLGAAGP 1618
              TLACG+V DGLLVQIH N V+LCLPTT AHPEGIPL++PICTSWFP N+SISLGA G 
Sbjct: 564  VSTLACGVVDDGLLVQIHKNGVKLCLPTTVAHPEGIPLASPICTSWFPENISISLGAVGY 623

Query: 1619 NLIVVATSSPCFLYILGVRSLSAYHYELYEMQHVRLQNEVS 1741
            NLIVVATSSPCFL+ILGVRS+SAY YE+YEMQHVRLQNEVS
Sbjct: 624  NLIVVATSSPCFLFILGVRSVSAYQYEIYEMQHVRLQNEVS 664


>ref|XP_002276675.1| PREDICTED: pre-mRNA-splicing factor rse1-like [Vitis vinifera]
          Length = 1387

 Score =  808 bits (2086), Expect = 0.0
 Identities = 404/581 (69%), Positives = 474/581 (81%), Gaps = 1/581 (0%)
 Frame = +2

Query: 2    WNENYRAPDPQTLGKDLLIVLSDSGKLSFLTFCNEMHRFFAVSHIRLSDPGNSRHQLGRM 181
            WNE +   + Q  G+DLL+V+SDSGKLSFL FCNEMHRFF V+H++LS PGN R+QLG+M
Sbjct: 89   WNERFHHQNLQMQGRDLLVVVSDSGKLSFLRFCNEMHRFFPVTHVQLSSPGNLRNQLGQM 148

Query: 182  LAVDSIGCFGAVSAYEGQLALFSVSISAGSNIVDKEIFYSPENKGDTRTARGIQRTNIGG 361
            LA+DS GCF A SAYE +LA+FS+S++  S+I+DK IFY PE +GD+  AR + RT+I G
Sbjct: 149  LAIDSNGCFIATSAYEDRLAMFSISMATDSDIIDKRIFYPPEIEGDSGVARSVHRTSISG 208

Query: 362  TIWSMCFISKDINLLSKDAPDPVLAIILHRKGAVLNELLLLGWDTSEHSTYVLSQYTEPG 541
            TIWSMCFISKD+N  S    +PVLAIIL+R+GAVL EL+LL W   E++  V+SQY E G
Sbjct: 209  TIWSMCFISKDLNQPS-GGYNPVLAIILNRRGAVLTELVLLEWIIIENAVRVISQYAEAG 267

Query: 542  PLALNIVEVPYGYGFALLFRIGDALLMDLRDPRSPCCVYRTNLNTLPSKLEEQNSVEQSS 721
             +A +IVEVP+ YGFA LFRIGDALLMDLRD  +PCCVY+T+LN LP+ +E QN  E+S 
Sbjct: 268  HVAHSIVEVPHSYGFAFLFRIGDALLMDLRDAHNPCCVYKTSLNILPTSVE-QNFAEESC 326

Query: 722  RGLDVDDEGSFNVAACALLELRDPRMEITRGDDPMNIDSDSGK-GSTSRLACSWSWEPGN 898
            R  D D++G FNVAA ALLEL+D    + +GDDPMN+D DSG   STS+  C+ SWEPGN
Sbjct: 327  RVHDGDEDGIFNVAASALLELKD---YVAKGDDPMNVDGDSGMVKSTSKHVCALSWEPGN 383

Query: 899  TSTARMIFGLDTGELYTMEISFDIDGVKVSWSDCLYRGLPCKTILWARGGFIVALVEMGD 1078
               +RMIF +DTGEL+ +EISFD DG KV+ SDCLYRGL CK +LW  GGF+ ALVEMGD
Sbjct: 384  EKNSRMIFCVDTGELFMIEISFDSDGPKVNLSDCLYRGLSCKALLWFAGGFLAALVEMGD 443

Query: 1079 GMVLQFGNERLLYRSAIQNIAPILDMSVVDFRDEKQDQMFACCGMAPEGSLRIIRSGIIV 1258
            GMVL+    RL+YRS IQNIAPILDMSVVD  DE+ DQMFACCG+ PEGSLRIIRSGI V
Sbjct: 444  GMVLKLEQGRLVYRSPIQNIAPILDMSVVDCHDEEHDQMFACCGVTPEGSLRIIRSGISV 503

Query: 1259 EKLLRTAPIYQGITGIWTTRMKIVDCYHSFLVLSFVEETRVLSVGLSFNDVTDAVGFQTD 1438
            EKLLRTAPIYQGITG WT +MK++D YHSFLVLSFVEETRVLSVGLSF DVTD+VGFQ D
Sbjct: 504  EKLLRTAPIYQGITGTWTVKMKVIDSYHSFLVLSFVEETRVLSVGLSFTDVTDSVGFQPD 563

Query: 1439 ACTLACGLVGDGLLVQIHTNAVRLCLPTTAAHPEGIPLSAPICTSWFPHNVSISLGAAGP 1618
              TLACG+V DGLLVQIH N V+LCLPTT AHPEGIPL++PICTSWFP N+SISLGA G 
Sbjct: 564  VSTLACGVVDDGLLVQIHKNGVKLCLPTTVAHPEGIPLASPICTSWFPENISISLGAVGY 623

Query: 1619 NLIVVATSSPCFLYILGVRSLSAYHYELYEMQHVRLQNEVS 1741
            NLIVVATSSPCFL+ILGVRS+SAY YE+YEMQHVRLQNEVS
Sbjct: 624  NLIVVATSSPCFLFILGVRSVSAYQYEIYEMQHVRLQNEVS 664


>emb|CAN78747.1| hypothetical protein VITISV_022228 [Vitis vinifera]
          Length = 1298

 Score =  805 bits (2080), Expect = 0.0
 Identities = 403/581 (69%), Positives = 472/581 (81%), Gaps = 1/581 (0%)
 Frame = +2

Query: 2    WNENYRAPDPQTLGKDLLIVLSDSGKLSFLTFCNEMHRFFAVSHIRLSDPGNSRHQLGRM 181
            WNE +   + Q  G+DLL+V+SDSGKLSFL FCNEMHRFF V+H++LS PGN R+QLG+M
Sbjct: 130  WNERFHHQNLQMQGRDLLVVVSDSGKLSFLRFCNEMHRFFPVTHVQLSSPGNLRNQLGQM 189

Query: 182  LAVDSIGCFGAVSAYEGQLALFSVSISAGSNIVDKEIFYSPENKGDTRTARGIQRTNIGG 361
            LA+DS GCF A SAYE +LA+FS+S++  S+I+DK IFY PE +GD+  AR + RT+I G
Sbjct: 190  LAIDSNGCFIATSAYEDRLAMFSISMATDSDIIDKRIFYPPEIEGDSGVARSVHRTSISG 249

Query: 362  TIWSMCFISKDINLLSKDAPDPVLAIILHRKGAVLNELLLLGWDTSEHSTYVLSQYTEPG 541
            TIWSMCFISKD+N  S    +PVLAIIL+R+GAVL EL+LL W   E++  V+SQY E G
Sbjct: 250  TIWSMCFISKDLNQPS-GGYNPVLAIILNRRGAVLTELVLLEWIIIENAVRVISQYAEAG 308

Query: 542  PLALNIVEVPYGYGFALLFRIGDALLMDLRDPRSPCCVYRTNLNTLPSKLEEQNSVEQSS 721
              A +IVEVP+ YGFA LFRIGDALLMDLRD  +PCCVY+T+LN LP+ +E QN  E+S 
Sbjct: 309  HXAHSIVEVPHSYGFAFLFRIGDALLMDLRDAHNPCCVYKTSLNILPTSVE-QNFAEESC 367

Query: 722  RGLDVDDEGSFNVAACALLELRDPRMEITRGDDPMNIDSDSGK-GSTSRLACSWSWEPGN 898
            R  D D++G FNVAA ALLEL+D    + +GDDPMN+D DSG   STS+  C+ SWEPGN
Sbjct: 368  RVHDGDEDGIFNVAASALLELKD---YVAKGDDPMNVDGDSGMVKSTSKHVCAXSWEPGN 424

Query: 899  TSTARMIFGLDTGELYTMEISFDIDGVKVSWSDCLYRGLPCKTILWARGGFIVALVEMGD 1078
               +RMIF +DTGEL+ +E SFD DG KV+ SDCLYRGL CK +LW  GGF+ ALVEMGD
Sbjct: 425  EKNSRMIFCVDTGELFMIEXSFDSDGPKVNLSDCLYRGLSCKALLWFAGGFLAALVEMGD 484

Query: 1079 GMVLQFGNERLLYRSAIQNIAPILDMSVVDFRDEKQDQMFACCGMAPEGSLRIIRSGIIV 1258
            GMVL+    RL+YRS IQNIAPILDMSVVD  DE+ DQMFACCG+ PEGSLRIIRSGI V
Sbjct: 485  GMVLKLEQGRLVYRSPIQNIAPILDMSVVDCHDEEHDQMFACCGVTPEGSLRIIRSGISV 544

Query: 1259 EKLLRTAPIYQGITGIWTTRMKIVDCYHSFLVLSFVEETRVLSVGLSFNDVTDAVGFQTD 1438
            EKLLRTAPIYQGITG WT +MK++D YHSFLVLSFVEETRVLSVGLSF DVTD+VGFQ D
Sbjct: 545  EKLLRTAPIYQGITGTWTVKMKVIDSYHSFLVLSFVEETRVLSVGLSFTDVTDSVGFQPD 604

Query: 1439 ACTLACGLVGDGLLVQIHTNAVRLCLPTTAAHPEGIPLSAPICTSWFPHNVSISLGAAGP 1618
              TLACG+V DGLLVQIH N V+LCLPTT AHPEGIPL++PICTSWFP N+SISLGA G 
Sbjct: 605  VSTLACGVVDDGLLVQIHKNGVKLCLPTTVAHPEGIPLASPICTSWFPENISISLGAVGY 664

Query: 1619 NLIVVATSSPCFLYILGVRSLSAYHYELYEMQHVRLQNEVS 1741
            NLIVVATSSPCFL+ILGVRS+SAY YE+YEMQHVRLQNEVS
Sbjct: 665  NLIVVATSSPCFLFILGVRSVSAYQYEIYEMQHVRLQNEVS 705


>ref|XP_004170344.1| PREDICTED: uncharacterized protein LOC101227016, partial [Cucumis
            sativus]
          Length = 997

 Score =  775 bits (2002), Expect = 0.0
 Identities = 388/581 (66%), Positives = 464/581 (79%), Gaps = 1/581 (0%)
 Frame = +2

Query: 2    WNENYRAPDPQTLGKDLLIVLSDSGKLSFLTFCNEMHRFFAVSHIRLSDPGNSRHQLGRM 181
            WNE +R    Q LGKDLLIV+SDSGKLSFLTFCN+MHRF  ++HI+LS+PGNSR+Q+GRM
Sbjct: 91   WNERFRPSYTQMLGKDLLIVISDSGKLSFLTFCNKMHRFLPMTHIQLSNPGNSRNQIGRM 150

Query: 182  LAVDSIGCFGAVSAYEGQLALFSVSISAGSNIVDKEIFYSPENKGDTRTARGIQRTNIGG 361
            LA DS GCF A SAYE +LALFS SISAGS+IVDK I Y P+++GD+   R +Q+ +I G
Sbjct: 151  LASDSSGCFIAASAYENRLALFSTSISAGSDIVDKRITYPPDSEGDSVAPRSMQKASICG 210

Query: 362  TIWSMCFISKDINLLSKDAPDPVLAIILHRKGAVLNELLLLGWDTSEHSTYVLSQYTEPG 541
            TIWSMCFISKD   L++D  +P+LA++L+R+GA+LNELLLLGW+  E + +V+ Q+ E G
Sbjct: 211  TIWSMCFISKDRGHLTQDN-NPILAVLLNRRGAILNELLLLGWNIREQTIHVICQFLEDG 269

Query: 542  PLALNIVEVPYGYGFALLFRIGDALLMDLRDPRSPCCVYRTNLNTLPSKLEEQNSVEQSS 721
            PLA  +VEVP  YGFALLFR+GDALLMDLRD  SPCCVYR  L+  P+   EQN +E+S 
Sbjct: 270  PLAYEVVEVPQSYGFALLFRVGDALLMDLRDVHSPCCVYRIGLHFPPNV--EQNFIEESY 327

Query: 722  RGLDVDDEGSFNVAACALLELRDPRMEITRGDDPMNIDSDSGKGSTSRL-ACSWSWEPGN 898
            R  D DDEG FNVAACALLELRD         DPM IDSD G  +T++   CSWSWEPGN
Sbjct: 328  RVQDADDEGLFNVAACALLELRDY--------DPMCIDSDDGSLNTNQNHVCSWSWEPGN 379

Query: 899  TSTARMIFGLDTGELYTMEISFDIDGVKVSWSDCLYRGLPCKTILWARGGFIVALVEMGD 1078
                RMIF +DTG+L+ +E++FD DG+KV+ S CLY+G P K +LW  GG++ ALVEMGD
Sbjct: 380  NRNRRMIFCMDTGDLFMIEMNFDSDGLKVNQSACLYKGQPYKALLWVEGGYLAALVEMGD 439

Query: 1079 GMVLQFGNERLLYRSAIQNIAPILDMSVVDFRDEKQDQMFACCGMAPEGSLRIIRSGIIV 1258
            GMVL+  N RL+Y + IQNIAPILDMSVVD  DEKQDQMFACCGMAPEGSLRIIR+GI V
Sbjct: 440  GMVLKLENGRLIYANPIQNIAPILDMSVVDKHDEKQDQMFACCGMAPEGSLRIIRNGISV 499

Query: 1259 EKLLRTAPIYQGITGIWTTRMKIVDCYHSFLVLSFVEETRVLSVGLSFNDVTDAVGFQTD 1438
            E LLRT+PIYQGIT IWT +MK  D YHS+LVLSFVEETRVLSVGLSF DVTD+VGFQ+D
Sbjct: 500  ENLLRTSPIYQGITSIWTIKMKRSDTYHSYLVLSFVEETRVLSVGLSFIDVTDSVGFQSD 559

Query: 1439 ACTLACGLVGDGLLVQIHTNAVRLCLPTTAAHPEGIPLSAPICTSWFPHNVSISLGAAGP 1618
             CTLACGL+ DGL++QIH NAVRLCLPT  AH EGI LS+P CTSWFP N+ ISLGA G 
Sbjct: 560  TCTLACGLLDDGLVIQIHQNAVRLCLPTKIAHSEGIELSSPACTSWFPDNIGISLGAVGH 619

Query: 1619 NLIVVATSSPCFLYILGVRSLSAYHYELYEMQHVRLQNEVS 1741
            N+IVV+TS+PCFL+ILGVR +S Y YE+YE Q++RLQ E+S
Sbjct: 620  NVIVVSTSNPCFLFILGVRKVSGYDYEIYEKQYLRLQYELS 660


>ref|XP_004136549.1| PREDICTED: pre-mRNA-splicing factor RSE1-like [Cucumis sativus]
          Length = 1376

 Score =  775 bits (2002), Expect = 0.0
 Identities = 388/581 (66%), Positives = 464/581 (79%), Gaps = 1/581 (0%)
 Frame = +2

Query: 2    WNENYRAPDPQTLGKDLLIVLSDSGKLSFLTFCNEMHRFFAVSHIRLSDPGNSRHQLGRM 181
            WNE +R    Q LGKDLLIV+SDSGKLSFLTFCN+MHRF  ++HI+LS+PGNSR+Q+GRM
Sbjct: 91   WNERFRPSYTQMLGKDLLIVISDSGKLSFLTFCNKMHRFLPMTHIQLSNPGNSRNQIGRM 150

Query: 182  LAVDSIGCFGAVSAYEGQLALFSVSISAGSNIVDKEIFYSPENKGDTRTARGIQRTNIGG 361
            LA DS GCF A SAYE +LALFS SISAGS+IVDK I Y P+++GD+   R +Q+ +I G
Sbjct: 151  LASDSSGCFIAASAYENRLALFSTSISAGSDIVDKRITYPPDSEGDSVAPRSMQKASICG 210

Query: 362  TIWSMCFISKDINLLSKDAPDPVLAIILHRKGAVLNELLLLGWDTSEHSTYVLSQYTEPG 541
            TIWSMCFISKD   L++D  +P+LA++L+R+GA+LNELLLLGW+  E + +V+ Q+ E G
Sbjct: 211  TIWSMCFISKDRGHLTQDN-NPILAVLLNRRGAILNELLLLGWNIREQTIHVICQFLEDG 269

Query: 542  PLALNIVEVPYGYGFALLFRIGDALLMDLRDPRSPCCVYRTNLNTLPSKLEEQNSVEQSS 721
            PLA  +VEVP  YGFALLFR+GDALLMDLRD  SPCCVYR  L+  P+   EQN +E+S 
Sbjct: 270  PLAYEVVEVPQSYGFALLFRVGDALLMDLRDVHSPCCVYRIGLHFPPNV--EQNFIEESY 327

Query: 722  RGLDVDDEGSFNVAACALLELRDPRMEITRGDDPMNIDSDSGKGSTSRL-ACSWSWEPGN 898
            R  D DDEG FNVAACALLELRD         DPM IDSD G  +T++   CSWSWEPGN
Sbjct: 328  RVQDADDEGLFNVAACALLELRDY--------DPMCIDSDDGSLNTNQNHVCSWSWEPGN 379

Query: 899  TSTARMIFGLDTGELYTMEISFDIDGVKVSWSDCLYRGLPCKTILWARGGFIVALVEMGD 1078
                RMIF +DTG+L+ +E++FD DG+KV+ S CLY+G P K +LW  GG++ ALVEMGD
Sbjct: 380  NRNRRMIFCMDTGDLFMIEMNFDSDGLKVNQSACLYKGQPYKALLWVEGGYLAALVEMGD 439

Query: 1079 GMVLQFGNERLLYRSAIQNIAPILDMSVVDFRDEKQDQMFACCGMAPEGSLRIIRSGIIV 1258
            GMVL+  N RL+Y + IQNIAPILDMSVVD  DEKQDQMFACCGMAPEGSLRIIR+GI V
Sbjct: 440  GMVLKLENGRLIYANPIQNIAPILDMSVVDKHDEKQDQMFACCGMAPEGSLRIIRNGISV 499

Query: 1259 EKLLRTAPIYQGITGIWTTRMKIVDCYHSFLVLSFVEETRVLSVGLSFNDVTDAVGFQTD 1438
            E LLRT+PIYQGIT IWT +MK  D YHS+LVLSFVEETRVLSVGLSF DVTD+VGFQ+D
Sbjct: 500  ENLLRTSPIYQGITSIWTIKMKRSDTYHSYLVLSFVEETRVLSVGLSFIDVTDSVGFQSD 559

Query: 1439 ACTLACGLVGDGLLVQIHTNAVRLCLPTTAAHPEGIPLSAPICTSWFPHNVSISLGAAGP 1618
             CTLACGL+ DGL++QIH NAVRLCLPT  AH EGI LS+P CTSWFP N+ ISLGA G 
Sbjct: 560  TCTLACGLLDDGLVIQIHQNAVRLCLPTKIAHSEGIELSSPACTSWFPDNIGISLGAVGH 619

Query: 1619 NLIVVATSSPCFLYILGVRSLSAYHYELYEMQHVRLQNEVS 1741
            N+IVV+TS+PCFL+ILGVR +S Y YE+YE Q++RLQ E+S
Sbjct: 620  NVIVVSTSNPCFLFILGVRKVSGYDYEIYEKQYLRLQYELS 660


Top