BLASTX nr result

ID: Coptis21_contig00004294 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00004294
         (661 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003596166.1| Elongation factor EF-2 [Medicago truncatula]...   176   5e-42
ref|XP_003596186.1| Elongation factor EF-2 [Medicago truncatula]...   176   5e-42
ref|XP_002882796.1| hypothetical protein ARALYDRAFT_318060 [Arab...   175   8e-42
ref|XP_002456335.1| hypothetical protein SORBIDRAFT_03g034200 [S...   173   3e-41
ref|NP_001046972.1| Os02g0519900 [Oryza sativa Japonica Group] g...   172   5e-41

>ref|XP_003596166.1| Elongation factor EF-2 [Medicago truncatula]
            gi|355485214|gb|AES66417.1| Elongation factor EF-2
            [Medicago truncatula]
          Length = 843

 Score =  176 bits (445), Expect = 5e-42
 Identities = 100/157 (63%), Positives = 106/157 (67%)
 Frame = +2

Query: 2    ARRVIYASQITAKPRLLEPVYMVEIQAAPERACSGIYEVLLRKRGWISNEAQRPGTRLYD 181
            ARRV YASQ+TAKPRLLEPVYMVEIQA PE+A  GIY VL +KRG +  E QRPGT LY+
Sbjct: 710  ARRVFYASQLTAKPRLLEPVYMVEIQA-PEQALGGIYSVLNQKRGHVFEEMQRPGTPLYN 768

Query: 182  IKAYLPVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQLRAATSGQVFPVCVFDHWQKMP 361
            IKAYLPV                              QLRAATSGQ FP CVFDHW  M 
Sbjct: 769  IKAYLPV----------------------IESFGFSSQLRAATSGQAFPQCVFDHWDMMS 806

Query: 362  SDPLEAGSQAATLVFETRKRKGLKMQMPLLSEFEDKL 472
            SDPLEAGSQAATLV + RKRKGLK QM  LSEFEDKL
Sbjct: 807  SDPLEAGSQAATLVTDIRKRKGLKEQMTPLSEFEDKL 843


>ref|XP_003596186.1| Elongation factor EF-2 [Medicago truncatula]
            gi|355485234|gb|AES66437.1| Elongation factor EF-2
            [Medicago truncatula]
          Length = 843

 Score =  176 bits (445), Expect = 5e-42
 Identities = 100/157 (63%), Positives = 106/157 (67%)
 Frame = +2

Query: 2    ARRVIYASQITAKPRLLEPVYMVEIQAAPERACSGIYEVLLRKRGWISNEAQRPGTRLYD 181
            ARRV YASQ+TAKPRLLEPVYMVEIQA PE+A  GIY VL +KRG +  E QRPGT LY+
Sbjct: 710  ARRVFYASQLTAKPRLLEPVYMVEIQA-PEQALGGIYSVLNQKRGHVFEEMQRPGTPLYN 768

Query: 182  IKAYLPVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQLRAATSGQVFPVCVFDHWQKMP 361
            IKAYLPV                              QLRAATSGQ FP CVFDHW  M 
Sbjct: 769  IKAYLPV----------------------IESFGFSSQLRAATSGQAFPQCVFDHWDMMS 806

Query: 362  SDPLEAGSQAATLVFETRKRKGLKMQMPLLSEFEDKL 472
            SDPLEAGSQAATLV + RKRKGLK QM  LSEFEDKL
Sbjct: 807  SDPLEAGSQAATLVTDIRKRKGLKEQMTPLSEFEDKL 843


>ref|XP_002882796.1| hypothetical protein ARALYDRAFT_318060 [Arabidopsis lyrata subsp.
            lyrata] gi|297328636|gb|EFH59055.1| hypothetical protein
            ARALYDRAFT_318060 [Arabidopsis lyrata subsp. lyrata]
          Length = 832

 Score =  175 bits (443), Expect = 8e-42
 Identities = 99/157 (63%), Positives = 106/157 (67%)
 Frame = +2

Query: 2    ARRVIYASQITAKPRLLEPVYMVEIQAAPERACSGIYEVLLRKRGWISNEAQRPGTRLYD 181
            ARR IYASQ+TAKPRLLEPVYMVEIQA PE A  GIY VL +KRG +  E QRPGT LY+
Sbjct: 699  ARRAIYASQLTAKPRLLEPVYMVEIQA-PEGALGGIYSVLNQKRGHVFEEMQRPGTPLYN 757

Query: 182  IKAYLPVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQLRAATSGQVFPVCVFDHWQKMP 361
            IKAYLPV                              QLRAATSGQ FP CVFDHW  M 
Sbjct: 758  IKAYLPVVESFNFSG----------------------QLRAATSGQAFPQCVFDHWDMMS 795

Query: 362  SDPLEAGSQAATLVFETRKRKGLKMQMPLLSEFEDKL 472
            SDPLEAGSQAATLV + RKRKGLK+QM  LS+FEDKL
Sbjct: 796  SDPLEAGSQAATLVADIRKRKGLKLQMTPLSDFEDKL 832


>ref|XP_002456335.1| hypothetical protein SORBIDRAFT_03g034200 [Sorghum bicolor]
            gi|241928310|gb|EES01455.1| hypothetical protein
            SORBIDRAFT_03g034200 [Sorghum bicolor]
          Length = 843

 Score =  173 bits (438), Expect = 3e-41
 Identities = 99/157 (63%), Positives = 105/157 (66%)
 Frame = +2

Query: 2    ARRVIYASQITAKPRLLEPVYMVEIQAAPERACSGIYEVLLRKRGWISNEAQRPGTRLYD 181
            ARRVIYASQ+TAKPRLLEPVY+VEIQA PE A  GIY VL +KRG +  E QRPGT LY+
Sbjct: 710  ARRVIYASQLTAKPRLLEPVYLVEIQA-PENALGGIYGVLNQKRGHVFEEMQRPGTPLYN 768

Query: 182  IKAYLPVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQLRAATSGQVFPVCVFDHWQKMP 361
            IKAYLPV                              QLRAATSGQ FP CVFDHW  M 
Sbjct: 769  IKAYLPV----------------------IESFGFSSQLRAATSGQAFPQCVFDHWDMMG 806

Query: 362  SDPLEAGSQAATLVFETRKRKGLKMQMPLLSEFEDKL 472
            SDPLEAGSQAA LV + RKRKGLK QM  LSEFEDKL
Sbjct: 807  SDPLEAGSQAAQLVLDIRKRKGLKEQMTPLSEFEDKL 843


>ref|NP_001046972.1| Os02g0519900 [Oryza sativa Japonica Group]
            gi|49387779|dbj|BAD26337.1| putative elongation factor 2
            [Oryza sativa Japonica Group]
            gi|113536503|dbj|BAF08886.1| Os02g0519900 [Oryza sativa
            Japonica Group] gi|119395216|gb|ABL74569.1| elongation
            factor 2 [Oryza sativa Japonica Group]
            gi|125539668|gb|EAY86063.1| hypothetical protein
            OsI_07431 [Oryza sativa Indica Group]
            gi|125582310|gb|EAZ23241.1| hypothetical protein
            OsJ_06933 [Oryza sativa Japonica Group]
          Length = 843

 Score =  172 bits (436), Expect = 5e-41
 Identities = 98/157 (62%), Positives = 106/157 (67%)
 Frame = +2

Query: 2    ARRVIYASQITAKPRLLEPVYMVEIQAAPERACSGIYEVLLRKRGWISNEAQRPGTRLYD 181
            ARRVIYASQ+TAKPRLLEPVY+VEIQA PE A  GIY VL +KRG +  E QRPGT LY+
Sbjct: 710  ARRVIYASQLTAKPRLLEPVYLVEIQA-PENALGGIYGVLNQKRGHVFEEMQRPGTPLYN 768

Query: 182  IKAYLPVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQLRAATSGQVFPVCVFDHWQKMP 361
            IKAYLPV                              QLRAATSGQ FP CVFDHW  M 
Sbjct: 769  IKAYLPV----------------------IESFGFSSQLRAATSGQAFPQCVFDHWDMMT 806

Query: 362  SDPLEAGSQAATLVFETRKRKGLKMQMPLLSEFEDKL 472
            SDPLEAGSQA+TLV + RKRKGLK QM  LS+FEDKL
Sbjct: 807  SDPLEAGSQASTLVQDIRKRKGLKEQMTPLSDFEDKL 843


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