BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00004292
         (1058 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268905.1| PREDICTED: probable ATP-dependent RNA helica...   331   2e-88
ref|XP_004162448.1| PREDICTED: LOW QUALITY PROTEIN: probable ATP...   323   3e-86
ref|XP_004136163.1| PREDICTED: probable ATP-dependent RNA helica...   323   3e-86
emb|CBI36896.3| unnamed protein product [Vitis vinifera]              308   2e-81
ref|XP_002523130.1| ATP-dependent RNA helicase, putative [Ricinu...   308   2e-81

>ref|XP_002268905.1| PREDICTED: probable ATP-dependent RNA helicase DHX37-like [Vitis
            vinifera]
          Length = 1414

 Score =  331 bits (849), Expect = 2e-88
 Identities = 184/303 (60%), Positives = 211/303 (69%), Gaps = 1/303 (0%)
 Frame = +1

Query: 130  ENAGKHVDVLGEPSSLSALKAAFESLARKHPPNAXXXXXXXXXXPSTKG-CSISPPFVSE 306
            E+ G  VD+LGE  SL++LKAAF++LA K   N           P T G CS        
Sbjct: 718  EDDGNLVDILGEDRSLASLKAAFDALAGKTAIN--HNSKGEEVVPDTPGRCSDQSNPNMG 775

Query: 307  EKPRGPSVPCAGGLHVLPLYAMLPAAAQLRVFDKVKEEERLVVVATNVAETSLTIPGIKY 486
            +K  G +   AG L VLPLYAMLPAAAQLRVF+++KE ERLVVVATNVAETSLTIPGIKY
Sbjct: 776  KKRDGENDLSAGALCVLPLYAMLPAAAQLRVFEEIKEGERLVVVATNVAETSLTIPGIKY 835

Query: 487  VVDTGREKVKKYNSTNGMEEYKVQWISKXXXXXXXXXXXXXXPGYCYRLYSKAAFSNIFP 666
            VVDTGREKVK Y+ +NGME Y+VQWISK              PG+CYRLYS A F+NI P
Sbjct: 836  VVDTGREKVKNYDHSNGMETYEVQWISKASAAQRAGRAGRTGPGHCYRLYSSAVFNNILP 895

Query: 667  DFSSAEISKIPVDGVVLLMKSMGIDKVANFPFPTPPXXXXXXXXXXXXXXXXXXDNFGRL 846
            DFS AEI K+PV+GV+LLMKSM IDKVANFPFPTPP                  ++ GRL
Sbjct: 896  DFSMAEILKVPVEGVILLMKSMDIDKVANFPFPTPPDAIALAEAERCLKALEALNSKGRL 955

Query: 847  SLLGKAMAQYPMSPRHSRMLLTVIQILAKVQGYAKVNLVFGYTVAAAAALSLSNPFIMQS 1026
            + LGKAMA YPMSPRHSRMLLTVIQI+ K +GYA+ NLV GY VAAAAALSL NPF+MQ 
Sbjct: 956  TPLGKAMAHYPMSPRHSRMLLTVIQIMRKAKGYARANLVLGYAVAAAAALSLPNPFVMQF 1015

Query: 1027 GGS 1035
             G+
Sbjct: 1016 EGN 1018


>ref|XP_004162448.1| PREDICTED: LOW QUALITY PROTEIN: probable ATP-dependent RNA helicase
            DHX37-like [Cucumis sativus]
          Length = 1333

 Score =  323 bits (829), Expect = 3e-86
 Identities = 178/302 (58%), Positives = 205/302 (67%)
 Frame = +1

Query: 130  ENAGKHVDVLGEPSSLSALKAAFESLARKHPPNAXXXXXXXXXXPSTKGCSISPPFVSEE 309
            E  G   DV+ + +S+S+LKAAF++L RK+  +                       + E 
Sbjct: 641  ETDGNLTDVVMDDASMSSLKAAFDALDRKNALDLDKRQVDHTTDEDLSSKQCVSARLKEN 700

Query: 310  KPRGPSVPCAGGLHVLPLYAMLPAAAQLRVFDKVKEEERLVVVATNVAETSLTIPGIKYV 489
               G SV   G LHVLPLYAMLPAAAQLRVF++VKE ERLVVVATNVAETSLTIPGIKYV
Sbjct: 701  VEFGFSV---GALHVLPLYAMLPAAAQLRVFEEVKEGERLVVVATNVAETSLTIPGIKYV 757

Query: 490  VDTGREKVKKYNSTNGMEEYKVQWISKXXXXXXXXXXXXXXPGYCYRLYSKAAFSNIFPD 669
            VDTGREKVK YNS+NG+E Y+VQWISK              PG+CYRLYS A FSN  PD
Sbjct: 758  VDTGREKVKTYNSSNGIENYEVQWISKASAAQRAGRAGRTGPGHCYRLYSSAVFSNTLPD 817

Query: 670  FSSAEISKIPVDGVVLLMKSMGIDKVANFPFPTPPXXXXXXXXXXXXXXXXXXDNFGRLS 849
            FS AEI+KIPVDGVVLLMKSMGI KV NFPFPTPP                  D+ GRL+
Sbjct: 818  FSLAEIAKIPVDGVVLLMKSMGISKVVNFPFPTPPETSAVLEAESCLKALEALDSGGRLT 877

Query: 850  LLGKAMAQYPMSPRHSRMLLTVIQILAKVQGYAKVNLVFGYTVAAAAALSLSNPFIMQSG 1029
             LGKAMAQYP+SPRHSRMLLTVIQI+  ++ Y + NLV  Y+VAAAAALS+SNPF+M   
Sbjct: 878  ALGKAMAQYPLSPRHSRMLLTVIQIMRNLKNYDRANLVLAYSVAAAAALSMSNPFVMMFE 937

Query: 1030 GS 1035
            GS
Sbjct: 938  GS 939


>ref|XP_004136163.1| PREDICTED: probable ATP-dependent RNA helicase DHX37-like [Cucumis
            sativus]
          Length = 1333

 Score =  323 bits (829), Expect = 3e-86
 Identities = 178/302 (58%), Positives = 205/302 (67%)
 Frame = +1

Query: 130  ENAGKHVDVLGEPSSLSALKAAFESLARKHPPNAXXXXXXXXXXPSTKGCSISPPFVSEE 309
            E  G   DV+ + +S+S+LKAAF++L RK+  +                       + E 
Sbjct: 641  ETDGNLTDVVMDDASMSSLKAAFDALDRKNALDLDKRQVDHTTDEDLSSKQCVSARLKEN 700

Query: 310  KPRGPSVPCAGGLHVLPLYAMLPAAAQLRVFDKVKEEERLVVVATNVAETSLTIPGIKYV 489
               G SV   G LHVLPLYAMLPAAAQLRVF++VKE ERLVVVATNVAETSLTIPGIKYV
Sbjct: 701  VEFGFSV---GALHVLPLYAMLPAAAQLRVFEEVKEGERLVVVATNVAETSLTIPGIKYV 757

Query: 490  VDTGREKVKKYNSTNGMEEYKVQWISKXXXXXXXXXXXXXXPGYCYRLYSKAAFSNIFPD 669
            VDTGREKVK YNS+NG+E Y+VQWISK              PG+CYRLYS A FSN  PD
Sbjct: 758  VDTGREKVKTYNSSNGIENYEVQWISKASAAQRAGRAGRTGPGHCYRLYSSAVFSNTLPD 817

Query: 670  FSSAEISKIPVDGVVLLMKSMGIDKVANFPFPTPPXXXXXXXXXXXXXXXXXXDNFGRLS 849
            FS AEI+KIPVDGVVLLMKSMGI KV NFPFPTPP                  D+ GRL+
Sbjct: 818  FSLAEIAKIPVDGVVLLMKSMGISKVVNFPFPTPPETSAVLEAESCLKALEALDSGGRLT 877

Query: 850  LLGKAMAQYPMSPRHSRMLLTVIQILAKVQGYAKVNLVFGYTVAAAAALSLSNPFIMQSG 1029
             LGKAMAQYP+SPRHSRMLLTVIQI+  ++ Y + NLV  Y+VAAAAALS+SNPF+M   
Sbjct: 878  ALGKAMAQYPLSPRHSRMLLTVIQIMRNLKNYDRANLVLAYSVAAAAALSMSNPFVMMFE 937

Query: 1030 GS 1035
            GS
Sbjct: 938  GS 939


>emb|CBI36896.3| unnamed protein product [Vitis vinifera]
          Length = 1098

 Score =  308 bits (788), Expect = 2e-81
 Identities = 159/233 (68%), Positives = 178/233 (76%)
 Frame = +1

Query: 337  AGGLHVLPLYAMLPAAAQLRVFDKVKEEERLVVVATNVAETSLTIPGIKYVVDTGREKVK 516
            AG L VLPLYAMLPAAAQLRVF+++KE ERLVVVATNVAETSLTIPGIKYVVDTGREKVK
Sbjct: 545  AGALCVLPLYAMLPAAAQLRVFEEIKEGERLVVVATNVAETSLTIPGIKYVVDTGREKVK 604

Query: 517  KYNSTNGMEEYKVQWISKXXXXXXXXXXXXXXPGYCYRLYSKAAFSNIFPDFSSAEISKI 696
             Y+ +NGME Y+VQWISK              PG+CYRLYS A F+NI PDFS AEI K+
Sbjct: 605  NYDHSNGMETYEVQWISKASAAQRAGRAGRTGPGHCYRLYSSAVFNNILPDFSMAEILKV 664

Query: 697  PVDGVVLLMKSMGIDKVANFPFPTPPXXXXXXXXXXXXXXXXXXDNFGRLSLLGKAMAQY 876
            PV+GV+LLMKSM IDKVANFPFPTPP                  ++ GRL+ LGKAMA Y
Sbjct: 665  PVEGVILLMKSMDIDKVANFPFPTPPDAIALAEAERCLKALEALNSKGRLTPLGKAMAHY 724

Query: 877  PMSPRHSRMLLTVIQILAKVQGYAKVNLVFGYTVAAAAALSLSNPFIMQSGGS 1035
            PMSPRHSRMLLTVIQI+ K +GYA+ NLV GY VAAAAALSL NPF+MQ  G+
Sbjct: 725  PMSPRHSRMLLTVIQIMRKAKGYARANLVLGYAVAAAAALSLPNPFVMQFEGN 777


>ref|XP_002523130.1| ATP-dependent RNA helicase, putative [Ricinus communis]
            gi|223537692|gb|EEF39315.1| ATP-dependent RNA helicase,
            putative [Ricinus communis]
          Length = 868

 Score =  308 bits (788), Expect = 2e-81
 Identities = 175/320 (54%), Positives = 204/320 (63%), Gaps = 11/320 (3%)
 Frame = +1

Query: 130  ENAGKHVDVLGEPSSLSALKAAFESLARKHPPNAXXXXXXXXXXPSTKGCSISPPFVSEE 309
            +N    +DVLGE  SLS+L+AAFE+LA K                 T       PFV EE
Sbjct: 187  KNGSNVLDVLGEEGSLSSLRAAFEALAGK-------------PESETNSEGKQTPFVPEE 233

Query: 310  -----------KPRGPSVPCAGGLHVLPLYAMLPAAAQLRVFDKVKEEERLVVVATNVAE 456
                         RG      G L VLPLYAMLPAAAQLR+FD+VKE ERLVVVATNVAE
Sbjct: 234  WVEQSNHSVGKNSRGGKGISIGALRVLPLYAMLPAAAQLRIFDEVKEGERLVVVATNVAE 293

Query: 457  TSLTIPGIKYVVDTGREKVKKYNSTNGMEEYKVQWISKXXXXXXXXXXXXXXPGYCYRLY 636
            TSLTIP IKYVVDTGREKVK YN +NGME Y++QWISK              PG+CYRLY
Sbjct: 294  TSLTIPAIKYVVDTGREKVKNYNPSNGMETYEIQWISKASAAQRAGRAGRTGPGHCYRLY 353

Query: 637  SKAAFSNIFPDFSSAEISKIPVDGVVLLMKSMGIDKVANFPFPTPPXXXXXXXXXXXXXX 816
            S A F+NI PDFS AEISK+P++ +VL++KSM + KV NFPFPTPP              
Sbjct: 354  SSAVFNNILPDFSCAEISKVPLENIVLILKSMSV-KVENFPFPTPPEANALKEAEDCLKI 412

Query: 817  XXXXDNFGRLSLLGKAMAQYPMSPRHSRMLLTVIQILAKVQGYAKVNLVFGYTVAAAAAL 996
                D  GRL+ LGKAM+ +PM PRHSRMLLTVIQIL K + +A+ +L+ GY  AAAAAL
Sbjct: 413  LEALDENGRLTALGKAMSYFPMGPRHSRMLLTVIQIL-KFRNFARPHLILGYAAAAAAAL 471

Query: 997  SLSNPFIMQSGGSSGDKNDL 1056
            SLSNPF++Q  GS  D N L
Sbjct: 472  SLSNPFLIQFEGSQDDNNVL 491