BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00004265
         (1545 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003548489.1| PREDICTED: B3 domain-containing transcriptio...   126   1e-26
ref|XP_003622675.1| B3 domain-containing transcription factor VR...   118   5e-24
gb|ABD32483.2| Transcriptional factor B3 [Medicago truncatula]        118   5e-24
emb|CBI40975.3| unnamed protein product [Vitis vinifera]              113   1e-22
ref|XP_002269140.2| PREDICTED: B3 domain-containing protein Os11...   110   1e-21

>ref|XP_003548489.1| PREDICTED: B3 domain-containing transcription factor VRN1-like
            [Glycine max]
          Length = 363

 Score =  126 bits (317), Expect = 1e-26
 Identities = 87/275 (31%), Positives = 132/275 (48%), Gaps = 14/275 (5%)
 Frame = -1

Query: 1317 IPKKFVCKYGKYLPDVVALKDPSDAVWHVELKNVDGDVWIRSGWQEFIEHHSICAGHFLI 1138
            IP KFV KYG+ LP+ + LK P+   W+  L+  DG +W + GW+EF E+HS+  GH L+
Sbjct: 33   IPNKFVEKYGEGLPNALFLKTPNGTEWNFNLEKHDGKIWFQKGWKEFAEYHSLAHGHLLV 92

Query: 1137 FKYDGKSQFYVLIFDMSGNEIDYLPKGL------HNDGEKCCVPEKEXXXXXXXXXXXXX 976
            F+  G S F V IFD+S  EIDY  KG       +++G K   P  E             
Sbjct: 93   FRRHGTSHFQVHIFDLSSLEIDYPSKGTEGKTSPNHEGNK--QPRNEENLEYLQPYQVRS 150

Query: 975  XXXXXXXXXXDGDDSIXXXXXXXRASVTRIPVNTEEKDGVIQKASSFESKFPFFKVSMQP 796
                         +             +++ V  +     +  ASSF+   PFF V M+P
Sbjct: 151  HKSVKVENMMTLPEEAQPHTDTKFKEKSKVVVANQVT--ALDLASSFKPCNPFFLVVMRP 208

Query: 795  SYMKGRYVPMPV--SFYRRYLPEGL---DRIRIQASDGR---RKWLVRCFPSCGHMRLNN 640
            SY++    P+P+   F RR+   GL     I +Q  +GR    K++++   +  + RL +
Sbjct: 209  SYIQSNGGPLPLQTKFCRRHF--GLLNKRHINLQVLNGRIWPAKYMIQKMKNKTNFRLTS 266

Query: 639  GVSHFMLECNVKIGDTCVFELIKKKDPVLKANILR 535
            G   F+ + N+K+G+ C FELI      L  +I R
Sbjct: 267  GWKTFVKDNNLKVGNVCTFELIDGTKLTLLVHIFR 301


>ref|XP_003622675.1| B3 domain-containing transcription factor VRN1 [Medicago truncatula]
            gi|355497690|gb|AES78893.1| B3 domain-containing
            transcription factor VRN1 [Medicago truncatula]
          Length = 341

 Score =  118 bits (295), Expect = 5e-24
 Identities = 86/269 (31%), Positives = 128/269 (47%), Gaps = 20/269 (7%)
 Frame = -1

Query: 1320 RIPKKFVCKYGKYLPDVVALKDPSDAVWHVELKNVDGDVWIRSGWQEFIEHHSICAGHFL 1141
            R+P+KFV KYGK LP  + LK P+ A W + L   DG +W   GW++F EHHSI  GH L
Sbjct: 28   RMPRKFVEKYGKGLPKAICLKTPNGAKWRLNLVKSDGKIWFEKGWKQFAEHHSIGHGHLL 87

Query: 1140 IFKYDGKSQFYVLIFDMSGNEIDYLPKGLHN------------DGEKCCVPEKEXXXXXX 997
            +F+Y+  S+F V IF  S  EIDY  K + +            +GE C   +K       
Sbjct: 88   LFRYEKTSKFEVQIFGKSALEIDYSFKRVESKKFSNGQGNKPPNGENCRAAQKRKANSSS 147

Query: 996  XXXXXXXXXXXXXXXXXDGDDSIXXXXXXXRASVTRIPVNTEEKDGVIQKASSFESKFPF 817
                              G           R S  +  + T +K   +++A SF+   P 
Sbjct: 148  EFHRQCEIASSSCVKF--GKSQKLAVQQVDRMSNGKQVITTAKKVTTLERAQSFKICNPS 205

Query: 816  FKVSMQPSYMKGRY-VPMPVSFYRRY--LPEGLDRIRIQASDGR---RKWLVRCFPSCGH 655
            F V M  SY++ R+ + +P  F + +  L +  + I++QA +GR    ++  R   S   
Sbjct: 206  FVVVMGASYVERRFLLNIPCLFGKTHFDLNKKREDIQLQALNGRVWSARYSTRNRTSDNG 265

Query: 654  MR--LNNGVSHFMLECNVKIGDTCVFELI 574
            +R  L +G   F  + N+K+GD C FELI
Sbjct: 266  IRFELTSGWEEFAKDNNLKVGDVCKFELI 294


>gb|ABD32483.2| Transcriptional factor B3 [Medicago truncatula]
          Length = 329

 Score =  118 bits (295), Expect = 5e-24
 Identities = 86/269 (31%), Positives = 128/269 (47%), Gaps = 20/269 (7%)
 Frame = -1

Query: 1320 RIPKKFVCKYGKYLPDVVALKDPSDAVWHVELKNVDGDVWIRSGWQEFIEHHSICAGHFL 1141
            R+P+KFV KYGK LP  + LK P+ A W + L   DG +W   GW++F EHHSI  GH L
Sbjct: 33   RMPRKFVEKYGKGLPKAICLKTPNGAKWRLNLVKSDGKIWFEKGWKQFAEHHSIGHGHLL 92

Query: 1140 IFKYDGKSQFYVLIFDMSGNEIDYLPKGLHN------------DGEKCCVPEKEXXXXXX 997
            +F+Y+  S+F V IF  S  EIDY  K + +            +GE C   +K       
Sbjct: 93   LFRYEKTSKFEVQIFGKSALEIDYSFKRVESKKFSNGQGNKPPNGENCRAAQKRKANSSS 152

Query: 996  XXXXXXXXXXXXXXXXXDGDDSIXXXXXXXRASVTRIPVNTEEKDGVIQKASSFESKFPF 817
                              G           R S  +  + T +K   +++A SF+   P 
Sbjct: 153  EFHRQCEIASSSCVKF--GKSQKLAVQQVDRMSNGKQVITTAKKVTTLERAQSFKICNPS 210

Query: 816  FKVSMQPSYMKGRY-VPMPVSFYRRY--LPEGLDRIRIQASDGR---RKWLVRCFPSCGH 655
            F V M  SY++ R+ + +P  F + +  L +  + I++QA +GR    ++  R   S   
Sbjct: 211  FVVVMGASYVERRFLLNIPCLFGKTHFDLNKKREDIQLQALNGRVWSARYSTRNRTSDNG 270

Query: 654  MR--LNNGVSHFMLECNVKIGDTCVFELI 574
            +R  L +G   F  + N+K+GD C FELI
Sbjct: 271  IRFELTSGWEEFAKDNNLKVGDVCKFELI 299


>emb|CBI40975.3| unnamed protein product [Vitis vinifera]
          Length = 399

 Score =  113 bits (283), Expect = 1e-22
 Identities = 49/88 (55%), Positives = 68/88 (77%)
 Frame = -1

Query: 1332 CTMQRIPKKFVCKYGKYLPDVVALKDPSDAVWHVELKNVDGDVWIRSGWQEFIEHHSICA 1153
            C  Q IPK+FV +YGK L +++ LK PS AVW V LK  DG+VW+  GW+EF+E++SI  
Sbjct: 29   CFSQGIPKRFVSRYGKNLSNIMFLKVPSGAVWQVGLKRGDGEVWLDGGWREFVEYYSIGY 88

Query: 1152 GHFLIFKYDGKSQFYVLIFDMSGNEIDY 1069
            GHFL+F+Y+G S F++LIFDM+ +EI+Y
Sbjct: 89   GHFLVFRYEGNSIFHILIFDMTASEIEY 116


>ref|XP_002269140.2| PREDICTED: B3 domain-containing protein Os11g0197600-like [Vitis
            vinifera]
          Length = 598

 Score =  110 bits (274), Expect = 1e-21
 Identities = 47/83 (56%), Positives = 66/83 (79%)
 Frame = -1

Query: 1317 IPKKFVCKYGKYLPDVVALKDPSDAVWHVELKNVDGDVWIRSGWQEFIEHHSICAGHFLI 1138
            IPK+FV +YGK L +++ LK PS AVW V LK  DG+VW+  GW+EF+E++SI  GHFL+
Sbjct: 206  IPKRFVSRYGKNLSNIMFLKVPSGAVWQVGLKRGDGEVWLDGGWREFVEYYSIGYGHFLV 265

Query: 1137 FKYDGKSQFYVLIFDMSGNEIDY 1069
            F+Y+G S F++LIFDM+ +EI+Y
Sbjct: 266  FRYEGNSIFHILIFDMTASEIEY 288