BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00004191
         (1283 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002303732.1| predicted protein [Populus trichocarpa] gi|2...   355   2e-95
ref|XP_002299368.1| predicted protein [Populus trichocarpa] gi|2...   352   2e-94
ref|XP_002512712.1| U2 small nuclear ribonucleoprotein A, putati...   347   3e-93
ref|XP_002275396.1| PREDICTED: U2 small nuclear ribonucleoprotei...   347   5e-93
gb|ADG27843.1| U2 small nuclear ribonucleoprotein A [Gossypium h...   343   7e-92

>ref|XP_002303732.1| predicted protein [Populus trichocarpa] gi|222841164|gb|EEE78711.1|
           predicted protein [Populus trichocarpa]
          Length = 284

 Score =  355 bits (910), Expect = 2e-95
 Identities = 189/287 (65%), Positives = 214/287 (74%)
 Frame = +2

Query: 89  MVRLTADLIWKSPHFFNAVSDRELDLRGNKISVLENLGATEDQFDTVDLSDNEIVKLENF 268
           MVRLTADLIWKSPHFFNA+ +RELDLRGNKI V+ENLGATEDQFDT+DLSDNEIVKLEN 
Sbjct: 1   MVRLTADLIWKSPHFFNAIKERELDLRGNKIPVIENLGATEDQFDTIDLSDNEIVKLENM 60

Query: 269 PFLARLGXXXXXXXXXXXXXXXXGDYLPKXXXXXXXXXXXXXXXEIDPLASLTKLRFLTL 448
           P+L RLG                G+YLPK               EIDPL+SL KL+FL+L
Sbjct: 61  PYLNRLGTLIINNNRITRINPNIGEYLPKLHTLVLTNNRLVNLAEIDPLSSLPKLQFLSL 120

Query: 449 LDNNITKKPNYRLYVIFKLKSLRVLDFNKVKHKERIEAENLFASKEAEEEVRREPAKTFT 628
           LDN ITKKPNYRLYVI KLKSLRVLDF KVK KER EAE+LF+SKE EEE +RE  KTFT
Sbjct: 121 LDNTITKKPNYRLYVIHKLKSLRVLDFKKVKAKERAEAEHLFSSKEVEEEAKRESVKTFT 180

Query: 629 PGELQNVPESPKEDQTPTVTAPTPEQIIAIKAAIVNSQTLEEVARLEKALKSGQLPADLK 808
           PGE+ N+PE  +E Q P V APTPEQIIAIKAAIVNSQTLEEVARLEKAL SGQLPADLK
Sbjct: 181 PGEIPNIPEVAEEQQAPKVVAPTPEQIIAIKAAIVNSQTLEEVARLEKALNSGQLPADLK 240

Query: 809 IPGDEKATDVRSQDDKMEVDAKNGATEQLDDAEHQQKNDGLATMEQD 949
           I  D  +  V+ QDDKM  D++N A  + ++ E Q+ N+    MEQ+
Sbjct: 241 ILDDTGSNSVKEQDDKMATDSQNEA--EPNNLEEQKDNEA-TPMEQE 284


>ref|XP_002299368.1| predicted protein [Populus trichocarpa] gi|222846626|gb|EEE84173.1|
           predicted protein [Populus trichocarpa]
          Length = 284

 Score =  352 bits (902), Expect = 2e-94
 Identities = 190/287 (66%), Positives = 211/287 (73%)
 Frame = +2

Query: 89  MVRLTADLIWKSPHFFNAVSDRELDLRGNKISVLENLGATEDQFDTVDLSDNEIVKLENF 268
           MVRLTADL+WKSPHFFNA+ +RELDLRGNKI V+ENLGATEDQFDT+DLSDNEIVKLEN 
Sbjct: 1   MVRLTADLVWKSPHFFNAIKERELDLRGNKIPVIENLGATEDQFDTIDLSDNEIVKLENM 60

Query: 269 PFLARLGXXXXXXXXXXXXXXXXGDYLPKXXXXXXXXXXXXXXXEIDPLASLTKLRFLTL 448
           P+L RLG                G+YLPK               EIDPLASL KL FL+L
Sbjct: 61  PYLNRLGTLIINNNRITRINPNIGEYLPKLHTLVLINNRLVNLAEIDPLASLPKLHFLSL 120

Query: 449 LDNNITKKPNYRLYVIFKLKSLRVLDFNKVKHKERIEAENLFASKEAEEEVRREPAKTFT 628
           LDNNITKKPNYRLYVI KLKSLRVLDF KVK KER EAE+LFASKE EEE RRE  KTFT
Sbjct: 121 LDNNITKKPNYRLYVIHKLKSLRVLDFKKVKGKERAEAEHLFASKEVEEEARRESVKTFT 180

Query: 629 PGELQNVPESPKEDQTPTVTAPTPEQIIAIKAAIVNSQTLEEVARLEKALKSGQLPADLK 808
           PGE+ NV E  +E Q P V APTP+QIIAIKAAIVNSQTLEEVARLEKAL SGQLPADLK
Sbjct: 181 PGEVPNVLEGAEEQQAPKVVAPTPDQIIAIKAAIVNSQTLEEVARLEKALNSGQLPADLK 240

Query: 809 IPGDEKATDVRSQDDKMEVDAKNGATEQLDDAEHQQKNDGLATMEQD 949
           I     +  V+ QDDKM  D +N A  + ++ E Q+ N+    MEQ+
Sbjct: 241 ILDGTGSNSVKEQDDKMATDNQNEA--EPNNLEEQKDNEA-TPMEQE 284


>ref|XP_002512712.1| U2 small nuclear ribonucleoprotein A, putative [Ricinus communis]
           gi|223548673|gb|EEF50164.1| U2 small nuclear
           ribonucleoprotein A, putative [Ricinus communis]
          Length = 287

 Score =  347 bits (891), Expect = 3e-93
 Identities = 185/288 (64%), Positives = 210/288 (72%), Gaps = 1/288 (0%)
 Frame = +2

Query: 89  MVRLTADLIWKSPHFFNAVSDRELDLRGNKISVLENLGATEDQFDTVDLSDNEIVKLENF 268
           MVRLTADLIWKSPHFFNA+ +RELDLRGNKI V+ENLGATEDQFDT+DLSDNEIVKLEN 
Sbjct: 1   MVRLTADLIWKSPHFFNAIKERELDLRGNKIPVIENLGATEDQFDTIDLSDNEIVKLENM 60

Query: 269 PFLARLGXXXXXXXXXXXXXXXXGDYLPKXXXXXXXXXXXXXXXEIDPLASLTKLRFLTL 448
           P+L RLG                G++LPK               EIDPLASL KL+FL+L
Sbjct: 61  PYLTRLGTLLINNNRITRINPNIGEFLPKLHTLVLTNNRLVNLVEIDPLASLPKLQFLSL 120

Query: 449 LDNNITKKPNYRLYVIFKLKSLRVLDFNKVKHKERIEAENLFASKEAEEEVRREPAKTFT 628
           LDN+ITKKPNYRLY+I KLKSLRVLDF KVK KER+EAENLFASKE EEE  RE AKTF 
Sbjct: 121 LDNSITKKPNYRLYIIHKLKSLRVLDFKKVKSKERMEAENLFASKEVEEEAIRESAKTFI 180

Query: 629 PGELQNVPESPKEDQTPTVTAPTPEQIIAIKAAIVNSQTLEEVARLEKALKSGQLPADLK 808
           PGE+ NV E  +E Q P V APTPEQIIAIKAAIVNSQTLEEVARLEKAL SGQ+P DL 
Sbjct: 181 PGEVPNVTEDAEEQQNPKVVAPTPEQIIAIKAAIVNSQTLEEVARLEKALNSGQIPTDLN 240

Query: 809 I-PGDEKATDVRSQDDKMEVDAKNGATEQLDDAEHQQKNDGLATMEQD 949
           I   D +   V+ +DDKM  D  N    +  + + Q+ +D  A+MEQ+
Sbjct: 241 IFDNDSELNTVQEKDDKMATDGDNKTDHEPSNLDEQKDSDS-ASMEQE 287


>ref|XP_002275396.1| PREDICTED: U2 small nuclear ribonucleoprotein A' [Vitis vinifera]
           gi|296085571|emb|CBI29303.3| unnamed protein product
           [Vitis vinifera]
          Length = 287

 Score =  347 bits (889), Expect = 5e-93
 Identities = 183/288 (63%), Positives = 215/288 (74%), Gaps = 1/288 (0%)
 Frame = +2

Query: 89  MVRLTADLIWKSPHFFNAVSDRELDLRGNKISVLENLGATEDQFDTVDLSDNEIVKLENF 268
           MVRLTADLIWKSPHFFNA+ +RELDLRGNK++V+ENLGATEDQFDT+DLSDNEIVKLEN 
Sbjct: 1   MVRLTADLIWKSPHFFNAIRERELDLRGNKVAVIENLGATEDQFDTIDLSDNEIVKLENL 60

Query: 269 PFLARLGXXXXXXXXXXXXXXXXGDYLPKXXXXXXXXXXXXXXXEIDPLASLTKLRFLTL 448
           P+L RLG                G+YLPK               EIDPL+S  KL+FL+L
Sbjct: 61  PYLNRLGTLLINNNRITRINPNIGEYLPKLHTLVLTNNRLVNLAEIDPLSSFPKLQFLSL 120

Query: 449 LDNNITKKPNYRLYVIFKLKSLRVLDFNKVKHKERIEAENLFASKEAEEEVRREPAKTFT 628
           LDNNITKKPNYRLYVI +LKSLR+LDF KVK+KER+EAENLFASKE EEE ++EP KTFT
Sbjct: 121 LDNNITKKPNYRLYVIHRLKSLRLLDFKKVKNKERLEAENLFASKEVEEEAKQEPLKTFT 180

Query: 629 PGELQNVPESPKEDQTPTVTAPTPEQIIAIKAAIVNSQTLEEVARLEKALKSGQLPADLK 808
           PGE+ N  E  +E Q P V  P+PE++IAIKAAIVNSQTLEEVARLEKALKSGQLPADLK
Sbjct: 181 PGEMPNALEPAEEQQIPKVVGPSPEELIAIKAAIVNSQTLEEVARLEKALKSGQLPADLK 240

Query: 809 -IPGDEKATDVRSQDDKMEVDAKNGATEQLDDAEHQQKNDGLATMEQD 949
            +  + +A  V  +DDKM     N + ++    E +QKND +A MEQ+
Sbjct: 241 SLVENTRADVVNEKDDKMVSSNPNTSRDEPKTVE-EQKNDDVAPMEQE 287


>gb|ADG27843.1| U2 small nuclear ribonucleoprotein A [Gossypium hirsutum]
          Length = 285

 Score =  343 bits (879), Expect = 7e-92
 Identities = 181/287 (63%), Positives = 215/287 (74%)
 Frame = +2

Query: 89  MVRLTADLIWKSPHFFNAVSDRELDLRGNKISVLENLGATEDQFDTVDLSDNEIVKLENF 268
           MV+LTADLIWK PHFFNA+ +RELDLRGNKI+V+ENLGATEDQFDT+DLSDNEIVKL+NF
Sbjct: 1   MVKLTADLIWKCPHFFNALKERELDLRGNKIAVIENLGATEDQFDTIDLSDNEIVKLDNF 60

Query: 269 PFLARLGXXXXXXXXXXXXXXXXGDYLPKXXXXXXXXXXXXXXXEIDPLASLTKLRFLTL 448
           P+L RLG                G++LP                EIDPL+SL KL+FL+L
Sbjct: 61  PYLKRLGTLLINNNRVTRINPNIGEFLPNLHTLVLTNNRLVNLVEIDPLSSLPKLQFLSL 120

Query: 449 LDNNITKKPNYRLYVIFKLKSLRVLDFNKVKHKERIEAENLFASKEAEEEVRREPAKTFT 628
           LDNNITKKPNYRLYVI KLKSLRVLDF KVK KER+EAENLFASKEAEEE+++E  KT  
Sbjct: 121 LDNNITKKPNYRLYVIHKLKSLRVLDFKKVKAKERLEAENLFASKEAEEEIKKESTKTVA 180

Query: 629 PGELQNVPESPKEDQTPTVTAPTPEQIIAIKAAIVNSQTLEEVARLEKALKSGQLPADLK 808
           P E+ NV E  +E+Q P V APTPEQI+AIKAAIVNSQTLEEVARLEKAL++GQLPADLK
Sbjct: 181 PKEVPNVSEVAEEEQMPKVVAPTPEQILAIKAAIVNSQTLEEVARLEKALQTGQLPADLK 240

Query: 809 IPGDEKATDVRSQDDKMEVDAKNGATEQLDDAEHQQKNDGLATMEQD 949
           IPGD+     +  D+K   D +N +  + D+ + + KN+  A MEQ+
Sbjct: 241 IPGDD-TNAAKGGDEKKVSDIQNESNVEPDNMD-EDKNEEPAPMEQE 285