BLASTX nr result

ID: Coptis21_contig00004165 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00004165
         (769 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003549728.1| PREDICTED: actin-related protein 2/3 complex...   317   1e-84
emb|CBI25551.3| unnamed protein product [Vitis vinifera]              316   3e-84
ref|XP_002264212.1| PREDICTED: actin-related protein 2/3 complex...   316   3e-84
ref|XP_003542654.1| PREDICTED: actin-related protein 2/3 complex...   314   1e-83
ref|XP_004166260.1| PREDICTED: actin-related protein 2/3 complex...   313   3e-83

>ref|XP_003549728.1| PREDICTED: actin-related protein 2/3 complex subunit 3-like
           [Glycine max]
          Length = 174

 Score =  317 bits (813), Expect = 1e-84
 Identities = 152/174 (87%), Positives = 162/174 (93%)
 Frame = -2

Query: 681 MVYHSSFTNEDDYTKACGCPLLPLKTHIKGPAPLTDEDNTDIVDEAITFFRANVFFRNFD 502
           MVYHSSF NED  ++ACGCPLLPLK+HIKGPAP++D+D TDIVDEAITFFRANVFFRNFD
Sbjct: 1   MVYHSSFVNEDGVSRACGCPLLPLKSHIKGPAPVSDQDRTDIVDEAITFFRANVFFRNFD 60

Query: 501 VKSSADKLLIYLTFYINVALKRLEGCRTLAGGTKAIINLGLENVPVPGEAGFSFAGLFAI 322
           +KS ADKLLIYLTFYINVALKRLEGCRTLA GTKAIINLGLE VPVPGE+GF F GLF +
Sbjct: 61  IKSPADKLLIYLTFYINVALKRLEGCRTLAEGTKAIINLGLEKVPVPGESGFPFPGLFPL 120

Query: 321 PQSQEEAELFRNYLKQIREETSGRLLSVAYRPNGTPNKWWLAFAKRKFMNIIAP 160
           PQS +EAELFRNYLKQIREETSGRLLSVAYRPNGTPNKWWLAFAKRKFMNII P
Sbjct: 121 PQSHKEAELFRNYLKQIREETSGRLLSVAYRPNGTPNKWWLAFAKRKFMNIIIP 174


>emb|CBI25551.3| unnamed protein product [Vitis vinifera]
          Length = 193

 Score =  316 bits (810), Expect = 3e-84
 Identities = 152/174 (87%), Positives = 163/174 (93%)
 Frame = -2

Query: 681 MVYHSSFTNEDDYTKACGCPLLPLKTHIKGPAPLTDEDNTDIVDEAITFFRANVFFRNFD 502
           MV+HSSF +++  TKACGCPLLPLK+HIKGPAP++D+D TDIVDEAITFFRANVFFRNFD
Sbjct: 20  MVHHSSFVDDEGITKACGCPLLPLKSHIKGPAPVSDQDRTDIVDEAITFFRANVFFRNFD 79

Query: 501 VKSSADKLLIYLTFYINVALKRLEGCRTLAGGTKAIINLGLENVPVPGEAGFSFAGLFAI 322
           +KSSADKLLIYLTFYINVALKRLEGCRTLA GTKAIINLGLE VPVPGE+GF F GLFA+
Sbjct: 80  IKSSADKLLIYLTFYINVALKRLEGCRTLAEGTKAIINLGLEKVPVPGESGFPFPGLFAL 139

Query: 321 PQSQEEAELFRNYLKQIREETSGRLLSVAYRPNGTPNKWWLAFAKRKFMNIIAP 160
           P SQ EAELFRNYLKQIREETSGRLLSVAYRPNGTPNKWWLAFAKRKFMNII P
Sbjct: 140 PLSQPEAELFRNYLKQIREETSGRLLSVAYRPNGTPNKWWLAFAKRKFMNIIVP 193


>ref|XP_002264212.1| PREDICTED: actin-related protein 2/3 complex subunit 3-like [Vitis
           vinifera]
          Length = 174

 Score =  316 bits (810), Expect = 3e-84
 Identities = 152/174 (87%), Positives = 163/174 (93%)
 Frame = -2

Query: 681 MVYHSSFTNEDDYTKACGCPLLPLKTHIKGPAPLTDEDNTDIVDEAITFFRANVFFRNFD 502
           MV+HSSF +++  TKACGCPLLPLK+HIKGPAP++D+D TDIVDEAITFFRANVFFRNFD
Sbjct: 1   MVHHSSFVDDEGITKACGCPLLPLKSHIKGPAPVSDQDRTDIVDEAITFFRANVFFRNFD 60

Query: 501 VKSSADKLLIYLTFYINVALKRLEGCRTLAGGTKAIINLGLENVPVPGEAGFSFAGLFAI 322
           +KSSADKLLIYLTFYINVALKRLEGCRTLA GTKAIINLGLE VPVPGE+GF F GLFA+
Sbjct: 61  IKSSADKLLIYLTFYINVALKRLEGCRTLAEGTKAIINLGLEKVPVPGESGFPFPGLFAL 120

Query: 321 PQSQEEAELFRNYLKQIREETSGRLLSVAYRPNGTPNKWWLAFAKRKFMNIIAP 160
           P SQ EAELFRNYLKQIREETSGRLLSVAYRPNGTPNKWWLAFAKRKFMNII P
Sbjct: 121 PLSQPEAELFRNYLKQIREETSGRLLSVAYRPNGTPNKWWLAFAKRKFMNIIVP 174


>ref|XP_003542654.1| PREDICTED: actin-related protein 2/3 complex subunit 3-like isoform
           1 [Glycine max] gi|356548532|ref|XP_003542655.1|
           PREDICTED: actin-related protein 2/3 complex subunit
           3-like isoform 2 [Glycine max]
          Length = 174

 Score =  314 bits (805), Expect = 1e-83
 Identities = 151/174 (86%), Positives = 161/174 (92%)
 Frame = -2

Query: 681 MVYHSSFTNEDDYTKACGCPLLPLKTHIKGPAPLTDEDNTDIVDEAITFFRANVFFRNFD 502
           MVYHSSF NED  ++ACGC LLPLK+HIKGPAP++D+D TDIVDEAITFFRANVFFRNFD
Sbjct: 1   MVYHSSFVNEDGVSRACGCSLLPLKSHIKGPAPVSDQDRTDIVDEAITFFRANVFFRNFD 60

Query: 501 VKSSADKLLIYLTFYINVALKRLEGCRTLAGGTKAIINLGLENVPVPGEAGFSFAGLFAI 322
           +KS ADKLLIYLTFYINVALKRLEGCRTLA GTKAIINLGLE VPVPGE+GF F GLF +
Sbjct: 61  IKSPADKLLIYLTFYINVALKRLEGCRTLAEGTKAIINLGLEKVPVPGESGFPFPGLFPL 120

Query: 321 PQSQEEAELFRNYLKQIREETSGRLLSVAYRPNGTPNKWWLAFAKRKFMNIIAP 160
           PQS +EAELFRNYLKQIREETSGRLLSVAYRPNGTPNKWWLAFAKRKFMNII P
Sbjct: 121 PQSHKEAELFRNYLKQIREETSGRLLSVAYRPNGTPNKWWLAFAKRKFMNIIIP 174


>ref|XP_004166260.1| PREDICTED: actin-related protein 2/3 complex subunit 3-like
           [Cucumis sativus]
          Length = 223

 Score =  313 bits (802), Expect = 3e-83
 Identities = 151/173 (87%), Positives = 162/173 (93%)
 Frame = -2

Query: 678 VYHSSFTNEDDYTKACGCPLLPLKTHIKGPAPLTDEDNTDIVDEAITFFRANVFFRNFDV 499
           V+HSSF +E+  +KACGCPLLPLK+HIKGPAP++D+D TDIVDEAITFFRANVFFRNFD+
Sbjct: 51  VHHSSFVDEEGISKACGCPLLPLKSHIKGPAPVSDQDKTDIVDEAITFFRANVFFRNFDI 110

Query: 498 KSSADKLLIYLTFYINVALKRLEGCRTLAGGTKAIINLGLENVPVPGEAGFSFAGLFAIP 319
           KS+ADKLLIYLTFYINVALKRLEGCRTLA GTKAIINLGLENVPVPGE+GF F GLF IP
Sbjct: 111 KSAADKLLIYLTFYINVALKRLEGCRTLAVGTKAIINLGLENVPVPGESGFPFPGLFPIP 170

Query: 318 QSQEEAELFRNYLKQIREETSGRLLSVAYRPNGTPNKWWLAFAKRKFMNIIAP 160
           QS EEAELFRNYLKQIREETSGRLLSVAYR NGTPNKWWLAFAKRKFMNII P
Sbjct: 171 QSNEEAELFRNYLKQIREETSGRLLSVAYRTNGTPNKWWLAFAKRKFMNIIIP 223


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