BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00004152
         (1269 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004165738.1| PREDICTED: 40S ribosomal protein SA-like [Cu...   417   e-114
ref|XP_004144441.1| PREDICTED: 40S ribosomal protein SA-like [Cu...   417   e-114
ref|NP_001149295.1| 40S ribosomal protein SA [Zea mays] gi|19470...   407   e-111
gb|AFW89454.1| 40S ribosomal protein SA [Zea mays]                    406   e-111
gb|ABK26340.1| unknown [Picea sitchensis] gi|224285162|gb|ACN403...   405   e-110

>ref|XP_004165738.1| PREDICTED: 40S ribosomal protein SA-like [Cucumis sativus]
          Length = 309

 Score =  417 bits (1072), Expect = e-114
 Identities = 212/282 (75%), Positives = 230/282 (81%), Gaps = 8/282 (2%)
 Frame = -1

Query: 1095 QKREDMQMMLAASVHLGTKNCDYQMERYVFKRRSDGIFIINLGKTWDKLHLAARVIVGIE 916
            QK  D+QMMLAA VHLGTKNCD+QMERYVFKRR+DGI+IINLGKTW+KL LAARVIVGIE
Sbjct: 12   QKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIVGIE 71

Query: 915  NPQDIIVQSARIYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQASFSEPRLLILTDPRT 736
            NPQDIIVQSAR YGQRAVLKFAQ+TGAHAIAGRHTPGTFTNQLQ SF+EPRLLILTDPRT
Sbjct: 72   NPQDIIVQSARPYGQRAVLKFAQHTGAHAIAGRHTPGTFTNQLQTSFNEPRLLILTDPRT 131

Query: 735  DHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKQSIGCLFWLLARMVQQMRGTV 556
            DHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGK SIGCLFWLLARMV QMRGT+
Sbjct: 132  DHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTI 191

Query: 555  LPGKRWDVMVDLFFYREPEEAKDQEGDEIPAIPDYAAPGFQGADTQWSNQGVDTQWTADV 376
              G +WDVMVDLFFYREPEEAK++E +E  A PDY    + GA    S+     QW   +
Sbjct: 192  RAGHQWDVMVDLFFYREPEEAKEKEEEEAVAPPDYGIADYGGAPLVASD-----QWAGQI 246

Query: 375  GDAQWN-PDLIPGQTVTPAV------VEYTQTAVLPVA-DEW 274
             DAQW  PDLIP     P V      VE+TQ  V+ +A D W
Sbjct: 247  SDAQWGAPDLIPAPDAAPVVVPPVSNVEWTQEPVVAIASDGW 288


>ref|XP_004144441.1| PREDICTED: 40S ribosomal protein SA-like [Cucumis sativus]
          Length = 309

 Score =  417 bits (1072), Expect = e-114
 Identities = 212/282 (75%), Positives = 230/282 (81%), Gaps = 8/282 (2%)
 Frame = -1

Query: 1095 QKREDMQMMLAASVHLGTKNCDYQMERYVFKRRSDGIFIINLGKTWDKLHLAARVIVGIE 916
            QK  D+QMMLAA VHLGTKNCD+QMERYVFKRR+DGI+IINLGKTW+KL LAARVIVGIE
Sbjct: 12   QKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIVGIE 71

Query: 915  NPQDIIVQSARIYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQASFSEPRLLILTDPRT 736
            NPQDIIVQSAR YGQRAVLKFAQ+TGAHAIAGRHTPGTFTNQLQ SF+EPRLLILTDPRT
Sbjct: 72   NPQDIIVQSARPYGQRAVLKFAQHTGAHAIAGRHTPGTFTNQLQTSFNEPRLLILTDPRT 131

Query: 735  DHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKQSIGCLFWLLARMVQQMRGTV 556
            DHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGK SIGCLFWLLARMV QMRGT+
Sbjct: 132  DHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTI 191

Query: 555  LPGKRWDVMVDLFFYREPEEAKDQEGDEIPAIPDYAAPGFQGADTQWSNQGVDTQWTADV 376
              G +WDVMVDLFFYREPEEAK++E +E  A PDY    + GA    S+     QW   +
Sbjct: 192  RAGHQWDVMVDLFFYREPEEAKEKEEEEAVAPPDYGIADYGGAPLVASD-----QWAGQI 246

Query: 375  GDAQWN-PDLIPGQTVTPAV------VEYTQTAVLPVA-DEW 274
             DAQW  PDLIP     P V      VE+TQ  V+ +A D W
Sbjct: 247  SDAQWGAPDLIPAPDAAPVVVPPVSNVEWTQEPVVAIASDGW 288


>ref|NP_001149295.1| 40S ribosomal protein SA [Zea mays] gi|194708106|gb|ACF88137.1|
            unknown [Zea mays] gi|195626134|gb|ACG34897.1| 40S
            ribosomal protein SA [Zea mays]
          Length = 308

 Score =  407 bits (1045), Expect = e-111
 Identities = 214/299 (71%), Positives = 235/299 (78%), Gaps = 25/299 (8%)
 Frame = -1

Query: 1095 QKREDMQMMLAASVHLGTKNCDYQMERYVFKRRSDGIFIINLGKTWDKLHLAARVIVGIE 916
            QK +D+QMMLAA VHLGTKNCD+QMERYVFKRR+DGI+IINLGKTWDKL LAARVIV IE
Sbjct: 15   QKEQDIQMMLAADVHLGTKNCDFQMERYVFKRRTDGIYIINLGKTWDKLQLAARVIVAIE 74

Query: 915  NPQDIIVQSARIYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQASFSEPRLLILTDPRT 736
            NPQDIIVQSAR YGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQ SFSEPRLLILTDPRT
Sbjct: 75   NPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFSEPRLLILTDPRT 134

Query: 735  DHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKQSIGCLFWLLARMVQQMRGTV 556
            DHQPIKE+ALGNIPTIAFCDTDSPMRYVDIGIPANNKG+ SIGCLFWLLARMV QMRGT+
Sbjct: 135  DHQPIKESALGNIPTIAFCDTDSPMRYVDIGIPANNKGRNSIGCLFWLLARMVLQMRGTI 194

Query: 555  LPGKRWDVMVDLFFYREPEEAKDQEGDEIPAIPDYAA-PGFQGADTQWSNQGVDTQWTAD 379
            LPG +W+VMVDLFFYR+PEEAK+QE +E  A P++AA   +QGAD QW       QWT+D
Sbjct: 195  LPGHKWEVMVDLFFYRDPEEAKEQE-EEAAAAPEFAAVTDYQGAD-QWGGD----QWTSD 248

Query: 378  VG-------DAQWN--PDLIP-----GQTVTPAVVEYT----------QTAVLPVADEW 274
            V         A W   P  +P      QTV P  V+ T          ++A  P A  W
Sbjct: 249  VAAPPVAPTGADWGAAPASVPTGDGWDQTVAPVPVDGTVPPVVAPTGWESAAQPTAQGW 307


>gb|AFW89454.1| 40S ribosomal protein SA [Zea mays]
          Length = 308

 Score =  406 bits (1044), Expect = e-111
 Identities = 214/299 (71%), Positives = 235/299 (78%), Gaps = 25/299 (8%)
 Frame = -1

Query: 1095 QKREDMQMMLAASVHLGTKNCDYQMERYVFKRRSDGIFIINLGKTWDKLHLAARVIVGIE 916
            QK +D+QMMLAA VHLGTKNCD+QMERYVFKRR+DGI+IINLGKTWDKL LAARVIV IE
Sbjct: 15   QKEQDIQMMLAADVHLGTKNCDFQMERYVFKRRTDGIYIINLGKTWDKLQLAARVIVAIE 74

Query: 915  NPQDIIVQSARIYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQASFSEPRLLILTDPRT 736
            NPQDIIVQSAR YGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQ SFSEPRLLILTDPRT
Sbjct: 75   NPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFSEPRLLILTDPRT 134

Query: 735  DHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKQSIGCLFWLLARMVQQMRGTV 556
            DHQPIKE+ALGNIPTIAFCDTDSPMRYVDIGIPANNKG+ SIGCLFWLLARMV QMRGT+
Sbjct: 135  DHQPIKESALGNIPTIAFCDTDSPMRYVDIGIPANNKGRNSIGCLFWLLARMVLQMRGTI 194

Query: 555  LPGKRWDVMVDLFFYREPEEAKDQEGDEIPAIPDYAA-PGFQGADTQWSNQGVDTQWTAD 379
            LPG +W+VMVDLFFYR+PEEAK+QE +E  A P++AA   +QGAD QW       QWT+D
Sbjct: 195  LPGHKWEVMVDLFFYRDPEEAKEQE-EEAAAAPEFAAVTDYQGAD-QWGGD----QWTSD 248

Query: 378  VG-------DAQWN--PDLIP-----GQTVTPAVVEYT----------QTAVLPVADEW 274
            V         A W   P  +P      QTV P  V+ T          ++A  P A  W
Sbjct: 249  VAAPPVAPTGADWGAAPAPVPTGDGWDQTVAPVPVDGTVPPVVAPTGWESAAQPTAQGW 307


>gb|ABK26340.1| unknown [Picea sitchensis] gi|224285162|gb|ACN40308.1| unknown [Picea
            sitchensis]
          Length = 319

 Score =  405 bits (1040), Expect = e-110
 Identities = 213/319 (66%), Positives = 231/319 (72%), Gaps = 18/319 (5%)
 Frame = -1

Query: 1116 RKMAWEIQKREDMQMMLAASVHLGTKNCDYQMERYVFKRRSDGIFIINLGKTWDKLHLAA 937
            +KM    QK  D+QMMLAA VHLGTKNCD+QMERYV+KRRSDGIFIINLGKTW+KL LAA
Sbjct: 3    QKMGGLSQKEADIQMMLAADVHLGTKNCDFQMERYVYKRRSDGIFIINLGKTWEKLQLAA 62

Query: 936  RVIVGIENPQDIIVQSARIYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQASFSEPRLL 757
            RVIV IENPQDIIVQSAR YGQRAVLKFAQYTGAHAIAGRHTPGTFTNQ+Q SF+EPRLL
Sbjct: 63   RVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQMQTSFNEPRLL 122

Query: 756  ILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKQSIGCLFWLLARMV 577
            ILTDPRTDHQPI+EAALGNIPTIAFCDTDSPM++VDIGIPANNKGK SIGCLFW+LARMV
Sbjct: 123  ILTDPRTDHQPIREAALGNIPTIAFCDTDSPMKHVDIGIPANNKGKHSIGCLFWMLARMV 182

Query: 576  QQMRGTVLPGKRWDVMVDLFFYREPEEAKDQEGDEIPA---IPDYAAPGFQGADTQWSNQ 406
             QMRGT+LPG +WD+MVDLFFYREPEEAK+ E +E P      DY AP       QW   
Sbjct: 183  LQMRGTILPGHKWDIMVDLFFYREPEEAKEHEDEEAPVAEYTADYTAPALALPGDQWG-- 240

Query: 405  GVDTQWTADVGDAQW---NPDLIPG----------QTVTPAVVE--YTQTAVLPVADEWX 271
                   AD+ DAQW    P  IP            T  P   E   T  A LP A EW 
Sbjct: 241  -------ADIPDAQWGAPEPSAIPAVPALAASDWPGTAVPIAAEGWDTAPAPLPPAAEW- 292

Query: 270  XXXXXXXXXATSLPPPSWD 214
                       + P P WD
Sbjct: 293  --NAASMPSIPAAPVPGWD 309