BLASTX nr result

ID: Coptis21_contig00004139 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00004139
         (1081 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276437.1| PREDICTED: uncharacterized protein LOC100266...   347   2e-93
ref|XP_002532474.1| conserved hypothetical protein [Ricinus comm...   301   1e-79
ref|XP_003629096.1| hypothetical protein MTR_8g073110 [Medicago ...   300   3e-79
gb|AFK35626.1| unknown [Medicago truncatula]                          299   7e-79
dbj|BAF98215.1| CM0216.310.nc [Lotus japonicus]                       296   8e-78

>ref|XP_002276437.1| PREDICTED: uncharacterized protein LOC100266179 [Vitis vinifera]
            gi|296082571|emb|CBI21576.3| unnamed protein product
            [Vitis vinifera]
          Length = 403

 Score =  347 bits (891), Expect = 2e-93
 Identities = 181/296 (61%), Positives = 220/296 (74%), Gaps = 4/296 (1%)
 Frame = -1

Query: 1081 TDIQKFEILLCIGNKVDLLPGHPAHAEYRRLLQRRGESSSDPHPEFFDYGISESEGCSLL 902
            TDIQ F+ILLC+GNKVDL+PGH AH EYRR LQR G+ S++P+ EF +YGISE+EG SLL
Sbjct: 107  TDIQNFDILLCVGNKVDLVPGHSAHVEYRRRLQRLGDLSAEPYLEFSEYGISETEGSSLL 166

Query: 901  GDEEPSWDLRRSCLEWSIQHNIEYIEACASNADFDKCLSVDGDSQGVERLYGALSAHMWP 722
            GDEE  W++ RSCLEW  + NIEYIEACASNADFDKCLSV+GDSQGV+R+ GALSAHMWP
Sbjct: 167  GDEESPWEISRSCLEWCSERNIEYIEACASNADFDKCLSVNGDSQGVDRILGALSAHMWP 226

Query: 721  GMVLKSGNTIVEPYRMKXXXXXXXXXXXXXXXEILSAGSAEQFDDT-EVWVSANGPTTST 545
            GM LKSG+ I+EP   +               EILSAGSAE +DDT EVWVSA+GPT ST
Sbjct: 227  GMTLKSGDKIMEPSLPENQELSEEESDYEIEYEILSAGSAEPWDDTDEVWVSASGPTAST 286

Query: 544  STKEPVTKNV---TSNDEPEKEGNASNVQPSNANAQVLEKSDVELDAKDHELDNITQLDE 374
            ST   +T+NV     + E +  G+A  +Q S + A   E+ + E+  K +E D   ++DE
Sbjct: 287  STSRSLTQNVEIEEHDQEKKNRGDARELQVSTSTAPSQEEINGEMVPKVNETDEAVEVDE 346

Query: 373  DTHIGFENLEQLMNEIGNVRGSLRLMPDFQRREAAAQLAMKMASMFGDSSADEEGF 206
              H+ +E+LEQLM+EIGN+R SLRLMPDFQRRE AA LAMKMA+MFGD S DEEGF
Sbjct: 347  GKHLKYEDLEQLMSEIGNMRDSLRLMPDFQRREMAANLAMKMATMFGDGS-DEEGF 401


>ref|XP_002532474.1| conserved hypothetical protein [Ricinus communis]
            gi|223527799|gb|EEF29898.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 400

 Score =  301 bits (772), Expect = 1e-79
 Identities = 163/293 (55%), Positives = 203/293 (69%), Gaps = 3/293 (1%)
 Frame = -1

Query: 1078 DIQKFEILLCIGNKVDLLPGHPAHAEYRRLLQRRGESSSDPHPEFFDYGISESEGCSLLG 899
            DI KFEILLCIGNKVDL+PGHP HAEYRR L +  ESSSD + EF  +GI E+EG SLLG
Sbjct: 108  DIHKFEILLCIGNKVDLIPGHPVHAEYRRRLLKLEESSSDTYTEFSGFGILETEGSSLLG 167

Query: 898  DEEPSWDLRRSCLEWSIQHNIEYIEACASNADFDKCLSVDGDSQGVERLYGALSAHMWPG 719
             EEP+W+++RSC EW  +H+IEYIEACASNADFDKCLS DGDSQGVERL  ALSAHMWPG
Sbjct: 168  GEEPAWEIKRSCTEWCSEHSIEYIEACASNADFDKCLSADGDSQGVERLLVALSAHMWPG 227

Query: 718  MVLKSGNTIVEPYRMKXXXXXXXXXXXXXXXEILSAGSAEQFDDTE-VWVSANGPTTSTS 542
            MVLKSG++I +P  +                E+LSAGSAE +DDT   WVSANG +    
Sbjct: 228  MVLKSGSSITQPTLLYKEDLSEEESDYEFEYEVLSAGSAELWDDTHGGWVSANGTSAVPD 287

Query: 541  TKEPVTKNVTSNDEPEK--EGNASNVQPSNANAQVLEKSDVELDAKDHELDNITQLDEDT 368
                  +N  + D   +  E     +QPS +  ++ +  +V  + +D      T+++E +
Sbjct: 288  LGGSAEQNNHNRDHDHEVWEKFDEELQPSTSAVELEDDKEVATNIEDPSKG--TEINEVS 345

Query: 367  HIGFENLEQLMNEIGNVRGSLRLMPDFQRREAAAQLAMKMASMFGDSSADEEG 209
               FE+L+QLM+EIGN+R +LR MPDFQRRE AA+LAMKMASMFG +S DEEG
Sbjct: 346  PFEFEDLDQLMSEIGNIRDNLRFMPDFQRREMAAKLAMKMASMFGGAS-DEEG 397


>ref|XP_003629096.1| hypothetical protein MTR_8g073110 [Medicago truncatula]
            gi|355523118|gb|AET03572.1| hypothetical protein
            MTR_8g073110 [Medicago truncatula]
          Length = 405

 Score =  300 bits (769), Expect = 3e-79
 Identities = 157/296 (53%), Positives = 203/296 (68%), Gaps = 6/296 (2%)
 Frame = -1

Query: 1081 TDIQKFEILLCIGNKVDLLPGHPAHAEYRRLLQRRGESSSDPHPEFFDYGISESEGCSLL 902
            TDIQ FEILLCIGNKVDL+P HP HAEYRR L +  +S+ D + EF +YGISE+EG SLL
Sbjct: 115  TDIQNFEILLCIGNKVDLVPDHPVHAEYRRRLLKHEDSAVDLYSEFSEYGISETEGTSLL 174

Query: 901  GDEEPSWDLRRSCLEWSIQHNIEYIEACASNADFDKCLSVDGDSQGVERLYGALSAHMWP 722
            G EEPSWD+R+SCLEW  +HNIE++EACASNADFDKCLSVDGD QGVER+YGALSAHMWP
Sbjct: 175  GSEEPSWDIRKSCLEWCAEHNIEFVEACASNADFDKCLSVDGDLQGVERIYGALSAHMWP 234

Query: 721  GMVLKSGNTIVEPYRMKXXXXXXXXXXXXXXXEILSAGSAEQFDDTEV-WVS-----ANG 560
            GMVLKSG  I +P   +               E+LS G+A+ +D+TE  W+S     A G
Sbjct: 235  GMVLKSGERINQPSFPEIEEMSSEESDYEQEYEVLSDGTADAWDETEQGWISATPLDAGG 294

Query: 559  PTTSTSTKEPVTKNVTSNDEPEKEGNASNVQPSNANAQVLEKSDVELDAKDHELDNITQL 380
            P+ S +  +      TS +  +   +   ++P+N+     ++ ++ +     + +   +L
Sbjct: 295  PSVSQNNTD------TSCEHDDANKSDKELRPTNSRTAFQDEGNMAVTHNIVDSEGDGKL 348

Query: 379  DEDTHIGFENLEQLMNEIGNVRGSLRLMPDFQRREAAAQLAMKMASMFGDSSADEE 212
            D++  +  ENLEQLM+EIGN+R  LRLMPDFQRRE AA+LAMKMAS+FG  S D E
Sbjct: 349  DDNECLDLENLEQLMSEIGNMRSGLRLMPDFQRREMAAKLAMKMASLFGGESDDGE 404


>gb|AFK35626.1| unknown [Medicago truncatula]
          Length = 405

 Score =  299 bits (766), Expect = 7e-79
 Identities = 156/296 (52%), Positives = 202/296 (68%), Gaps = 6/296 (2%)
 Frame = -1

Query: 1081 TDIQKFEILLCIGNKVDLLPGHPAHAEYRRLLQRRGESSSDPHPEFFDYGISESEGCSLL 902
            TDIQ FEILLCIGNKVDL+P HP HAEYRR L +  +S+ D + EF +YGISE+EG SLL
Sbjct: 115  TDIQNFEILLCIGNKVDLVPDHPVHAEYRRRLLKHEDSAVDLYSEFSEYGISETEGASLL 174

Query: 901  GDEEPSWDLRRSCLEWSIQHNIEYIEACASNADFDKCLSVDGDSQGVERLYGALSAHMWP 722
            G EEPSWD+R+SCLEW  +HNIE++EACASNADFDKCLSVDGD QGVER+YGALSAHMWP
Sbjct: 175  GSEEPSWDIRKSCLEWCAEHNIEFVEACASNADFDKCLSVDGDLQGVERIYGALSAHMWP 234

Query: 721  GMVLKSGNTIVEPYRMKXXXXXXXXXXXXXXXEILSAGSAEQFDDTEV-WVS-----ANG 560
            GMVLKSG  I +P   +               E+LS G+A+ +D+TE  W+S     A G
Sbjct: 235  GMVLKSGERINQPSFPEIEEMSSEESDYEQEYEVLSDGTADAWDETEQGWISATPLDAGG 294

Query: 559  PTTSTSTKEPVTKNVTSNDEPEKEGNASNVQPSNANAQVLEKSDVELDAKDHELDNITQL 380
            P+ S +  +      TS +  +   +   ++P+N+     ++ ++ +     + +   +L
Sbjct: 295  PSVSQNNTD------TSCEHDDANKSDKELRPTNSRTAFQDEGNMAVTHNIVDSEGDGKL 348

Query: 379  DEDTHIGFENLEQLMNEIGNVRGSLRLMPDFQRREAAAQLAMKMASMFGDSSADEE 212
            D++  +  ENLEQLM+EIGN+R  LRLMPDFQRRE AA+L MKMAS+FG  S D E
Sbjct: 349  DDNECLDLENLEQLMSEIGNMRSGLRLMPDFQRREMAAKLTMKMASLFGGESDDGE 404


>dbj|BAF98215.1| CM0216.310.nc [Lotus japonicus]
          Length = 401

 Score =  296 bits (757), Expect = 8e-78
 Identities = 160/290 (55%), Positives = 199/290 (68%), Gaps = 1/290 (0%)
 Frame = -1

Query: 1081 TDIQKFEILLCIGNKVDLLPGHPAHAEYRRLLQRRGESSSDPHPEFFDYGISESEGCSLL 902
            TDIQ FEILLCIGNKVDL+PGHPAHAEYRR L +  +SS++   EF +YGISESEG SLL
Sbjct: 114  TDIQNFEILLCIGNKVDLVPGHPAHAEYRRRLLKLEDSSANLDLEFSEYGISESEGTSLL 173

Query: 901  GDEEPSWDLRRSCLEWSIQHNIEYIEACASNADFDKCLSVDGDSQGVERLYGALSAHMWP 722
            GDEEPSWD+R+SCLEW  ++NIE++EACASNADFDKCLSVDGD QGVERLYGALSAHMWP
Sbjct: 174  GDEEPSWDIRKSCLEWCTENNIEFVEACASNADFDKCLSVDGDLQGVERLYGALSAHMWP 233

Query: 721  GMVLKSGNTIVEPYRMKXXXXXXXXXXXXXXXEILSAGSAEQFDDTE-VWVSANGPTTST 545
            GM+LKSG+ I +P   +               E+LSAGSA+ + DTE  WV A   T+S 
Sbjct: 234  GMILKSGDRISQPSFPEKEDLSSEESDYDQEYEVLSAGSADPWHDTEQEWVCA---TSSD 290

Query: 544  STKEPVTKNVTSNDEPEKEGNASNVQPSNANAQVLEKSDVELDAKDHELDNITQLDEDTH 365
            +       N  +  E   E  +     +  +    +++D E+     + +   + D+   
Sbjct: 291  AGGSAPQDNSNTGREHVDESKSKKELHTTTSCTDQDENDKEVVHNIVDSEGDVKEDDGEC 350

Query: 364  IGFENLEQLMNEIGNVRGSLRLMPDFQRREAAAQLAMKMASMFGDSSADE 215
            +  E+LEQLM+EIGN+R  LRLMPDFQRRE AA+LAMKMASMFG  S +E
Sbjct: 351  LELEDLEQLMSEIGNMRDGLRLMPDFQRREMAAKLAMKMASMFGGESDEE 400


Top