BLASTX nr result

ID: Coptis21_contig00004130 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00004130
         (939 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003632667.1| PREDICTED: eukaryotic translation initiation...    71   4e-10
emb|CBI30501.3| unnamed protein product [Vitis vinifera]               71   4e-10
ref|XP_002272361.1| PREDICTED: eukaryotic translation initiation...    71   4e-10
emb|CAN73378.1| hypothetical protein VITISV_037535 [Vitis vinifera]    71   4e-10
emb|CBI16056.3| unnamed protein product [Vitis vinifera]               66   1e-08

>ref|XP_003632667.1| PREDICTED: eukaryotic translation initiation factor 3 subunit G
           isoform 2 [Vitis vinifera]
          Length = 286

 Score = 70.9 bits (172), Expect = 4e-10
 Identities = 54/150 (36%), Positives = 70/150 (46%), Gaps = 25/150 (16%)
 Frame = +1

Query: 364 LCPACGEKVDPHDNPNCIYGDVSPLP---------------------LYVPP----GATI 468
           +C  CG+K D H    C Y D++P P                      YVPP    GA  
Sbjct: 134 VCRTCGKKGD-HWTSRCPYKDLAPQPEAFIDKPTASDPTAAASVTKGAYVPPSMRAGADR 192

Query: 469 IERPQQRVLNTKENAIDNTIVLQNLPENYSDADLCQVCSAFGPLDDVEAVIDDETGLCLG 648
                 R  N      +N + + NL E+  +ADL ++ S FG L  V   ID +TGL  G
Sbjct: 193 SSGTDMRRRNE-----ENAVRVSNLSEDTHEADLRELFSRFGQLTRVYVAIDHKTGLSRG 247

Query: 649 NGYVRFENIDDAEKAIEGLNIKYGYDAVWL 738
            GYV F N +DAE+AI  LN  YGYD++ L
Sbjct: 248 FGYVNFVNREDAERAISKLN-GYGYDSLIL 276


>emb|CBI30501.3| unnamed protein product [Vitis vinifera]
          Length = 194

 Score = 70.9 bits (172), Expect = 4e-10
 Identities = 54/150 (36%), Positives = 70/150 (46%), Gaps = 25/150 (16%)
 Frame = +1

Query: 364 LCPACGEKVDPHDNPNCIYGDVSPLP---------------------LYVPP----GATI 468
           +C  CG+K D H    C Y D++P P                      YVPP    GA  
Sbjct: 42  VCRTCGKKGD-HWTSRCPYKDLAPQPEAFIDKPTASDPTAAASVTKGAYVPPSMRAGADR 100

Query: 469 IERPQQRVLNTKENAIDNTIVLQNLPENYSDADLCQVCSAFGPLDDVEAVIDDETGLCLG 648
                 R  N      +N + + NL E+  +ADL ++ S FG L  V   ID +TGL  G
Sbjct: 101 SSGTDMRRRNE-----ENAVRVSNLSEDTHEADLRELFSRFGQLTRVYVAIDHKTGLSRG 155

Query: 649 NGYVRFENIDDAEKAIEGLNIKYGYDAVWL 738
            GYV F N +DAE+AI  LN  YGYD++ L
Sbjct: 156 FGYVNFVNREDAERAISKLN-GYGYDSLIL 184


>ref|XP_002272361.1| PREDICTED: eukaryotic translation initiation factor 3 subunit G
           isoform 1 [Vitis vinifera]
          Length = 293

 Score = 70.9 bits (172), Expect = 4e-10
 Identities = 54/150 (36%), Positives = 70/150 (46%), Gaps = 25/150 (16%)
 Frame = +1

Query: 364 LCPACGEKVDPHDNPNCIYGDVSPLP---------------------LYVPP----GATI 468
           +C  CG+K D H    C Y D++P P                      YVPP    GA  
Sbjct: 141 VCRTCGKKGD-HWTSRCPYKDLAPQPEAFIDKPTASDPTAAASVTKGAYVPPSMRAGADR 199

Query: 469 IERPQQRVLNTKENAIDNTIVLQNLPENYSDADLCQVCSAFGPLDDVEAVIDDETGLCLG 648
                 R  N      +N + + NL E+  +ADL ++ S FG L  V   ID +TGL  G
Sbjct: 200 SSGTDMRRRNE-----ENAVRVSNLSEDTHEADLRELFSRFGQLTRVYVAIDHKTGLSRG 254

Query: 649 NGYVRFENIDDAEKAIEGLNIKYGYDAVWL 738
            GYV F N +DAE+AI  LN  YGYD++ L
Sbjct: 255 FGYVNFVNREDAERAISKLN-GYGYDSLIL 283


>emb|CAN73378.1| hypothetical protein VITISV_037535 [Vitis vinifera]
          Length = 306

 Score = 70.9 bits (172), Expect = 4e-10
 Identities = 54/150 (36%), Positives = 70/150 (46%), Gaps = 25/150 (16%)
 Frame = +1

Query: 364 LCPACGEKVDPHDNPNCIYGDVSPLP---------------------LYVPP----GATI 468
           +C  CG+K D H    C Y D++P P                      YVPP    GA  
Sbjct: 154 VCRTCGKKGD-HWTSRCPYKDLAPQPEAFIDKPTASDPTAAASVTKGAYVPPSMRAGADR 212

Query: 469 IERPQQRVLNTKENAIDNTIVLQNLPENYSDADLCQVCSAFGPLDDVEAVIDDETGLCLG 648
                 R  N      +N + + NL E+  +ADL ++ S FG L  V   ID +TGL  G
Sbjct: 213 SSGTDMRRRNE-----ENAVRVSNLSEDTHEADLRELFSRFGQLTRVYVAIDHKTGLSRG 267

Query: 649 NGYVRFENIDDAEKAIEGLNIKYGYDAVWL 738
            GYV F N +DAE+AI  LN  YGYD++ L
Sbjct: 268 FGYVNFVNREDAERAISKLN-GYGYDSLIL 296


>emb|CBI16056.3| unnamed protein product [Vitis vinifera]
          Length = 193

 Score = 66.2 bits (160), Expect = 1e-08
 Identities = 47/144 (32%), Positives = 67/144 (46%), Gaps = 23/144 (15%)
 Frame = +1

Query: 364 LCPACGEKVDPHDNPNCIYGDVSPLP----------------------LYVPPGATI-IE 474
           +C  CG+K D H    C Y D++P                         YVPPG     E
Sbjct: 41  VCRTCGKKGD-HWTSRCPYKDLAPPSEGFIDKPAASEGTATASGPSKGTYVPPGMRAGAE 99

Query: 475 RPQQRVLNTKENAIDNTIVLQNLPENYSDADLCQVCSAFGPLDDVEAVIDDETGLCLGNG 654
           R    +    E   +N++ + NL E+  + DL ++   FGP+  V   +D +TG+  G G
Sbjct: 100 RTGTEMRRRNE---ENSVRVTNLSEDTREPDLHELFRTFGPVSRVYVAVDQKTGMSRGFG 156

Query: 655 YVRFENIDDAEKAIEGLNIKYGYD 726
           +V F N +DAE+AI  LN  YGYD
Sbjct: 157 FVNFVNKEDAERAINKLN-GYGYD 179


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