BLASTX nr result

ID: Coptis21_contig00004121 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00004121
         (1328 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280297.1| PREDICTED: putative oxidoreductase GLYR1-lik...   524   e-146
emb|CBI35963.3| unnamed protein product [Vitis vinifera]              521   e-145
ref|NP_001233836.1| succinic semialdehyde reductase isofom2 [Sol...   513   e-143
ref|XP_004146816.1| PREDICTED: putative oxidoreductase GLYR1-lik...   506   e-141
ref|XP_002521394.1| 3-hydroxyisobutyrate dehydrogenase, putative...   505   e-141

>ref|XP_002280297.1| PREDICTED: putative oxidoreductase GLYR1-like [Vitis vinifera]
          Length = 365

 Score =  524 bits (1349), Expect = e-146
 Identities = 275/350 (78%), Positives = 300/350 (85%), Gaps = 3/350 (0%)
 Frame = +2

Query: 62   ILASSITPSPTMAMSSTFLPQIXXXXXXXXXXXXXIKPLFSTCSKAFSSQS---SKENES 232
            +L  S T S  MAM S+F P                 P      KAFSSQ+   S ++E 
Sbjct: 12   LLNPSNTASLAMAMCSSFCPPQVPNHFRGTTPIPSFLPK-PPSFKAFSSQTATASTKDEF 70

Query: 233  PAHIGFLGLGIMGTPMAQNLIKAGCDVTVWNRTKSKCDSLISLGAKYKSSPEEVASSCDV 412
            PA +GFLGLGIMG+PMAQNLIK+GCDVTVWNRTKSKCD LISLGAKYKSSPEEVA+SCDV
Sbjct: 71   PARVGFLGLGIMGSPMAQNLIKSGCDVTVWNRTKSKCDPLISLGAKYKSSPEEVAASCDV 130

Query: 413  TFAMLADPESAVDVACGEYGAANGLSPGKGYVDVSTVDGATSKLIDKQVKATGALFLEAP 592
            TFAMLADPESAVDVACG++GAA+G+ PGKGYVDVSTVDGATSKLI + +KATGALFLEAP
Sbjct: 131  TFAMLADPESAVDVACGKHGAASGIGPGKGYVDVSTVDGATSKLIGEHIKATGALFLEAP 190

Query: 593  VSGSKKPAEDGQLIFLTAGDEALYEMVAPFLDIMGKSRFYLGDVGNGAAMKLVVNMIMGS 772
            VSGSKKPAEDGQLIFLT GD++LYE VAP LDIMGKSRF+LG VGNGAAMKLVVNM+MGS
Sbjct: 191  VSGSKKPAEDGQLIFLTGGDKSLYETVAPLLDIMGKSRFFLGSVGNGAAMKLVVNMVMGS 250

Query: 773  MMASFSEGLLLSKKVGLDPSVLVEVVSQGAISAPMFSMKGPSMVQAVYPTAFPLKHQQKD 952
            MMASFSEGLLL +KVGLDP V+VEV+SQGAISAPMFSMKGPSMV++VYPTAFPLKHQQKD
Sbjct: 251  MMASFSEGLLLGEKVGLDPDVIVEVISQGAISAPMFSMKGPSMVKSVYPTAFPLKHQQKD 310

Query: 953  LRLALGLAESVSQPTPIAAAANELYKVAKSHGLSDQDFSAVIEALKPQFQ 1102
            LRLALGLAESVSQPTPIAAAANELYKVAKSHGLSD DFSAVIEALK + Q
Sbjct: 311  LRLALGLAESVSQPTPIAAAANELYKVAKSHGLSDHDFSAVIEALKVKMQ 360


>emb|CBI35963.3| unnamed protein product [Vitis vinifera]
          Length = 343

 Score =  521 bits (1341), Expect = e-145
 Identities = 264/306 (86%), Positives = 287/306 (93%), Gaps = 3/306 (0%)
 Frame = +2

Query: 194  KAFSSQS---SKENESPAHIGFLGLGIMGTPMAQNLIKAGCDVTVWNRTKSKCDSLISLG 364
            KAFSSQ+   S ++E PA +GFLGLGIMG+PMAQNLIK+GCDVTVWNRTKSKCD LISLG
Sbjct: 33   KAFSSQTATASTKDEFPARVGFLGLGIMGSPMAQNLIKSGCDVTVWNRTKSKCDPLISLG 92

Query: 365  AKYKSSPEEVASSCDVTFAMLADPESAVDVACGEYGAANGLSPGKGYVDVSTVDGATSKL 544
            AKYKSSPEEVA+SCDVTFAMLADPESAVDVACG++GAA+G+ PGKGYVDVSTVDGATSKL
Sbjct: 93   AKYKSSPEEVAASCDVTFAMLADPESAVDVACGKHGAASGIGPGKGYVDVSTVDGATSKL 152

Query: 545  IDKQVKATGALFLEAPVSGSKKPAEDGQLIFLTAGDEALYEMVAPFLDIMGKSRFYLGDV 724
            I + +KATGALFLEAPVSGSKKPAEDGQLIFLT GD++LYE VAP LDIMGKSRF+LG V
Sbjct: 153  IGEHIKATGALFLEAPVSGSKKPAEDGQLIFLTGGDKSLYETVAPLLDIMGKSRFFLGSV 212

Query: 725  GNGAAMKLVVNMIMGSMMASFSEGLLLSKKVGLDPSVLVEVVSQGAISAPMFSMKGPSMV 904
            GNGAAMKLVVNM+MGSMMASFSEGLLL +KVGLDP V+VEV+SQGAISAPMFSMKGPSMV
Sbjct: 213  GNGAAMKLVVNMVMGSMMASFSEGLLLGEKVGLDPDVIVEVISQGAISAPMFSMKGPSMV 272

Query: 905  QAVYPTAFPLKHQQKDLRLALGLAESVSQPTPIAAAANELYKVAKSHGLSDQDFSAVIEA 1084
            ++VYPTAFPLKHQQKDLRLALGLAESVSQPTPIAAAANELYKVAKSHGLSD DFSAVIEA
Sbjct: 273  KSVYPTAFPLKHQQKDLRLALGLAESVSQPTPIAAAANELYKVAKSHGLSDHDFSAVIEA 332

Query: 1085 LKPQFQ 1102
            LK + Q
Sbjct: 333  LKVKMQ 338


>ref|NP_001233836.1| succinic semialdehyde reductase isofom2 [Solanum lycopersicum]
            gi|171854591|dbj|BAG16486.1| succinic semialdehyde
            reductase isofom2 [Solanum lycopersicum]
          Length = 363

 Score =  513 bits (1322), Expect = e-143
 Identities = 266/338 (78%), Positives = 292/338 (86%), Gaps = 3/338 (0%)
 Frame = +2

Query: 95   MAMSSTFLPQIXXXXXXXXXXXXX-IKPLFSTCSKAFSSQSS--KENESPAHIGFLGLGI 265
            MAM STF P++              +K  F    KAFSSQ+S  K ++ PA IGFLGLGI
Sbjct: 1    MAMCSTFCPRLSFHLNCKKSLSLFPVKHRFFVTIKAFSSQTSAPKADDLPASIGFLGLGI 60

Query: 266  MGTPMAQNLIKAGCDVTVWNRTKSKCDSLISLGAKYKSSPEEVASSCDVTFAMLADPESA 445
            MG PMAQNLIKAGCDVTVWNRTKSKC+ LISLGAKYKSSPEEVA+SCDVTFAMLADPESA
Sbjct: 61   MGNPMAQNLIKAGCDVTVWNRTKSKCEPLISLGAKYKSSPEEVAASCDVTFAMLADPESA 120

Query: 446  VDVACGEYGAANGLSPGKGYVDVSTVDGATSKLIDKQVKATGALFLEAPVSGSKKPAEDG 625
             DVACG+YGAA G+ PGKGYVD STVDG TSKLI + ++ATGA FLEAPVSGSKKPAEDG
Sbjct: 121  ADVACGKYGAAKGMGPGKGYVDASTVDGETSKLICEHIRATGAHFLEAPVSGSKKPAEDG 180

Query: 626  QLIFLTAGDEALYEMVAPFLDIMGKSRFYLGDVGNGAAMKLVVNMIMGSMMASFSEGLLL 805
            QLIFLTAGD  LY+  AP LDIMGKSRFYLG+VGNGAAMKLVVNM+MGSMMASF+EGL+L
Sbjct: 181  QLIFLTAGDSVLYDKAAPLLDIMGKSRFYLGEVGNGAAMKLVVNMVMGSMMASFAEGLVL 240

Query: 806  SKKVGLDPSVLVEVVSQGAISAPMFSMKGPSMVQAVYPTAFPLKHQQKDLRLALGLAESV 985
            S+KVGLDPSVLVEV+SQGAISAPM+++KGPSMV++ YPTAFPLKHQQKDLRLALGLAESV
Sbjct: 241  SEKVGLDPSVLVEVISQGAISAPMYAVKGPSMVKSSYPTAFPLKHQQKDLRLALGLAESV 300

Query: 986  SQPTPIAAAANELYKVAKSHGLSDQDFSAVIEALKPQF 1099
            SQP PIAAA NELYKVAKSHGLSDQDFSAVIEALK +F
Sbjct: 301  SQPIPIAAATNELYKVAKSHGLSDQDFSAVIEALKVKF 338


>ref|XP_004146816.1| PREDICTED: putative oxidoreductase GLYR1-like [Cucumis sativus]
          Length = 356

 Score =  506 bits (1304), Expect = e-141
 Identities = 261/341 (76%), Positives = 293/341 (85%), Gaps = 2/341 (0%)
 Frame = +2

Query: 86   SPTMAMSSTFLPQIXXXXXXXXXXXXXIKPLFSTCSKAFSSQSSKEN--ESPAHIGFLGL 259
            S  +AMSS+F P +              KP FS   K FS Q++  +  +    +GFLGL
Sbjct: 15   STAIAMSSSFCPHLPLHFGTRPIFYFPTKPSFSLSFKPFSVQATNASSGKEELRVGFLGL 74

Query: 260  GIMGTPMAQNLIKAGCDVTVWNRTKSKCDSLISLGAKYKSSPEEVASSCDVTFAMLADPE 439
            GIMGTPMAQNLIK+GCDVTVWNRTKSKCD LI+LGAKY+SSP+EVA+SCDVTFAMLADP 
Sbjct: 75   GIMGTPMAQNLIKSGCDVTVWNRTKSKCDPLINLGAKYQSSPQEVAASCDVTFAMLADPN 134

Query: 440  SAVDVACGEYGAANGLSPGKGYVDVSTVDGATSKLIDKQVKATGALFLEAPVSGSKKPAE 619
            SA++VACGE GAA+G+SPGKGYVDVSTVD  TSKLI  ++K TGALFLEAPVSGSKKPAE
Sbjct: 135  SALEVACGENGAASGMSPGKGYVDVSTVDDTTSKLISARIKDTGALFLEAPVSGSKKPAE 194

Query: 620  DGQLIFLTAGDEALYEMVAPFLDIMGKSRFYLGDVGNGAAMKLVVNMIMGSMMASFSEGL 799
            DGQLIFLTAGD++LYE VAPFLDIMGKSRFYLGDVGNGAAMKLVVNMIMGSMMA+FSEGL
Sbjct: 195  DGQLIFLTAGDKSLYETVAPFLDIMGKSRFYLGDVGNGAAMKLVVNMIMGSMMAAFSEGL 254

Query: 800  LLSKKVGLDPSVLVEVVSQGAISAPMFSMKGPSMVQAVYPTAFPLKHQQKDLRLALGLAE 979
            LLS+KVGLDP+ +VEVVSQGAISAPM+ +KGP+M+++ YPTAFPLKHQQKDLRLALGLAE
Sbjct: 255  LLSEKVGLDPNDVVEVVSQGAISAPMYKLKGPAMIKSQYPTAFPLKHQQKDLRLALGLAE 314

Query: 980  SVSQPTPIAAAANELYKVAKSHGLSDQDFSAVIEALKPQFQ 1102
            SVSQ TPIAAAANELYKVAKS GLSDQDFSAVIEALK + Q
Sbjct: 315  SVSQSTPIAAAANELYKVAKSRGLSDQDFSAVIEALKVKLQ 355


>ref|XP_002521394.1| 3-hydroxyisobutyrate dehydrogenase, putative [Ricinus communis]
            gi|223539472|gb|EEF41062.1| 3-hydroxyisobutyrate
            dehydrogenase, putative [Ricinus communis]
          Length = 348

 Score =  505 bits (1301), Expect = e-141
 Identities = 268/358 (74%), Positives = 295/358 (82%), Gaps = 1/358 (0%)
 Frame = +2

Query: 32   NNSCSFLSSVILASSITPSPTMAMSSTFLPQIXXXXXXXXXXXXXIKPLFSTCSKAFS-S 208
            NNS S LS+              M S+F PQ+              +  F    KAFS S
Sbjct: 8    NNSHSLLST--------------MCSSFCPQLPSHLRAIPISSFLTRQSF----KAFSVS 49

Query: 209  QSSKENESPAHIGFLGLGIMGTPMAQNLIKAGCDVTVWNRTKSKCDSLISLGAKYKSSPE 388
             S K + S   +GFLG+GIMGTPM QNLIKAGCDVTVWNRTKSKCD LISLGAKY+ SPE
Sbjct: 50   ASVKADGSSTRVGFLGMGIMGTPMTQNLIKAGCDVTVWNRTKSKCDPLISLGAKYRPSPE 109

Query: 389  EVASSCDVTFAMLADPESAVDVACGEYGAANGLSPGKGYVDVSTVDGATSKLIDKQVKAT 568
            EVA++ DVTFAMLADPESAV+VACG+ GAA G+ PGKGYVDVSTVDG TSKLI   +KAT
Sbjct: 110  EVAAASDVTFAMLADPESAVEVACGKNGAAGGMGPGKGYVDVSTVDGGTSKLIGGHIKAT 169

Query: 569  GALFLEAPVSGSKKPAEDGQLIFLTAGDEALYEMVAPFLDIMGKSRFYLGDVGNGAAMKL 748
            GA FLEAPVSGSKKPAEDGQLIFLTAGD+ LYE+VAPFLDIMGKSRFYLGDVGNGAAMKL
Sbjct: 170  GASFLEAPVSGSKKPAEDGQLIFLTAGDKPLYEIVAPFLDIMGKSRFYLGDVGNGAAMKL 229

Query: 749  VVNMIMGSMMASFSEGLLLSKKVGLDPSVLVEVVSQGAISAPMFSMKGPSMVQAVYPTAF 928
            VVNMIMGSMMA+FSEG+LL +KVGLDP+V+VEVVSQGAISAPM+SMKGPSM++++YPTAF
Sbjct: 230  VVNMIMGSMMATFSEGILLGEKVGLDPNVIVEVVSQGAISAPMYSMKGPSMIKSIYPTAF 289

Query: 929  PLKHQQKDLRLALGLAESVSQPTPIAAAANELYKVAKSHGLSDQDFSAVIEALKPQFQ 1102
            PLKHQQKDLRLALGLAESVSQPTPIAAAANELYKVAKSHGLSD DFSAVIEALK + Q
Sbjct: 290  PLKHQQKDLRLALGLAESVSQPTPIAAAANELYKVAKSHGLSDSDFSAVIEALKVKLQ 347


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