BLASTX nr result
ID: Coptis21_contig00004100
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00004100 (869 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|ABK25685.1| unknown [Picea sitchensis] 149 1e-33 ref|XP_002326335.1| predicted protein [Populus trichocarpa] gi|2... 145 9e-33 ref|XP_002529708.1| Mitochondrial import inner membrane transloc... 142 1e-31 ref|XP_002279532.1| PREDICTED: mitochondrial import inner membra... 142 1e-31 ref|XP_002311111.1| predicted protein [Populus trichocarpa] gi|2... 142 1e-31 >gb|ABK25685.1| unknown [Picea sitchensis] Length = 112 Score = 149 bits (375), Expect = 1e-33 Identities = 67/88 (76%), Positives = 78/88 (88%) Frame = -2 Query: 658 WQAFKARPPTARLRKFYDGGFEPSMTRREASRILNVRESAPPDKIKDAHRKIMAANHPDR 479 WQAFKARPPT RLRKFY+GGF+P+MTRREA+ IL +RE AP DK+K+AHRK+M ANHPD Sbjct: 25 WQAFKARPPTPRLRKFYEGGFQPTMTRREAALILGLREGAPADKVKEAHRKVMVANHPDA 84 Query: 478 GGSGYLARKINEAKDMLLGKTKGGGSAF 395 GGS YLA K+NEAKD++LGKTK GGSAF Sbjct: 85 GGSDYLASKVNEAKDVMLGKTKSGGSAF 112 >ref|XP_002326335.1| predicted protein [Populus trichocarpa] gi|222833528|gb|EEE72005.1| predicted protein [Populus trichocarpa] Length = 112 Score = 145 bits (367), Expect = 9e-33 Identities = 68/88 (77%), Positives = 77/88 (87%) Frame = -2 Query: 658 WQAFKARPPTARLRKFYDGGFEPSMTRREASRILNVRESAPPDKIKDAHRKIMAANHPDR 479 WQAFKARPPTAR+RKFY+GGF+ MTRREA+ IL VRES DK+K+AHR++M ANHPD Sbjct: 25 WQAFKARPPTARMRKFYEGGFQSVMTRREAALILGVRESTAADKVKEAHRRVMVANHPDA 84 Query: 478 GGSGYLARKINEAKDMLLGKTKGGGSAF 395 GGS YLA KINEAKD+LLGKTKGGGSAF Sbjct: 85 GGSHYLASKINEAKDILLGKTKGGGSAF 112 >ref|XP_002529708.1| Mitochondrial import inner membrane translocase subunit TIM14, putative [Ricinus communis] gi|223530810|gb|EEF32674.1| Mitochondrial import inner membrane translocase subunit TIM14, putative [Ricinus communis] Length = 112 Score = 142 bits (358), Expect = 1e-31 Identities = 69/112 (61%), Positives = 79/112 (70%) Frame = -2 Query: 730 MGTPFXXXXXXXXXXXXXXXXXXAWQAFKARPPTARLRKFYDGGFEPSMTRREASRILNV 551 M TPF AWQAFKARPP + RKFYDGGF+P MTRREA+ IL + Sbjct: 1 MATPFFAGLAVAAAALAGRYGIQAWQAFKARPPKPKFRKFYDGGFQPKMTRREAALILGI 60 Query: 550 RESAPPDKIKDAHRKIMAANHPDRGGSGYLARKINEAKDMLLGKTKGGGSAF 395 RE+A DK+K+AHRK+M ANHPD GGS YLA KINEAKD +LGKT+ GGSAF Sbjct: 61 RENATADKVKEAHRKVMVANHPDAGGSHYLASKINEAKDTMLGKTRDGGSAF 112 >ref|XP_002279532.1| PREDICTED: mitochondrial import inner membrane translocase subunit TIM14-like [Vitis vinifera] Length = 110 Score = 142 bits (357), Expect = 1e-31 Identities = 71/112 (63%), Positives = 81/112 (72%) Frame = -2 Query: 730 MGTPFXXXXXXXXXXXXXXXXXXAWQAFKARPPTARLRKFYDGGFEPSMTRREASRILNV 551 MGTP AWQAFKARPPT LRKFY+GGF+P+MTRREA+ IL + Sbjct: 1 MGTPLVAGLAVAAAALAGRYGIQAWQAFKARPPT--LRKFYEGGFQPTMTRREAALILGI 58 Query: 550 RESAPPDKIKDAHRKIMAANHPDRGGSGYLARKINEAKDMLLGKTKGGGSAF 395 RES P DK+K+AHRK+M ANHPD GGS YLA KINEAKDM+LGKT+G SAF Sbjct: 59 RESTPADKVKEAHRKVMVANHPDAGGSHYLASKINEAKDMMLGKTRGSESAF 110 >ref|XP_002311111.1| predicted protein [Populus trichocarpa] gi|222850931|gb|EEE88478.1| predicted protein [Populus trichocarpa] Length = 112 Score = 142 bits (357), Expect = 1e-31 Identities = 68/112 (60%), Positives = 81/112 (72%) Frame = -2 Query: 730 MGTPFXXXXXXXXXXXXXXXXXXAWQAFKARPPTARLRKFYDGGFEPSMTRREASRILNV 551 M TPF AWQ+FKARPP R+RKFYDGGF+P MTRREA+ IL + Sbjct: 1 MATPFLAGLAIAAAALAGKYGVQAWQSFKARPPKPRIRKFYDGGFQPKMTRREAALILGI 60 Query: 550 RESAPPDKIKDAHRKIMAANHPDRGGSGYLARKINEAKDMLLGKTKGGGSAF 395 RE+A +K+K+AHR++M ANHPD GGS YLA KINEAKD++LGKTK GGSAF Sbjct: 61 RENAGAEKVKEAHRRVMVANHPDAGGSHYLASKINEAKDVMLGKTKDGGSAF 112