BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00003981
         (1113 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284989.1| PREDICTED: proteasome subunit beta type-4 is...   440   e-121
ref|XP_002889738.1| 20S proteasome beta subunit PBG1 [Arabidopsi...   415   e-114
ref|XP_002891960.1| hypothetical protein ARALYDRAFT_474808 [Arab...   414   e-113
ref|XP_004149546.1| PREDICTED: proteasome subunit beta type-4-li...   414   e-113
gb|AAC32074.1| 20S proteasome beta subunit PBG1 [Arabidopsis tha...   412   e-113

>ref|XP_002284989.1| PREDICTED: proteasome subunit beta type-4 isoform 1 [Vitis
           vinifera] gi|297746225|emb|CBI16281.3| unnamed protein
           product [Vitis vinifera]
          Length = 245

 Score =  440 bits (1132), Expect = e-121
 Identities = 206/232 (88%), Positives = 224/232 (96%)
 Frame = +2

Query: 188 LASELDSQRTLNPYVTGTSVVGIKYKDGILMASDMGGSYGSTLRYKSVERLKPIGKHSLL 367
           L S+ DSQRTL PYVTGTSV+G+KYKDGILMA+DMGGSYGSTLRYKSVER+KPIGKHSLL
Sbjct: 14  LCSQADSQRTLYPYVTGTSVIGVKYKDGILMAADMGGSYGSTLRYKSVERMKPIGKHSLL 73

Query: 368 GASGEISDFQEILRYLDELIIYDNMWDDGNSLGPKEIHNYLNRVMYNRRNKFDPLWNSLV 547
           GASGEISDFQEIL YLDELI+YDNMWDDGNSLGPKE+H+YL RVMYNRRNKF+PLWNSLV
Sbjct: 74  GASGEISDFQEILHYLDELILYDNMWDDGNSLGPKEVHSYLTRVMYNRRNKFNPLWNSLV 133

Query: 548 LGGVKNGQKYLGTVSMIGVHFEDNHIATGFGNHLARPILRDEWKEDMSFEEGVKLLEKCM 727
           LGGVKNGQKYLGTVSMIGVHFEDNH+ATGFGNHLARPILRDEW ED+SFE+GVKLLEKCM
Sbjct: 134 LGGVKNGQKYLGTVSMIGVHFEDNHVATGFGNHLARPILRDEWHEDLSFEDGVKLLEKCM 193

Query: 728 LVLLYRDRSAINKLQIAKITEEGITVSQPYALKTFWGFTAYQNPTKGAEGSW 883
            VLLYRDRSA+NKLQIAKITEEG+T+SQPY+LKTFWGF+A+QNPT GAEGSW
Sbjct: 194 RVLLYRDRSAVNKLQIAKITEEGVTISQPYSLKTFWGFSAFQNPTVGAEGSW 245


>ref|XP_002889738.1| 20S proteasome beta subunit PBG1 [Arabidopsis lyrata subsp. lyrata]
           gi|297335580|gb|EFH65997.1| 20S proteasome beta subunit
           PBG1 [Arabidopsis lyrata subsp. lyrata]
          Length = 245

 Score =  415 bits (1067), Expect = e-114
 Identities = 199/247 (80%), Positives = 224/247 (90%)
 Frame = +2

Query: 143 FRLPVSLNMDSGKGLLASELDSQRTLNPYVTGTSVVGIKYKDGILMASDMGGSYGSTLRY 322
           F +P+    ++G G+  +E DSQRTL PYVTGTSVV IKYKDGILMASDMGGSYGSTLRY
Sbjct: 3   FMIPI----ENGNGVKNAEADSQRTLYPYVTGTSVVAIKYKDGILMASDMGGSYGSTLRY 58

Query: 323 KSVERLKPIGKHSLLGASGEISDFQEILRYLDELIIYDNMWDDGNSLGPKEIHNYLNRVM 502
           K++ER+K IGKHSLLGASGEISDFQEILRYLDEL++ DNMWDDGNSLGPKE+ NYL RV+
Sbjct: 59  KNIERMKAIGKHSLLGASGEISDFQEILRYLDELMLNDNMWDDGNSLGPKEVLNYLTRVV 118

Query: 503 YNRRNKFDPLWNSLVLGGVKNGQKYLGTVSMIGVHFEDNHIATGFGNHLARPILRDEWKE 682
           YNRRNKF+PLWN+LV+GGVK G+KYLG VSMIGV FEDNH+ATGFGNHLARPILRDEW+E
Sbjct: 119 YNRRNKFNPLWNTLVVGGVKYGEKYLGMVSMIGVSFEDNHVATGFGNHLARPILRDEWRE 178

Query: 683 DMSFEEGVKLLEKCMLVLLYRDRSAINKLQIAKITEEGITVSQPYALKTFWGFTAYQNPT 862
           D+SFEEGVKLLEKCM VLLYRDRSAINKLQIAK+TEEG+TVS+PY+LKTFW F A+ NPT
Sbjct: 179 DLSFEEGVKLLEKCMRVLLYRDRSAINKLQIAKMTEEGVTVSEPYSLKTFWDFKAFTNPT 238

Query: 863 KGAEGSW 883
            GAEGSW
Sbjct: 239 VGAEGSW 245


>ref|XP_002891960.1| hypothetical protein ARALYDRAFT_474808 [Arabidopsis lyrata subsp.
           lyrata] gi|297337802|gb|EFH68219.1| hypothetical protein
           ARALYDRAFT_474808 [Arabidopsis lyrata subsp. lyrata]
          Length = 246

 Score =  414 bits (1064), Expect = e-113
 Identities = 196/243 (80%), Positives = 222/243 (91%)
 Frame = +2

Query: 155 VSLNMDSGKGLLASELDSQRTLNPYVTGTSVVGIKYKDGILMASDMGGSYGSTLRYKSVE 334
           +++ +D+G  +  +E +SQRTL PYVTGTS+V IKYKDG+LMASDMGGSYGSTLRYK++E
Sbjct: 4   LTVPIDNGDSVKIAEEESQRTLYPYVTGTSIVAIKYKDGVLMASDMGGSYGSTLRYKNIE 63

Query: 335 RLKPIGKHSLLGASGEISDFQEILRYLDELIIYDNMWDDGNSLGPKEIHNYLNRVMYNRR 514
           R+K IGKHSLLGASGEISDFQEILRYLDEL + DNMWDDGNSLGPKEIHNYL RVMYNRR
Sbjct: 64  RVKAIGKHSLLGASGEISDFQEILRYLDELTLNDNMWDDGNSLGPKEIHNYLTRVMYNRR 123

Query: 515 NKFDPLWNSLVLGGVKNGQKYLGTVSMIGVHFEDNHIATGFGNHLARPILRDEWKEDMSF 694
           NKF+PLWN+LVLGGVKNG+ YLG VSMIGV FED+H+ATGFGNHLARPILRDEW  D+SF
Sbjct: 124 NKFNPLWNTLVLGGVKNGKSYLGMVSMIGVSFEDDHVATGFGNHLARPILRDEWHADLSF 183

Query: 695 EEGVKLLEKCMLVLLYRDRSAINKLQIAKITEEGITVSQPYALKTFWGFTAYQNPTKGAE 874
           E+GVKLLEKCM VLLYRDRSAINKLQIAKITEEG+TVSQPY+LKTFW F+++ NPT GAE
Sbjct: 184 EDGVKLLEKCMRVLLYRDRSAINKLQIAKITEEGVTVSQPYSLKTFWEFSSFHNPTAGAE 243

Query: 875 GSW 883
           GSW
Sbjct: 244 GSW 246


>ref|XP_004149546.1| PREDICTED: proteasome subunit beta type-4-like [Cucumis sativus]
          Length = 245

 Score =  414 bits (1063), Expect = e-113
 Identities = 194/234 (82%), Positives = 216/234 (92%)
 Frame = +2

Query: 182 GLLASELDSQRTLNPYVTGTSVVGIKYKDGILMASDMGGSYGSTLRYKSVERLKPIGKHS 361
           GLL  E   QRT  PYVTGTSVV IKYKDGILM SD+GGSYGSTLRYKSVER+K IGKHS
Sbjct: 12  GLLCPEAPIQRTQYPYVTGTSVVAIKYKDGILMVSDLGGSYGSTLRYKSVERIKAIGKHS 71

Query: 362 LLGASGEISDFQEILRYLDELIIYDNMWDDGNSLGPKEIHNYLNRVMYNRRNKFDPLWNS 541
           LLGASGEISDFQ++LR LD+LI+YDNMWDDGN+LGPKEIH+YL RVMYNRRNKFDP WN+
Sbjct: 72  LLGASGEISDFQQLLRDLDQLILYDNMWDDGNALGPKEIHSYLTRVMYNRRNKFDPYWNA 131

Query: 542 LVLGGVKNGQKYLGTVSMIGVHFEDNHIATGFGNHLARPILRDEWKEDMSFEEGVKLLEK 721
           LVLGGVKNGQKYLGTV+MIGV FEDNH+ TGFGNHLARPILRDEW+ED++FEEGVKLLEK
Sbjct: 132 LVLGGVKNGQKYLGTVNMIGVTFEDNHVTTGFGNHLARPILRDEWREDLTFEEGVKLLEK 191

Query: 722 CMLVLLYRDRSAINKLQIAKITEEGITVSQPYALKTFWGFTAYQNPTKGAEGSW 883
           CM VLLYRDRSA+NKLQIAKITEEG+T+SQPY+LKTFW ++A++NPT GAEGSW
Sbjct: 192 CMRVLLYRDRSAVNKLQIAKITEEGVTISQPYSLKTFWNYSAFENPTSGAEGSW 245


>gb|AAC32074.1| 20S proteasome beta subunit PBG1 [Arabidopsis thaliana]
          Length = 246

 Score =  412 bits (1059), Expect = e-113
 Identities = 196/242 (80%), Positives = 220/242 (90%)
 Frame = +2

Query: 158 SLNMDSGKGLLASELDSQRTLNPYVTGTSVVGIKYKDGILMASDMGGSYGSTLRYKSVER 337
           S+ +D+G  +  +E +SQRTL PYVTGTSVV IKYKDG+LMASDMGGSYGSTLRYK++ER
Sbjct: 5   SVPIDNGDSMKIAEEESQRTLYPYVTGTSVVAIKYKDGVLMASDMGGSYGSTLRYKNIER 64

Query: 338 LKPIGKHSLLGASGEISDFQEILRYLDELIIYDNMWDDGNSLGPKEIHNYLNRVMYNRRN 517
           +K IGKHSLLGASGEISDFQEILRYLDEL + DNMWDDGNSLGPKEIHNYL RVMYNRRN
Sbjct: 65  VKAIGKHSLLGASGEISDFQEILRYLDELTLNDNMWDDGNSLGPKEIHNYLTRVMYNRRN 124

Query: 518 KFDPLWNSLVLGGVKNGQKYLGTVSMIGVHFEDNHIATGFGNHLARPILRDEWKEDMSFE 697
           KF+PLWN+LVLGGVKNG+ YLG VSMIGV FED+H+ATGFGNHLARPILRDEW  D+SFE
Sbjct: 125 KFNPLWNTLVLGGVKNGKSYLGMVSMIGVSFEDDHVATGFGNHLARPILRDEWHADLSFE 184

Query: 698 EGVKLLEKCMLVLLYRDRSAINKLQIAKITEEGITVSQPYALKTFWGFTAYQNPTKGAEG 877
           +GVKLLEKCM VLLYRDRSAINKLQIAKITEEG+TVSQPY+LKT+W F+++ NPT GA G
Sbjct: 185 DGVKLLEKCMRVLLYRDRSAINKLQIAKITEEGVTVSQPYSLKTYWEFSSFHNPTAGAAG 244

Query: 878 SW 883
           SW
Sbjct: 245 SW 246