BLASTX nr result

ID: Coptis21_contig00003976 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00003976
         (1834 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280403.1| PREDICTED: uncharacterized protein LOC100244...   364   4e-98
ref|XP_002314123.1| predicted protein [Populus trichocarpa] gi|2...   363   6e-98
ref|XP_002525595.1| DNA binding protein, putative [Ricinus commu...   362   1e-97
ref|XP_002299827.1| predicted protein [Populus trichocarpa] gi|2...   356   1e-95
gb|AFH03060.1| R2R3-MYB transcription factor MYB8 [Epimedium sag...   355   3e-95

>ref|XP_002280403.1| PREDICTED: uncharacterized protein LOC100244960 [Vitis vinifera]
            gi|147844863|emb|CAN81229.1| hypothetical protein
            VITISV_033664 [Vitis vinifera]
          Length = 307

 Score =  364 bits (935), Expect = 4e-98
 Identities = 183/308 (59%), Positives = 219/308 (71%), Gaps = 6/308 (1%)
 Frame = +2

Query: 587  MKWGMEILSPYS-----NWLLGGTKITKWTQQENKLFENALAIYDKETPDRWQKVADMIP 751
            MKW MEILSP S     N LL  +K ++WT +ENK FENALA+YD++TPDRWQKVA MIP
Sbjct: 1    MKWEMEILSPASYLSNSNCLLEESKSSRWTPEENKTFENALAVYDRDTPDRWQKVAAMIP 60

Query: 752  GKSVNDVFNQYKELENDVSDIEAGLIPIPGYTTSSFSFEWMNENGDFDGLKQSYGAGVKR 931
            GK+V DVF QYKELE DV  IEAGL+PIPGY+TS F+ EW   +G ++GLKQ YG G KR
Sbjct: 61   GKTVGDVFKQYKELELDVGKIEAGLVPIPGYSTSPFTLEWTTNHG-YEGLKQPYGLGGKR 119

Query: 932  TSSTRPSDHERKKGVPWTEEEHXXXXXXXXXXXXXDWRNISRNFVITRTPTQVASHAQKY 1111
             SSTRP+D ERKKGVPWTEEEH             DWRNISRNFV+TRTPTQVASHAQKY
Sbjct: 120  PSSTRPTDQERKKGVPWTEEEHKLFLLGLKKYGKGDWRNISRNFVVTRTPTQVASHAQKY 179

Query: 1112 FIRQHSGGKDKRRSSIHDITTVNCLE-NAPSPDNNKPHSPDQSTMLSQQPKESHAAKPQF 1288
            FIRQ SGGKDKRR+SIHDITTVN  +   PSP+N +P SPDQS  + +QP  +   +  F
Sbjct: 180  FIRQLSGGKDKRRASIHDITTVNLTDTRTPSPENKRPPSPDQSIGVPKQPNSAPMNRTTF 239

Query: 1289 GWNHPHNRANMTFNSNHGNMFMVPPYAITSNEMKLMGQNLSRGILHGSQVIPQRTVVQLH 1468
             W+ P++ A M FN  HGN+FM  PY + S  +K+ GQNL R   + S + PQ  V Q+ 
Sbjct: 240  QWSQPNSGAPMAFNPTHGNIFMSSPYGMNSYGLKMQGQNLHRAAFNESYIGPQSMVFQMQ 299

Query: 1469 SSQCHPNG 1492
            S+   P+G
Sbjct: 300  STPHFPHG 307


>ref|XP_002314123.1| predicted protein [Populus trichocarpa] gi|222850531|gb|EEE88078.1|
            predicted protein [Populus trichocarpa]
          Length = 308

 Score =  363 bits (933), Expect = 6e-98
 Identities = 190/309 (61%), Positives = 218/309 (70%), Gaps = 7/309 (2%)
 Frame = +2

Query: 587  MKWGMEILSP-----YSNWLLGGTKITKWTQQENKLFENALAIYDKETPDRWQKVADMIP 751
            MKW  EILSP      SNWL   +K TKWT  ENK FENALAIYDKET DRW KVA MIP
Sbjct: 1    MKWETEILSPGSYLSSSNWLAEESKNTKWTIAENKAFENALAIYDKETSDRWHKVAAMIP 60

Query: 752  GKSVNDVFNQYKELENDVSDIEAGLIPIPGYTTSSFSFEWMNENG-DFDGLKQSYGAGVK 928
            GK+V DV  QYKELE DVS IEAGLIP+PGY++S F+ +W+N NG  +DG KQSYG G K
Sbjct: 61   GKTVEDVIKQYKELELDVSYIEAGLIPVPGYSSSPFTLDWVNGNGYGYDGFKQSYGLGGK 120

Query: 929  RTSSTRPSDHERKKGVPWTEEEHXXXXXXXXXXXXXDWRNISRNFVITRTPTQVASHAQK 1108
            R+S+ RP+D ERKKGVPWTEEEH             DWRNISRNFVI+RTPTQVASHAQK
Sbjct: 121  RSSTGRPTDQERKKGVPWTEEEHKLFLMGLKKYGKGDWRNISRNFVISRTPTQVASHAQK 180

Query: 1109 YFIRQHSGGKDKRRSSIHDITTVNCLE-NAPSPDNNKPHSPDQSTMLSQQPKESHAAKPQ 1285
            YFIRQ SGGKDKRR+SIHDITTVN  E   PSPD NK  SPDQS  +SQQP  +   +  
Sbjct: 181  YFIRQLSGGKDKRRASIHDITTVNLNETRTPSPD-NKRTSPDQSGAISQQPNSAAMPRTH 239

Query: 1286 FGWNHPHNRANMTFNSNHGNMFMVPPYAITSNEMKLMGQNLSRGILHGSQVIPQRTVVQL 1465
            F WN P++ A M FNS + NMFM  PY I S  +K+ GQN  RG +H S +  Q    Q+
Sbjct: 240  FQWNQPNSGATMAFNSTNANMFMSSPYGINSYGLKMQGQNPHRGAVHDSYIGQQTMGFQM 299

Query: 1466 HSSQCHPNG 1492
             S+Q +P+G
Sbjct: 300  QSAQHYPHG 308


>ref|XP_002525595.1| DNA binding protein, putative [Ricinus communis]
            gi|223535031|gb|EEF36713.1| DNA binding protein, putative
            [Ricinus communis]
          Length = 307

 Score =  362 bits (930), Expect = 1e-97
 Identities = 182/308 (59%), Positives = 217/308 (70%), Gaps = 6/308 (1%)
 Frame = +2

Query: 587  MKWGMEILSPYS-----NWLLGGTKITKWTQQENKLFENALAIYDKETPDRWQKVADMIP 751
            MKW + +LSP S     NWL+  +K TKWT  ENK+FENALA+YDK+TPDRW KVA MIP
Sbjct: 1    MKWDIGVLSPTSYLSSTNWLIEESKNTKWTPAENKMFENALAVYDKDTPDRWHKVAAMIP 60

Query: 752  GKSVNDVFNQYKELENDVSDIEAGLIPIPGYTTSSFSFEWMNENGDFDGLKQSYGAGVKR 931
            GK+V DV  QY+ELE DV++IEAGL+PIPGY TS+F+ +W+N N  +DG K SY  G KR
Sbjct: 61   GKTVGDVIKQYRELEVDVNNIEAGLVPIPGYNTSAFTLDWVNSNS-YDGFKPSYAFGGKR 119

Query: 932  TSSTRPSDHERKKGVPWTEEEHXXXXXXXXXXXXXDWRNISRNFVITRTPTQVASHAQKY 1111
            +SS RP+D ERKKGVPWTEEEH             DWRNISRNFV+TRTPTQVASHAQKY
Sbjct: 120  SSSGRPADQERKKGVPWTEEEHKLFLMGLKKYGKGDWRNISRNFVVTRTPTQVASHAQKY 179

Query: 1112 FIRQHSGGKDKRRSSIHDITTVNCLE-NAPSPDNNKPHSPDQSTMLSQQPKESHAAKPQF 1288
            FIRQ SGGKDKRR+SIHDITTVN  E   PSP+N +  SPDQS++ SQQ       +  F
Sbjct: 180  FIRQLSGGKDKRRASIHDITTVNLNEIRTPSPENKRQASPDQSSVFSQQSNGVSLPRTHF 239

Query: 1289 GWNHPHNRANMTFNSNHGNMFMVPPYAITSNEMKLMGQNLSRGILHGSQVIPQRTVVQLH 1468
             WN P++ A M FNS +GNMF    Y + S  MKL G NL  G LH S + PQ    Q+ 
Sbjct: 240  QWNQPNSGAIMAFNSTNGNMFTSSTYGVNSYGMKLQGYNLHSGSLHESYIGPQTIAFQMQ 299

Query: 1469 SSQCHPNG 1492
            S+Q +P+G
Sbjct: 300  SAQHYPDG 307


>ref|XP_002299827.1| predicted protein [Populus trichocarpa] gi|222847085|gb|EEE84632.1|
            predicted protein [Populus trichocarpa]
          Length = 302

 Score =  356 bits (913), Expect = 1e-95
 Identities = 181/304 (59%), Positives = 216/304 (71%), Gaps = 6/304 (1%)
 Frame = +2

Query: 599  MEILSPYS-----NWLLGGTKITKWTQQENKLFENALAIYDKETPDRWQKVADMIPGKSV 763
            M ILSP S     NWLL  +K TKWT  ENK FENALA+YD++TPDRW KVA MIPGK+V
Sbjct: 1    MGILSPASYLSSTNWLLEESKNTKWTPAENKAFENALAVYDEDTPDRWHKVAAMIPGKTV 60

Query: 764  NDVFNQYKELENDVSDIEAGLIPIPGYTTSSFSFEWMNENGDFDGLKQSYGAGVKRTSST 943
             DV  QYKELE DVS IEAGLIP+PGY+TS F+ +W++ NG +DG KQSYG G KR+S+ 
Sbjct: 61   GDVIKQYKELELDVSYIEAGLIPVPGYSTSPFTLDWVDGNG-YDGFKQSYGLGGKRSSTG 119

Query: 944  RPSDHERKKGVPWTEEEHXXXXXXXXXXXXXDWRNISRNFVITRTPTQVASHAQKYFIRQ 1123
            RP+D ERKKGVPWTEEEH             DWRNISRNFV++RTPTQVASHAQKYFIRQ
Sbjct: 120  RPADQERKKGVPWTEEEHKLFLMGLKKYGKGDWRNISRNFVVSRTPTQVASHAQKYFIRQ 179

Query: 1124 HSGGKDKRRSSIHDITTVNCLE-NAPSPDNNKPHSPDQSTMLSQQPKESHAAKPQFGWNH 1300
             SGGKDKRR+SIHDITTVN  +   PSPDN +P SPDQ   +SQQP  +   +  F WN 
Sbjct: 180  LSGGKDKRRASIHDITTVNLNDARTPSPDNKRP-SPDQPGAISQQPNSAAMPRTHFQWNQ 238

Query: 1301 PHNRANMTFNSNHGNMFMVPPYAITSNEMKLMGQNLSRGILHGSQVIPQRTVVQLHSSQC 1480
            P+    + FNS + NMFM  PY I+S  +K+ GQNL RG +H S +  Q    Q+ S+  
Sbjct: 239  PNGGGTLAFNSTNANMFMSAPYGISSYGLKMQGQNLPRGAVHDSYIRQQTMGFQMPSAHH 298

Query: 1481 HPNG 1492
            +P+G
Sbjct: 299  YPHG 302


>gb|AFH03060.1| R2R3-MYB transcription factor MYB8 [Epimedium sagittatum]
          Length = 298

 Score =  355 bits (910), Expect = 3e-95
 Identities = 188/304 (61%), Positives = 213/304 (70%), Gaps = 6/304 (1%)
 Frame = +2

Query: 599  MEILSPYS-----NWLLGGTKITKWTQQENKLFENALAIYDKETPDRWQKVADMIPGKSV 763
            MEI SP +     NWLL  +K  KWT +ENKLFE ALAI DKETPDRWQKVA+MIPGK+V
Sbjct: 1    MEIQSPRTYHSNTNWLLEQSKTAKWTHEENKLFETALAICDKETPDRWQKVAEMIPGKTV 60

Query: 764  NDVFNQYKELENDVSDIEAGLIPIPGYTTSSFSFEWMNENGDFDGLKQSYGAGVKRTSST 943
            +DV  QYKELE+DVSDIEAGL+PIPGYTTS F+ +WMN N  F    QS+ A  KR+SS 
Sbjct: 61   SDVIKQYKELEDDVSDIEAGLVPIPGYTTS-FTLDWMN-NQTFG---QSFDANGKRSSSG 115

Query: 944  RPSDHERKKGVPWTEEEHXXXXXXXXXXXXXDWRNISRNFVITRTPTQVASHAQKYFIRQ 1123
            RP++ ERKKGVPWTE+EH             DWRNISRNFVITRTPTQVASHAQKYFIRQ
Sbjct: 116  RPTEQERKKGVPWTEDEHKLFLMGLKKYGKGDWRNISRNFVITRTPTQVASHAQKYFIRQ 175

Query: 1124 HSGGKDKRRSSIHDITTVNCLENAPSPDNNKPHSPDQSTMLSQQPKESHAAKPQFGWNHP 1303
             SGGKDKRRSSIHDITTVN  +  P   ++   S +QS ML Q    S   KP FGWN P
Sbjct: 176  LSGGKDKRRSSIHDITTVNLNDTRPPSPDSSRSSLEQSAMLQQSSNHSSTNKPMFGWNQP 235

Query: 1304 HN-RANMTFNSNHGNMFMVPPYAITSNEMKLMGQNLSRGILHGSQVIPQRTVVQLHSSQC 1480
            H+    M FN  + NMF VPPY   S   K+ GQNL RG  HGS + P  TV Q+ SSQC
Sbjct: 236  HDGTPTMVFNHTNMNMF-VPPYGANSYGTKMQGQNLHRGGFHGSHIGPHGTVFQMQSSQC 294

Query: 1481 HPNG 1492
            HP+G
Sbjct: 295  HPHG 298


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