BLASTX nr result

ID: Coptis21_contig00003967 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00003967
         (834 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002521418.1| nucleic acid binding protein, putative [Rici...    87   5e-15
ref|XP_002317234.1| predicted protein [Populus trichocarpa] gi|2...    82   1e-13
gb|AFA45120.1| glycine-rich protein [Medicago sativa]                  82   2e-13
ref|XP_003637773.1| hypothetical protein MTR_102s0003 [Medicago ...    82   2e-13
ref|XP_003593472.1| hypothetical protein MTR_2g012520 [Medicago ...    82   2e-13

>ref|XP_002521418.1| nucleic acid binding protein, putative [Ricinus communis]
           gi|223539317|gb|EEF40908.1| nucleic acid binding
           protein, putative [Ricinus communis]
          Length = 147

 Score = 87.0 bits (214), Expect = 5e-15
 Identities = 39/61 (63%), Positives = 41/61 (67%)
 Frame = -3

Query: 373 SKNGIVRPTVVCNERGPCYKKKLICPAKCFTXXXXXXXXXXXXXXXXGCTMDCTKKCIAY 194
           SK GI+RPTVVC E+GPCYKKKL CPAKCFT                GCTMDC KKCIAY
Sbjct: 87  SKGGIIRPTVVCKEKGPCYKKKLTCPAKCFTSYSRSGKGYGGGGGGGGCTMDCKKKCIAY 146

Query: 193 C 191
           C
Sbjct: 147 C 147


>ref|XP_002317234.1| predicted protein [Populus trichocarpa] gi|222860299|gb|EEE97846.1|
           predicted protein [Populus trichocarpa]
          Length = 142

 Score = 82.0 bits (201), Expect = 1e-13
 Identities = 34/61 (55%), Positives = 41/61 (67%)
 Frame = -3

Query: 373 SKNGIVRPTVVCNERGPCYKKKLICPAKCFTXXXXXXXXXXXXXXXXGCTMDCTKKCIAY 194
           SK G+++P+VVC E+GPCYKKKL CPAKCFT                GCT+DC KKC+AY
Sbjct: 82  SKGGVIKPSVVCKEKGPCYKKKLTCPAKCFTSYSRSGKGYGGGGGGGGCTIDCKKKCVAY 141

Query: 193 C 191
           C
Sbjct: 142 C 142


>gb|AFA45120.1| glycine-rich protein [Medicago sativa]
          Length = 163

 Score = 81.6 bits (200), Expect = 2e-13
 Identities = 36/61 (59%), Positives = 41/61 (67%)
 Frame = -3

Query: 373 SKNGIVRPTVVCNERGPCYKKKLICPAKCFTXXXXXXXXXXXXXXXXGCTMDCTKKCIAY 194
           SKNGIVRPTVVC ++GPCY+KKL CPAKCF+                GCT+DC KKC AY
Sbjct: 103 SKNGIVRPTVVCKDKGPCYQKKLTCPAKCFSSFSRSGKGYGGGGGGGGCTIDCKKKCSAY 162

Query: 193 C 191
           C
Sbjct: 163 C 163


>ref|XP_003637773.1| hypothetical protein MTR_102s0003 [Medicago truncatula]
           gi|355503708|gb|AES84911.1| hypothetical protein
           MTR_102s0003 [Medicago truncatula]
          Length = 146

 Score = 81.6 bits (200), Expect = 2e-13
 Identities = 36/61 (59%), Positives = 41/61 (67%)
 Frame = -3

Query: 373 SKNGIVRPTVVCNERGPCYKKKLICPAKCFTXXXXXXXXXXXXXXXXGCTMDCTKKCIAY 194
           SKNGIVRPTVVC ++GPCY+KKL CPAKCF+                GCT+DC KKC AY
Sbjct: 86  SKNGIVRPTVVCKDKGPCYQKKLTCPAKCFSSFSRSGKGYGGGGGGGGCTIDCKKKCSAY 145

Query: 193 C 191
           C
Sbjct: 146 C 146


>ref|XP_003593472.1| hypothetical protein MTR_2g012520 [Medicago truncatula]
           gi|338809153|gb|AEJ08194.1| glycine-rich protein
           [Medicago truncatula] gi|355482520|gb|AES63723.1|
           hypothetical protein MTR_2g012520 [Medicago truncatula]
           gi|388496786|gb|AFK36459.1| unknown [Medicago
           truncatula]
          Length = 159

 Score = 81.6 bits (200), Expect = 2e-13
 Identities = 36/61 (59%), Positives = 41/61 (67%)
 Frame = -3

Query: 373 SKNGIVRPTVVCNERGPCYKKKLICPAKCFTXXXXXXXXXXXXXXXXGCTMDCTKKCIAY 194
           SKNGIVRPTVVC ++GPCY+KKL CPAKCF+                GCT+DC KKC AY
Sbjct: 99  SKNGIVRPTVVCKDKGPCYQKKLTCPAKCFSSFSRSGKGYGGGGGGGGCTIDCKKKCSAY 158

Query: 193 C 191
           C
Sbjct: 159 C 159


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