BLASTX nr result

ID: Coptis21_contig00003953 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00003953
         (2066 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002318209.1| predicted protein [Populus trichocarpa] gi|2...   392   e-112
ref|XP_002272322.1| PREDICTED: uncharacterized protein LOC100264...   392   e-111
ref|XP_002270742.2| PREDICTED: uncharacterized protein LOC100241...   388   e-108
ref|XP_002513675.1| conserved hypothetical protein [Ricinus comm...   380   e-107
ref|XP_002298027.1| predicted protein [Populus trichocarpa] gi|2...   358   e-100

>ref|XP_002318209.1| predicted protein [Populus trichocarpa] gi|222858882|gb|EEE96429.1|
            predicted protein [Populus trichocarpa]
          Length = 507

 Score =  392 bits (1006), Expect(2) = e-112
 Identities = 238/503 (47%), Positives = 281/503 (55%), Gaps = 67/503 (13%)
 Frame = +1

Query: 247  QPSSS--QKRRWGIRWSGYWCFGSH---RNGKRIGHSALVPEPAVTGTAGASTGNSAHPP 411
            QPSSS  QKRRWG  WS YWCFGSH   +N KRIGH+ LVPEP V G   +ST N     
Sbjct: 27   QPSSSSVQKRRWGGCWSLYWCFGSHGSHKNSKRIGHAVLVPEPEVPGAVSSSTENQTQST 86

Query: 412  TVVLPFXXXXXXXXXFLQSEPPSATQSPAGFLSFTSLSANVYSP-GPNSIFAIGPYAHET 588
             ++LPF         FLQS+PPS+TQSPAG LS TSLSAN YSP GP SIFAIGPYAHET
Sbjct: 87   PILLPFIAPPSSPASFLQSDPPSSTQSPAGLLSLTSLSANAYSPRGPASIFAIGPYAHET 146

Query: 589  QLVSPPVXXXXXXXXXXXXXXXXXXXLHQTTPSSPEVPFAQLLTSSLDASCRNSVASQKF 768
            QLV+PPV                   +  TTPSSPEVPFAQLLTSSL+ + RNS  +QKF
Sbjct: 147  QLVTPPVFSAFTTEPSTAPFTPPPESVQLTTPSSPEVPFAQLLTSSLERARRNSGPNQKF 206

Query: 769  PPSHYEFQSYYLYPGSPVGHLISPSSVISNSGTSSPFLDNEFTSGGHPFLEFRTGEPPKL 948
              SHYEFQSY+LYPGSP G +ISP S ISNSGTSSPF D       HP LEFR GE PKL
Sbjct: 207  SLSHYEFQSYHLYPGSPGGQIISPGSAISNSGTSSPFPDR------HPMLEFRMGEAPKL 260

Query: 949  WSIDGFSTRNWGPHQGSGSITPDPV----------------------------------- 1023
               + FSTR WG   GSGS+TPD                                     
Sbjct: 261  LGFEHFSTRKWGSRLGSGSLTPDATPDGMGLSRLGSGTVTPDGMGLSRLCSGTATPDGAG 320

Query: 1024 ---------------TPPSGDNFHLENQISEVASLANSDNGSQNDDIVIGHRVSFELTAK 1158
                            P S   F LENQISEVASL NS+NGS+ ++ V+ HRVSFEL+ +
Sbjct: 321  LRSRLGSGTLTPDCFVPASQIGFLLENQISEVASLTNSENGSKTEENVVHHRVSFELSGE 380

Query: 1159 VGTNRMGMDHLASVESTAE---------PLLNRAIARATTERDCHCNGAENSINCHEKPS 1311
                 + +  +AS  +  E         P+  R    A     C  NG  +S    E P 
Sbjct: 381  EVARCLEIKSVASTRTFPEYPQDTMPEDPV--RGDRLAMNGERCLQNGEASS----EMPE 434

Query: 1312 STEINKASQINKLESQQEH--GQEPSLTSIGSVKEFNFVNADEETSDKPPVSSDWWANEK 1485
                      N  E++++H   +  S+T +GS+KEFNF N+  E SDKP +SS+WWANE 
Sbjct: 435  K---------NSEETEEDHVYRKHRSIT-LGSIKEFNFDNSKGEVSDKPAISSEWWANET 484

Query: 1486 VVTKEAGTRNGWTFFPMIQPGVS 1554
            +  KEA   N WTFFP++QP VS
Sbjct: 485  IAGKEARPANSWTFFPLLQPEVS 507



 Score = 42.0 bits (97), Expect(2) = e-112
 Identities = 19/26 (73%), Positives = 24/26 (92%)
 Frame = +2

Query: 95  MRRVNNNSVDTVNAAATAIIGAETRV 172
           MR VNN+S++TVNAAATAI+ AE+RV
Sbjct: 1   MRSVNNSSIETVNAAATAIVSAESRV 26


>ref|XP_002272322.1| PREDICTED: uncharacterized protein LOC100264629 [Vitis vinifera]
          Length = 448

 Score =  392 bits (1008), Expect(2) = e-111
 Identities = 228/440 (51%), Positives = 272/440 (61%), Gaps = 4/440 (0%)
 Frame = +1

Query: 247  QPSSSQKRRWGIRWSGYWCFGSHRNGKRIGHSALVPEPAVTGTAGASTGNSAHPPTVVLP 426
            QP++ QKRRWG   S YWCFGSHR+ KRIGH+ LVPEP V G    ++ N     ++VLP
Sbjct: 26   QPTTVQKRRWGSCLSLYWCFGSHRHSKRIGHAVLVPEPMVPGAVAPASENLNLSTSIVLP 85

Query: 427  FXXXXXXXXXFLQSEPPSATQSPAGFLSFTSLSANVYSP-GPNSIFAIGPYAHETQLVSP 603
            F         FLQS+PPS+TQSPAGFLS T+LS N YSP GP S+FAIGPYAHETQLVSP
Sbjct: 86   FIAPPSSPASFLQSDPPSSTQSPAGFLSLTALSVNAYSPSGPASMFAIGPYAHETQLVSP 145

Query: 604  PVXXXXXXXXXXXXXXXXXXXLHQTTPSSPEVPFAQLLTSSLDASCRNSVASQKFPPSHY 783
            PV                   +  TTPSSPEVPFAQLLTSSLD S RNS  +QK   S+Y
Sbjct: 146  PVFSTFPTEPSTAPFTPPPESVQLTTPSSPEVPFAQLLTSSLDRSRRNSGTNQKLSLSNY 205

Query: 784  EFQSYYLYPGSPVGHLISPSSVISNSGTSSPFLDNEFTSGGHPFLEFRTGEPPKLWSIDG 963
            EFQ Y LYP SPVGHLISP   ISNSGTSSPF D        P +     E PKL   + 
Sbjct: 206  EFQPYQLYPESPVGHLISP---ISNSGTSSPFPDR------RPIV-----EAPKLLGFEH 251

Query: 964  FSTRNWGPHQGSGSITPDPVTPPSGDNFHLENQISEVASLANSDNGSQNDDIVIGHRVSF 1143
            FSTR WG   GSGS+TPD   P S D+F LENQISEVASLANS++GSQN + VI HRVSF
Sbjct: 252  FSTRRWGSRLGSGSLTPDGAGPASRDSFLLENQISEVASLANSESGSQNGETVIDHRVSF 311

Query: 1144 ELTAKVGTNRMGMDHLASVESTAEPLLNRAIARATTERDCHCNGAENSINCHEKPSSTEI 1323
            EL  +     +    +AS E T +  L   +     ER+     +E++ NC E      +
Sbjct: 312  ELAGEDVAVCVEKKPVASAE-TVQNTLQDIVEEGEIERE-RDGISESTENCCEFCVGEAL 369

Query: 1324 NKASQINKLESQQE--HGQEPSLTSIGSVKEFNFVNADEETSDKPP-VSSDWWANEKVVT 1494
              AS+    E ++E  H + P +   GS+KEFNF N   E S KP  + S+WW NEKVV 
Sbjct: 370  KAASEKASAEGEEEQCHKKHPPIRH-GSIKEFNFDNTKGEVSAKPNIIGSEWWVNEKVVG 428

Query: 1495 KEAGTRNGWTFFPMIQPGVS 1554
            K  G +  WTFFP++QPG+S
Sbjct: 429  KGTGPQTNWTFFPLLQPGIS 448



 Score = 37.0 bits (84), Expect(2) = e-111
 Identities = 19/26 (73%), Positives = 23/26 (88%)
 Frame = +2

Query: 95  MRRVNNNSVDTVNAAATAIIGAETRV 172
           MR VNN SV+T+NAAATAI+ AE+RV
Sbjct: 1   MRSVNN-SVETINAAATAIVSAESRV 25


>ref|XP_002270742.2| PREDICTED: uncharacterized protein LOC100241023 [Vitis vinifera]
          Length = 479

 Score =  388 bits (997), Expect(2) = e-108
 Identities = 229/454 (50%), Positives = 271/454 (59%), Gaps = 23/454 (5%)
 Frame = +1

Query: 262  QKRRWGIRWSGYWCFGSHRNGKRIGHSALVPEPAVTGTAGASTGNSAHPPTVVLPFXXXX 441
            QKRRWG  W  YWCF S ++ KRIGH+ L PE    G+   +  N    PT+VLPF    
Sbjct: 38   QKRRWGSCWGEYWCFRSPKD-KRIGHAVLAPESRAPGSGVPAAENLTQAPTIVLPFVAPP 96

Query: 442  XXXXXFLQSEPPSATQSPAGFLSFTSLSANVYSP-GPNSIFAIGPYAHETQLVSPPVXXX 618
                 FLQSEPPSATQSP+G LS TS++AN+YSP GP SIFAIGPYAHETQLVSPPV   
Sbjct: 97   SSPASFLQSEPPSATQSPSGLLSLTSINANIYSPGGPASIFAIGPYAHETQLVSPPVFST 156

Query: 619  XXXXXXXXXXXXXXXXLHQTTPSSPEVPFAQLLTSSLDASCRNSVASQKFPPSHYEFQSY 798
                            +H TTPSSPEVPFAQL     D + RN  A  +F  S YEFQSY
Sbjct: 157  FTTEPSTAPFTPPPESVHLTTPSSPEVPFAQL----FDPNNRNGEAGHRFLLSQYEFQSY 212

Query: 799  YLYPGSPVGHLISPSSVISNSGTSSPFLDNEFT-SGGHPFLEFRTGEPPKLWSIDGFSTR 975
             LYPGSPVGHLISPSS IS SGTSSPF D +F  SG   FLEFR G PPKL ++D  S  
Sbjct: 213  QLYPGSPVGHLISPSSGISGSGTSSPFPDRDFVCSGSSQFLEFRAGGPPKLLTLDKLSNH 272

Query: 976  NWGPHQGSGSITPDP------------------VTPPSGDNFHLENQISEVASLANSDNG 1101
             WG   GSGSITPD                   + PPSGD+  L+ QIS+VAS + SD+G
Sbjct: 273  EWGSRIGSGSITPDALGPPSRDGSVLDRQVSDVIHPPSGDDSVLDRQISDVASHSLSDSG 332

Query: 1102 SQNDDIVIGHRVSFELTAKVGTNRMGMDHLASVESTAEPLLNRAIARATTERDCHCNGAE 1281
              N++I++ HRVSFELTA+     +  D  A V++ +  L N     AT E D   N  E
Sbjct: 333  CPNNEIMVDHRVSFELTAEDVVRCVEKDSAALVKAVSASLQN----PATVEID--ENSRE 386

Query: 1282 NSINCHEKPSSTEIN---KASQINKLESQQEHGQEPSLTSIGSVKEFNFVNADEETSDKP 1452
              ++   +   T  N   KA +    E  Q H ++ S+T +GS KEFNF NAD   SDKP
Sbjct: 387  VVVDSEGRVGETANNPPEKAPEDANGEEGQPHHKQRSIT-LGSAKEFNFDNADGGHSDKP 445

Query: 1453 PVSSDWWANEKVVTKEAGTRNGWTFFPMIQPGVS 1554
             +SSDWWANEKVV KE G    W+ F M+QP VS
Sbjct: 446  NISSDWWANEKVVGKEVGASKNWSIFHMMQPSVS 479



 Score = 31.2 bits (69), Expect(2) = e-108
 Identities = 17/32 (53%), Positives = 22/32 (68%), Gaps = 6/32 (18%)
 Frame = +2

Query: 95  MRRVN------NNSVDTVNAAATAIIGAETRV 172
           MR VN      N++++T+NAAATAI  AE RV
Sbjct: 1   MRSVNGDTRSMNSALETINAAATAIASAENRV 32


>ref|XP_002513675.1| conserved hypothetical protein [Ricinus communis]
            gi|223547583|gb|EEF49078.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 510

 Score =  380 bits (977), Expect(2) = e-107
 Identities = 230/493 (46%), Positives = 275/493 (55%), Gaps = 57/493 (11%)
 Frame = +1

Query: 247  QPSSSQKRRWGIRWSGYWCFGSHRNGKRIGHSALVPEPAVTGTAGASTGNSAHPPTVVLP 426
            QP++ QKRRWG  WS YWCFGSH+  KRIGH+ L PEP V G    S  N +    + +P
Sbjct: 40   QPTTVQKRRWGGCWSLYWCFGSHKT-KRIGHAVLAPEPEVQGAVVTSAENQSQSTAITVP 98

Query: 427  FXXXXXXXXXFLQSEPPSATQSPAGFLSFTSLSANVYSPG-PNSIFAIGPYAHETQLVSP 603
            F         FLQS+PPSATQSPAG LS TSLS N YSPG P SIFAIGPYAHETQLV+P
Sbjct: 99   FIAPPSSPASFLQSDPPSATQSPAGLLSLTSLSVNAYSPGGPASIFAIGPYAHETQLVTP 158

Query: 604  PVXXXXXXXXXXXXXXXXXXXLHQTTPSSPEVPFAQLLTSSLDASCRNSVASQKFPPSHY 783
            P                    +  TTPSSPEVPFAQLLTSSL+ + RNS  +QKF  SHY
Sbjct: 159  PAFSAFTTEPSTAPFTPPPESVQLTTPSSPEVPFAQLLTSSLERARRNSGTNQKFALSHY 218

Query: 784  EFQSYYLYPGSPVGHLISPSSVISNSGTSSPFLDNEFTSGGHPFLEFRTGEPPKLWSIDG 963
            EFQSY LYPGSP G LISP SVISNSGTSSPF D       +P LEFR GE PKL   + 
Sbjct: 219  EFQSYPLYPGSPGGQLISPGSVISNSGTSSPFPDR------YPILEFRMGEAPKLLGFEH 272

Query: 964  FSTRNWGPHQGSGSI--------------------------------------------- 1008
            F+TR WG   GSG++                                             
Sbjct: 273  FTTRKWGSRLGSGTVTPDGVGLGSRLGSGTVTPDGVGQGSRLGSGTVTPDGVGLRSMLGS 332

Query: 1009 ---TPDPVTPPSGDNFHLENQISEVASLANSDNGSQNDDIVIGHRVSFELTAKVGTNRMG 1179
               TPD V P S D F LENQISEVASLANS+NGS+ D+ ++ HRVSFEL+ +     + 
Sbjct: 333  GSLTPDAVGPASRDGFFLENQISEVASLANSENGSKTDENIVDHRVSFELSGEEVARCLE 392

Query: 1180 MDHLASV--------ESTAEPLLNRAIARATTERDCHCNGAENSINCHEKPSSTEINKAS 1335
               LAS         +S AE  +       T E   +    E S    EKPS        
Sbjct: 393  SKSLASCRAFSECPPDSMAEDQIKSGKMLMTDE---NLPTGETSGETPEKPS-------- 441

Query: 1336 QINKLESQQEHGQEPSLTSIGSVKEFNFVNADEETSDKPPVSSDWWANEKVVTKEAGTRN 1515
               ++E +  + +  S+T +GS+KEFNF N+ +E  DKP ++S+WWANE +  KEA   N
Sbjct: 442  --GEMEEEHCYRKHRSIT-LGSIKEFNFDNS-KEVPDKPSINSEWWANETIAGKEARPAN 497

Query: 1516 GWTFFPMIQPGVS 1554
             WTFFP++QP VS
Sbjct: 498  NWTFFPLLQPEVS 510



 Score = 38.5 bits (88), Expect(2) = e-107
 Identities = 17/22 (77%), Positives = 21/22 (95%)
 Frame = +2

Query: 107 NNNSVDTVNAAATAIIGAETRV 172
           NN+SVDT+NAAATAI+ AE+RV
Sbjct: 18  NNSSVDTINAAATAIVSAESRV 39


>ref|XP_002298027.1| predicted protein [Populus trichocarpa] gi|222845285|gb|EEE82832.1|
            predicted protein [Populus trichocarpa]
          Length = 453

 Score =  358 bits (920), Expect(2) = e-100
 Identities = 208/432 (48%), Positives = 259/432 (59%), Gaps = 1/432 (0%)
 Frame = +1

Query: 262  QKRRWGIRWSGYWCFGSHRNGKRIGHSALVPEPAVTGTAGASTGNSAHPPTVVLPFXXXX 441
            QKRRWG  WS Y CFG  ++ K+IGH+ L PEP+  G    ++ N    P V LPF    
Sbjct: 38   QKRRWGSCWSIYLCFGYQKHKKQIGHAVLFPEPSAPGNGAPASENPTQAPVVTLPFAAPP 97

Query: 442  XXXXXFLQSEPPSATQSPAGFLSFTSLSANVYSP-GPNSIFAIGPYAHETQLVSPPVXXX 618
                 F QSEPPS TQSPAG +S TS+SA++YSP GP SIFAIGPYAHETQLVSPPV   
Sbjct: 98   SSPASFFQSEPPSVTQSPAGLVSLTSISASMYSPSGPASIFAIGPYAHETQLVSPPVFST 157

Query: 619  XXXXXXXXXXXXXXXXLHQTTPSSPEVPFAQLLTSSLDASCRNSVASQKFPPSHYEFQSY 798
                            +H TTPSSPEVPFAQ L    D S RN     +FP   ++FQSY
Sbjct: 158  FTTEPSTAPFTPPPESVHLTTPSSPEVPFAQFL----DPSLRNGDTGLRFP---FDFQSY 210

Query: 799  YLYPGSPVGHLISPSSVISNSGTSSPFLDNEFTSGGHPFLEFRTGEPPKLWSIDGFSTRN 978
              +PGSPVG LISPSS IS SGTSSPF D EF  GG  F EFR GEPPKL ++D  ST  
Sbjct: 211  QFHPGSPVGQLISPSSGISGSGTSSPFPDGEFAVGGAHFPEFRIGEPPKLLNLDKLSTCE 270

Query: 979  WGPHQGSGSITPDPVTPPSGDNFHLENQISEVASLANSDNGSQNDDIVIGHRVSFELTAK 1158
            WG +QGSG++TP+ V   S  NF L  Q S+V S   S NG +N   V+ HRVSFELTA+
Sbjct: 271  WGSYQGSGALTPESVRRGS-PNFLLHRQFSDVPSRPRSGNGHKNGQ-VVNHRVSFELTAE 328

Query: 1159 VGTNRMGMDHLASVESTAEPLLNRAIARATTERDCHCNGAENSINCHEKPSSTEINKASQ 1338
              +  +      S+++  E + N   A+     + +   +  S  C    +S +  + + 
Sbjct: 329  DASRCVEEKPAFSIKTVPEYVENGTQAK----EEKNSGESIQSFECRVGVTSNDSPEMAS 384

Query: 1339 INKLESQQEHGQEPSLTSIGSVKEFNFVNADEETSDKPPVSSDWWANEKVVTKEAGTRNG 1518
             +  E+  +H ++ S+T +GSVKEFNF NADE  S KP  SS+WWAN  V+ KE  T   
Sbjct: 385  TDG-EAAPQHRKQQSIT-LGSVKEFNFDNADEGDSRKPS-SSNWWANGSVIGKEGETTKN 441

Query: 1519 WTFFPMIQPGVS 1554
            W+FFPM+Q GVS
Sbjct: 442  WSFFPMVQSGVS 453



 Score = 33.9 bits (76), Expect(2) = e-100
 Identities = 16/29 (55%), Positives = 20/29 (68%)
 Frame = +2

Query: 86  FEEMRRVNNNSVDTVNAAATAIIGAETRV 172
           F    R  NN+++T+NAAATAI  AE RV
Sbjct: 4   FNGESRAANNTLETINAAATAIASAENRV 32


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