BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00003948
         (1073 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002534138.1| Protein YIF1A, putative [Ricinus communis] g...   419   e-115
ref|XP_002268449.2| PREDICTED: protein YIF1B [Vitis vinifera]         413   e-113
emb|CBI36691.3| unnamed protein product [Vitis vinifera]              413   e-113
ref|XP_004152088.1| PREDICTED: protein YIF1B-A-like [Cucumis sat...   413   e-113
ref|NP_564367.1| integral membrane HRF1-like protein [Arabidopsi...   410   e-112

>ref|XP_002534138.1| Protein YIF1A, putative [Ricinus communis]
           gi|223525796|gb|EEF28242.1| Protein YIF1A, putative
           [Ricinus communis]
          Length = 269

 Score =  419 bits (1078), Expect = e-115
 Identities = 203/263 (77%), Positives = 218/263 (82%), Gaps = 3/263 (1%)
 Frame = +2

Query: 143 MYDNMGGMGGAP---LNPQPNPFGNAFAGASSGLIRGGLGAYGERIFGSSSEYVQSNISR 313
           MY+N+G   G P    NPQPNPFGNAF GA SGLIRGGLGAYGE+I GSSSEYVQSNISR
Sbjct: 1   MYNNVGTQPGVPRPPTNPQPNPFGNAFYGAGSGLIRGGLGAYGEKILGSSSEYVQSNISR 60

Query: 314 YFSDPQYYFQVNDQYVRNKLKVVLFPFLHRGHWTRITEPVGGRLSYKPPVYDINAPDLYI 493
           YFSDPQYYFQVNDQYVRNKLKVVLFPFLHRGHWTRITEPVGGRLSYKPP+YDINAPDLYI
Sbjct: 61  YFSDPQYYFQVNDQYVRNKLKVVLFPFLHRGHWTRITEPVGGRLSYKPPIYDINAPDLYI 120

Query: 494 PFMAFGTYVILAGFSLGLLGKFSPEALSLQFTKXXXXXXXXXXXXXXXXXXXXXXEAPLL 673
           PFMAFGTY++LAG SLGL GKFSPE L+  F K                      EAPLL
Sbjct: 121 PFMAFGTYIVLAGLSLGLNGKFSPENLNWLFVKGLLGWFMQVALLKVTLLSLGSGEAPLL 180

Query: 674 DIVAYGGYAFTGICVAVLGRILWSYSYYFLMPWTCLCMGVFLVKTMKRVLFAEVRSYDSS 853
           DIVAY GY FTG+C+AVLGRI  +YSYYFLMPW CLCMG+FLVKTMKRVLFAEVR+YDSS
Sbjct: 181 DIVAYAGYTFTGMCIAVLGRIFINYSYYFLMPWACLCMGIFLVKTMKRVLFAEVRTYDSS 240

Query: 854 RHHYLLLFMALAQFPLFFWLGSL 922
           RHHYLLLF+ALAQFPLF WLG++
Sbjct: 241 RHHYLLLFIALAQFPLFTWLGNI 263


>ref|XP_002268449.2| PREDICTED: protein YIF1B [Vitis vinifera]
          Length = 348

 Score =  413 bits (1062), Expect = e-113
 Identities = 204/260 (78%), Positives = 215/260 (82%), Gaps = 1/260 (0%)
 Frame = +2

Query: 161 GMGGAPLNPQPN-PFGNAFAGASSGLIRGGLGAYGERIFGSSSEYVQSNISRYFSDPQYY 337
           GMG A  NPQPN PFGNAF GA SGLIRGGLGAYGE+I GSSSEYVQSNISRYFSDPQYY
Sbjct: 89  GMGPAA-NPQPNNPFGNAFYGAGSGLIRGGLGAYGEKILGSSSEYVQSNISRYFSDPQYY 147

Query: 338 FQVNDQYVRNKLKVVLFPFLHRGHWTRITEPVGGRLSYKPPVYDINAPDLYIPFMAFGTY 517
           FQVND YVRNKLKVVLFPFLHRGHWTRITEPVGGRLSYKPP+YDINAPDLYIPFMAFGTY
Sbjct: 148 FQVNDHYVRNKLKVVLFPFLHRGHWTRITEPVGGRLSYKPPIYDINAPDLYIPFMAFGTY 207

Query: 518 VILAGFSLGLLGKFSPEALSLQFTKXXXXXXXXXXXXXXXXXXXXXXEAPLLDIVAYGGY 697
           VILAG SLGL GKF+PEAL+  F K                      EAPLLDIVAY GY
Sbjct: 208 VILAGLSLGLRGKFTPEALNWLFIKGLVGWCLQVSLLKVSLLSLGSGEAPLLDIVAYAGY 267

Query: 698 AFTGICVAVLGRILWSYSYYFLMPWTCLCMGVFLVKTMKRVLFAEVRSYDSSRHHYLLLF 877
            FTG+C+AV GRI WSYSYYFLMPW CLCMG+FLVKTMKRVLFAEVRSYDSSRHHYLLLF
Sbjct: 268 TFTGMCLAVFGRIAWSYSYYFLMPWACLCMGIFLVKTMKRVLFAEVRSYDSSRHHYLLLF 327

Query: 878 MALAQFPLFFWLGSLGA*FL 937
           +ALAQ PLF WLG++   +L
Sbjct: 328 IALAQLPLFIWLGNISVHWL 347


>emb|CBI36691.3| unnamed protein product [Vitis vinifera]
          Length = 337

 Score =  413 bits (1062), Expect = e-113
 Identities = 204/260 (78%), Positives = 215/260 (82%), Gaps = 1/260 (0%)
 Frame = +2

Query: 161 GMGGAPLNPQPN-PFGNAFAGASSGLIRGGLGAYGERIFGSSSEYVQSNISRYFSDPQYY 337
           GMG A  NPQPN PFGNAF GA SGLIRGGLGAYGE+I GSSSEYVQSNISRYFSDPQYY
Sbjct: 78  GMGPAA-NPQPNNPFGNAFYGAGSGLIRGGLGAYGEKILGSSSEYVQSNISRYFSDPQYY 136

Query: 338 FQVNDQYVRNKLKVVLFPFLHRGHWTRITEPVGGRLSYKPPVYDINAPDLYIPFMAFGTY 517
           FQVND YVRNKLKVVLFPFLHRGHWTRITEPVGGRLSYKPP+YDINAPDLYIPFMAFGTY
Sbjct: 137 FQVNDHYVRNKLKVVLFPFLHRGHWTRITEPVGGRLSYKPPIYDINAPDLYIPFMAFGTY 196

Query: 518 VILAGFSLGLLGKFSPEALSLQFTKXXXXXXXXXXXXXXXXXXXXXXEAPLLDIVAYGGY 697
           VILAG SLGL GKF+PEAL+  F K                      EAPLLDIVAY GY
Sbjct: 197 VILAGLSLGLRGKFTPEALNWLFIKGLVGWCLQVSLLKVSLLSLGSGEAPLLDIVAYAGY 256

Query: 698 AFTGICVAVLGRILWSYSYYFLMPWTCLCMGVFLVKTMKRVLFAEVRSYDSSRHHYLLLF 877
            FTG+C+AV GRI WSYSYYFLMPW CLCMG+FLVKTMKRVLFAEVRSYDSSRHHYLLLF
Sbjct: 257 TFTGMCLAVFGRIAWSYSYYFLMPWACLCMGIFLVKTMKRVLFAEVRSYDSSRHHYLLLF 316

Query: 878 MALAQFPLFFWLGSLGA*FL 937
           +ALAQ PLF WLG++   +L
Sbjct: 317 IALAQLPLFIWLGNISVHWL 336


>ref|XP_004152088.1| PREDICTED: protein YIF1B-A-like [Cucumis sativus]
           gi|449502274|ref|XP_004161595.1| PREDICTED: protein
           YIF1B-A-like [Cucumis sativus]
          Length = 269

 Score =  413 bits (1061), Expect = e-113
 Identities = 202/268 (75%), Positives = 219/268 (81%), Gaps = 3/268 (1%)
 Frame = +2

Query: 143 MYDNMGGMGGAPLNP---QPNPFGNAFAGASSGLIRGGLGAYGERIFGSSSEYVQSNISR 313
           MY+N+     AP  P   QPNPFGNAF GA SGLIRGGLGAYGE+IFGSSSEYVQSNISR
Sbjct: 1   MYNNVEAQPAAPKPPASSQPNPFGNAFYGAGSGLIRGGLGAYGEKIFGSSSEYVQSNISR 60

Query: 314 YFSDPQYYFQVNDQYVRNKLKVVLFPFLHRGHWTRITEPVGGRLSYKPPVYDINAPDLYI 493
           YFSDPQYYFQVNDQYVRNKLKVVLFPFLHRGHWTRIT+P+GGRLSYKPP+YDINAPDLYI
Sbjct: 61  YFSDPQYYFQVNDQYVRNKLKVVLFPFLHRGHWTRITDPIGGRLSYKPPIYDINAPDLYI 120

Query: 494 PFMAFGTYVILAGFSLGLLGKFSPEALSLQFTKXXXXXXXXXXXXXXXXXXXXXXEAPLL 673
           PFMAFGTYV+LAGFSLGL GKF+PEALS  F K                      EAPLL
Sbjct: 121 PFMAFGTYVVLAGFSLGLQGKFTPEALSWLFIKGLLGWFMQVMLLKVTLLSLGSGEAPLL 180

Query: 674 DIVAYGGYAFTGICVAVLGRILWSYSYYFLMPWTCLCMGVFLVKTMKRVLFAEVRSYDSS 853
           DIVAY GYAFTG+C+A +GRI   YSYYFLMPW  LCMG+FLVKTMKRVLFAEVR+YDSS
Sbjct: 181 DIVAYAGYAFTGLCLAAIGRISLKYSYYFLMPWMALCMGIFLVKTMKRVLFAEVRTYDSS 240

Query: 854 RHHYLLLFMALAQFPLFFWLGSLGA*FL 937
           RHHYLLLF+ALAQFPLF WLG++   +L
Sbjct: 241 RHHYLLLFIALAQFPLFTWLGNVSVNWL 268


>ref|NP_564367.1| integral membrane HRF1-like protein [Arabidopsis thaliana]
           gi|145324088|ref|NP_001077633.1| integral membrane
           HRF1-like protein [Arabidopsis thaliana]
           gi|14532658|gb|AAK64057.1| unknown protein [Arabidopsis
           thaliana] gi|21280943|gb|AAM44952.1| unknown protein
           [Arabidopsis thaliana] gi|21554340|gb|AAM63447.1|
           unknown [Arabidopsis thaliana]
           gi|332193168|gb|AEE31289.1| integral membrane HRF1-like
           protein [Arabidopsis thaliana]
           gi|332193169|gb|AEE31290.1| integral membrane HRF1-like
           protein [Arabidopsis thaliana]
          Length = 269

 Score =  410 bits (1054), Expect = e-112
 Identities = 198/268 (73%), Positives = 215/268 (80%), Gaps = 3/268 (1%)
 Frame = +2

Query: 143 MYDNMG---GMGGAPLNPQPNPFGNAFAGASSGLIRGGLGAYGERIFGSSSEYVQSNISR 313
           MY+NMG   GM   P NP+P PFGN F GA SG IRGGLGAYGERI GSSSEYVQSNISR
Sbjct: 1   MYNNMGPQPGMPRPPGNPEPGPFGNPFTGAGSGFIRGGLGAYGERILGSSSEYVQSNISR 60

Query: 314 YFSDPQYYFQVNDQYVRNKLKVVLFPFLHRGHWTRITEPVGGRLSYKPPVYDINAPDLYI 493
           YFSDPQYYFQVNDQYVRNKLKVVLFPFLHRGHWTRI+EPVGGRLSYKPP+YDINAPDLYI
Sbjct: 61  YFSDPQYYFQVNDQYVRNKLKVVLFPFLHRGHWTRISEPVGGRLSYKPPIYDINAPDLYI 120

Query: 494 PFMAFGTYVILAGFSLGLLGKFSPEALSLQFTKXXXXXXXXXXXXXXXXXXXXXXEAPLL 673
           PFMAFGTYV+LAG SLGL GKF+PEAL+  F K                      EAPLL
Sbjct: 121 PFMAFGTYVVLAGLSLGLNGKFTPEALNWLFVKGLVGWFLQVMLLKVTLLSLGSGEAPLL 180

Query: 674 DIVAYGGYAFTGICVAVLGRILWSYSYYFLMPWTCLCMGVFLVKTMKRVLFAEVRSYDSS 853
           DIVAYGGYAF G+C+A   +I+W YSYY LMPWTCLC G+FLVKTMKRVLFAEVRSYDSS
Sbjct: 181 DIVAYGGYAFAGLCLAGFAKIMWGYSYYALMPWTCLCTGIFLVKTMKRVLFAEVRSYDSS 240

Query: 854 RHHYLLLFMALAQFPLFFWLGSLGA*FL 937
           +HHYLLLF+AL QFPL  WLG++   +L
Sbjct: 241 KHHYLLLFLALVQFPLLIWLGNISVNWL 268