BLASTX nr result
ID: Coptis21_contig00003937
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00003937 (1067 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002265343.1| PREDICTED: uncharacterized protein LOC100245... 356 6e-96 ref|XP_004144551.1| PREDICTED: transmembrane emp24 domain-contai... 352 1e-94 ref|XP_002300382.1| predicted protein [Populus trichocarpa] gi|1... 343 5e-92 ref|XP_003545588.1| PREDICTED: transmembrane emp24 domain-contai... 341 2e-91 ref|XP_003618034.1| Transmembrane emp24 domain-containing protei... 340 3e-91 >ref|XP_002265343.1| PREDICTED: uncharacterized protein LOC100245903 isoform 2 [Vitis vinifera] gi|225447506|ref|XP_002265305.1| PREDICTED: uncharacterized protein LOC100245903 isoform 1 [Vitis vinifera] gi|296085048|emb|CBI28463.3| unnamed protein product [Vitis vinifera] Length = 214 Score = 356 bits (913), Expect = 6e-96 Identities = 165/202 (81%), Positives = 186/202 (92%) Frame = -1 Query: 908 VLVLAFLSSLQSVFGIRFVIDREECFSHQVQYEGDTVHVSFVVIKADAPWHYSEDGVDLV 729 ++V+ LS LQ V GIRFV+DRE+CFSH VQYEGDTVHVSFVVIKADA WHY+EDGVDLV Sbjct: 13 IVVMLLLSDLQGVVGIRFVVDREDCFSHDVQYEGDTVHVSFVVIKADASWHYAEDGVDLV 72 Query: 728 VKGPSGDQLYDSRDKTSEKFDFLVHKRGLHQFCFTNKSPYHETIDFDVHGGHFTYVDQHA 549 +KGPSGDQ++D RDKTSEKF+F+ K+GLH+FCFTNKSPY ETIDFDVH GHFTY DQHA Sbjct: 73 IKGPSGDQIHDFRDKTSEKFEFVAQKKGLHRFCFTNKSPYQETIDFDVHVGHFTYYDQHA 132 Query: 548 KDEHFNPLLEQISKLEEALYNVQFEQHWLEAQTDRQAVVNEGMSKRAIHKAMFESVVLIG 369 KDEHFNPLLEQI+KLEEALYN+QFEQHWLEAQTDRQA+VNEGMS+RA+HKAMFESV L+G Sbjct: 133 KDEHFNPLLEQIAKLEEALYNIQFEQHWLEAQTDRQAIVNEGMSQRAVHKAMFESVALVG 192 Query: 368 ASCLQVYLLKRLFERKLGTSRV 303 AS LQ+YLL+RLFERKLG SRV Sbjct: 193 ASVLQIYLLQRLFERKLGISRV 214 >ref|XP_004144551.1| PREDICTED: transmembrane emp24 domain-containing protein p24beta2-like [Cucumis sativus] Length = 214 Score = 352 bits (902), Expect = 1e-94 Identities = 167/214 (78%), Positives = 190/214 (88%), Gaps = 4/214 (1%) Frame = -1 Query: 932 MEFRSFKFVLVLAF----LSSLQSVFGIRFVIDREECFSHQVQYEGDTVHVSFVVIKADA 765 ME + +FV+++AF L SL+ GIRFVIDREECFSH VQYEGDTVHVSFVVIKAD+ Sbjct: 1 MERWAMRFVMMMAFVGVLLLSLRKSEGIRFVIDREECFSHHVQYEGDTVHVSFVVIKADS 60 Query: 764 PWHYSEDGVDLVVKGPSGDQLYDSRDKTSEKFDFLVHKRGLHQFCFTNKSPYHETIDFDV 585 PWHY +DGVDLV+KGPSG+ L+D RDKTSEK +F+ H +GLH+FCFTNKSPYHETIDFDV Sbjct: 61 PWHYGDDGVDLVIKGPSGEHLHDFRDKTSEKHEFIAHNKGLHRFCFTNKSPYHETIDFDV 120 Query: 584 HGGHFTYVDQHAKDEHFNPLLEQISKLEEALYNVQFEQHWLEAQTDRQAVVNEGMSKRAI 405 H GHF+Y +QHAKDEHFNPL++QISKLEEALYN+QFEQHWLEAQTDRQA+VNEGM KRAI Sbjct: 121 HVGHFSYHEQHAKDEHFNPLMDQISKLEEALYNIQFEQHWLEAQTDRQAIVNEGMGKRAI 180 Query: 404 HKAMFESVVLIGASCLQVYLLKRLFERKLGTSRV 303 HKAMFES L+GAS LQVYLL+RLFERKLGTSRV Sbjct: 181 HKAMFESAALVGASVLQVYLLQRLFERKLGTSRV 214 >ref|XP_002300382.1| predicted protein [Populus trichocarpa] gi|118482006|gb|ABK92934.1| unknown [Populus trichocarpa] gi|222847640|gb|EEE85187.1| predicted protein [Populus trichocarpa] Length = 213 Score = 343 bits (879), Expect = 5e-92 Identities = 158/207 (76%), Positives = 184/207 (88%) Frame = -1 Query: 923 RSFKFVLVLAFLSSLQSVFGIRFVIDREECFSHQVQYEGDTVHVSFVVIKADAPWHYSED 744 + + VL+LA LSS ++VFGIRFVIDREECFSH V+YEGDTVHVSFVV+K D+ WHYS+D Sbjct: 7 KGYFVVLLLALLSSPEAVFGIRFVIDREECFSHDVKYEGDTVHVSFVVVKVDSSWHYSDD 66 Query: 743 GVDLVVKGPSGDQLYDSRDKTSEKFDFLVHKRGLHQFCFTNKSPYHETIDFDVHGGHFTY 564 GVDLVVKGPSGDQ++D RDK SEK +F+ H++G+H+FCFTNKSPYHETIDFDVH GHF+Y Sbjct: 67 GVDLVVKGPSGDQIHDFRDKISEKIEFVAHQKGVHRFCFTNKSPYHETIDFDVHVGHFSY 126 Query: 563 VDQHAKDEHFNPLLEQISKLEEALYNVQFEQHWLEAQTDRQAVVNEGMSKRAIHKAMFES 384 D+HAKDEHF PLLEQISKLEEALYN+QFEQHWLEAQTDRQA++N+ MS+R IHKA FES Sbjct: 127 YDEHAKDEHFQPLLEQISKLEEALYNIQFEQHWLEAQTDRQAIINDAMSRRTIHKAFFES 186 Query: 383 VVLIGASCLQVYLLKRLFERKLGTSRV 303 L+ AS LQVYLL+RLFERKLG SRV Sbjct: 187 AALVAASILQVYLLRRLFERKLGMSRV 213 >ref|XP_003545588.1| PREDICTED: transmembrane emp24 domain-containing protein-like [Glycine max] Length = 212 Score = 341 bits (874), Expect = 2e-91 Identities = 160/209 (76%), Positives = 183/209 (87%), Gaps = 3/209 (1%) Frame = -1 Query: 920 SFKFVLVLAFLSSL---QSVFGIRFVIDREECFSHQVQYEGDTVHVSFVVIKADAPWHYS 750 S + LV A + +L Q GIRFVIDR+ECFSH V+YEGDTVHVSFVVIKAD+PWHY Sbjct: 4 SLRHALVFALIGALWNLQRAEGIRFVIDRDECFSHDVKYEGDTVHVSFVVIKADSPWHYG 63 Query: 749 EDGVDLVVKGPSGDQLYDSRDKTSEKFDFLVHKRGLHQFCFTNKSPYHETIDFDVHGGHF 570 ++GVDLVVKGPSG+Q+ D RDKTSEKFDF+ HK G+H+FCFTNKSPYHET+DFDVH GHF Sbjct: 64 DEGVDLVVKGPSGEQIQDFRDKTSEKFDFVAHKSGVHKFCFTNKSPYHETVDFDVHVGHF 123 Query: 569 TYVDQHAKDEHFNPLLEQISKLEEALYNVQFEQHWLEAQTDRQAVVNEGMSKRAIHKAMF 390 +Y +QHAKDEHF PLLEQI KLEEALYN+QFEQHWLEAQTDRQA+VN+ MS+RA+HKA+F Sbjct: 124 SYFEQHAKDEHFTPLLEQIGKLEEALYNIQFEQHWLEAQTDRQAIVNDAMSRRAVHKAIF 183 Query: 389 ESVVLIGASCLQVYLLKRLFERKLGTSRV 303 ES LIGAS LQVYLL+RLFERKLGTSRV Sbjct: 184 ESAALIGASALQVYLLQRLFERKLGTSRV 212 >ref|XP_003618034.1| Transmembrane emp24 domain-containing protein [Medicago truncatula] gi|355519369|gb|AET00993.1| Transmembrane emp24 domain-containing protein [Medicago truncatula] Length = 213 Score = 340 bits (873), Expect = 3e-91 Identities = 155/202 (76%), Positives = 184/202 (91%) Frame = -1 Query: 908 VLVLAFLSSLQSVFGIRFVIDREECFSHQVQYEGDTVHVSFVVIKADAPWHYSEDGVDLV 729 ++++ L + + GIRFVIDR+ECFSH V+YEGDTVHVSFVVIKAD+PWHY ++GVDLV Sbjct: 12 IVLIGMLLNWKETEGIRFVIDRDECFSHDVKYEGDTVHVSFVVIKADSPWHYGDEGVDLV 71 Query: 728 VKGPSGDQLYDSRDKTSEKFDFLVHKRGLHQFCFTNKSPYHETIDFDVHGGHFTYVDQHA 549 VKGP+G+Q+ D RDKTS+KF+F+ HK G+H+FCFTNKSPYHETIDFDVH GHF+Y +QHA Sbjct: 72 VKGPAGEQIQDFRDKTSDKFEFVAHKPGVHKFCFTNKSPYHETIDFDVHVGHFSYFEQHA 131 Query: 548 KDEHFNPLLEQISKLEEALYNVQFEQHWLEAQTDRQAVVNEGMSKRAIHKAMFESVVLIG 369 KDEHFNPLLEQI+KLEEALYN+QFEQHWLEAQTDRQA+VN+GMS+RA+HKA+FES LIG Sbjct: 132 KDEHFNPLLEQIAKLEEALYNIQFEQHWLEAQTDRQAIVNDGMSRRAVHKAIFESAALIG 191 Query: 368 ASCLQVYLLKRLFERKLGTSRV 303 AS LQVYLL+RLFERKLGTSRV Sbjct: 192 ASALQVYLLRRLFERKLGTSRV 213