BLASTX nr result

ID: Coptis21_contig00003937 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00003937
         (1067 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265343.1| PREDICTED: uncharacterized protein LOC100245...   356   6e-96
ref|XP_004144551.1| PREDICTED: transmembrane emp24 domain-contai...   352   1e-94
ref|XP_002300382.1| predicted protein [Populus trichocarpa] gi|1...   343   5e-92
ref|XP_003545588.1| PREDICTED: transmembrane emp24 domain-contai...   341   2e-91
ref|XP_003618034.1| Transmembrane emp24 domain-containing protei...   340   3e-91

>ref|XP_002265343.1| PREDICTED: uncharacterized protein LOC100245903 isoform 2 [Vitis
           vinifera] gi|225447506|ref|XP_002265305.1| PREDICTED:
           uncharacterized protein LOC100245903 isoform 1 [Vitis
           vinifera] gi|296085048|emb|CBI28463.3| unnamed protein
           product [Vitis vinifera]
          Length = 214

 Score =  356 bits (913), Expect = 6e-96
 Identities = 165/202 (81%), Positives = 186/202 (92%)
 Frame = -1

Query: 908 VLVLAFLSSLQSVFGIRFVIDREECFSHQVQYEGDTVHVSFVVIKADAPWHYSEDGVDLV 729
           ++V+  LS LQ V GIRFV+DRE+CFSH VQYEGDTVHVSFVVIKADA WHY+EDGVDLV
Sbjct: 13  IVVMLLLSDLQGVVGIRFVVDREDCFSHDVQYEGDTVHVSFVVIKADASWHYAEDGVDLV 72

Query: 728 VKGPSGDQLYDSRDKTSEKFDFLVHKRGLHQFCFTNKSPYHETIDFDVHGGHFTYVDQHA 549
           +KGPSGDQ++D RDKTSEKF+F+  K+GLH+FCFTNKSPY ETIDFDVH GHFTY DQHA
Sbjct: 73  IKGPSGDQIHDFRDKTSEKFEFVAQKKGLHRFCFTNKSPYQETIDFDVHVGHFTYYDQHA 132

Query: 548 KDEHFNPLLEQISKLEEALYNVQFEQHWLEAQTDRQAVVNEGMSKRAIHKAMFESVVLIG 369
           KDEHFNPLLEQI+KLEEALYN+QFEQHWLEAQTDRQA+VNEGMS+RA+HKAMFESV L+G
Sbjct: 133 KDEHFNPLLEQIAKLEEALYNIQFEQHWLEAQTDRQAIVNEGMSQRAVHKAMFESVALVG 192

Query: 368 ASCLQVYLLKRLFERKLGTSRV 303
           AS LQ+YLL+RLFERKLG SRV
Sbjct: 193 ASVLQIYLLQRLFERKLGISRV 214


>ref|XP_004144551.1| PREDICTED: transmembrane emp24 domain-containing protein
           p24beta2-like [Cucumis sativus]
          Length = 214

 Score =  352 bits (902), Expect = 1e-94
 Identities = 167/214 (78%), Positives = 190/214 (88%), Gaps = 4/214 (1%)
 Frame = -1

Query: 932 MEFRSFKFVLVLAF----LSSLQSVFGIRFVIDREECFSHQVQYEGDTVHVSFVVIKADA 765
           ME  + +FV+++AF    L SL+   GIRFVIDREECFSH VQYEGDTVHVSFVVIKAD+
Sbjct: 1   MERWAMRFVMMMAFVGVLLLSLRKSEGIRFVIDREECFSHHVQYEGDTVHVSFVVIKADS 60

Query: 764 PWHYSEDGVDLVVKGPSGDQLYDSRDKTSEKFDFLVHKRGLHQFCFTNKSPYHETIDFDV 585
           PWHY +DGVDLV+KGPSG+ L+D RDKTSEK +F+ H +GLH+FCFTNKSPYHETIDFDV
Sbjct: 61  PWHYGDDGVDLVIKGPSGEHLHDFRDKTSEKHEFIAHNKGLHRFCFTNKSPYHETIDFDV 120

Query: 584 HGGHFTYVDQHAKDEHFNPLLEQISKLEEALYNVQFEQHWLEAQTDRQAVVNEGMSKRAI 405
           H GHF+Y +QHAKDEHFNPL++QISKLEEALYN+QFEQHWLEAQTDRQA+VNEGM KRAI
Sbjct: 121 HVGHFSYHEQHAKDEHFNPLMDQISKLEEALYNIQFEQHWLEAQTDRQAIVNEGMGKRAI 180

Query: 404 HKAMFESVVLIGASCLQVYLLKRLFERKLGTSRV 303
           HKAMFES  L+GAS LQVYLL+RLFERKLGTSRV
Sbjct: 181 HKAMFESAALVGASVLQVYLLQRLFERKLGTSRV 214


>ref|XP_002300382.1| predicted protein [Populus trichocarpa] gi|118482006|gb|ABK92934.1|
           unknown [Populus trichocarpa]
           gi|222847640|gb|EEE85187.1| predicted protein [Populus
           trichocarpa]
          Length = 213

 Score =  343 bits (879), Expect = 5e-92
 Identities = 158/207 (76%), Positives = 184/207 (88%)
 Frame = -1

Query: 923 RSFKFVLVLAFLSSLQSVFGIRFVIDREECFSHQVQYEGDTVHVSFVVIKADAPWHYSED 744
           + +  VL+LA LSS ++VFGIRFVIDREECFSH V+YEGDTVHVSFVV+K D+ WHYS+D
Sbjct: 7   KGYFVVLLLALLSSPEAVFGIRFVIDREECFSHDVKYEGDTVHVSFVVVKVDSSWHYSDD 66

Query: 743 GVDLVVKGPSGDQLYDSRDKTSEKFDFLVHKRGLHQFCFTNKSPYHETIDFDVHGGHFTY 564
           GVDLVVKGPSGDQ++D RDK SEK +F+ H++G+H+FCFTNKSPYHETIDFDVH GHF+Y
Sbjct: 67  GVDLVVKGPSGDQIHDFRDKISEKIEFVAHQKGVHRFCFTNKSPYHETIDFDVHVGHFSY 126

Query: 563 VDQHAKDEHFNPLLEQISKLEEALYNVQFEQHWLEAQTDRQAVVNEGMSKRAIHKAMFES 384
            D+HAKDEHF PLLEQISKLEEALYN+QFEQHWLEAQTDRQA++N+ MS+R IHKA FES
Sbjct: 127 YDEHAKDEHFQPLLEQISKLEEALYNIQFEQHWLEAQTDRQAIINDAMSRRTIHKAFFES 186

Query: 383 VVLIGASCLQVYLLKRLFERKLGTSRV 303
             L+ AS LQVYLL+RLFERKLG SRV
Sbjct: 187 AALVAASILQVYLLRRLFERKLGMSRV 213


>ref|XP_003545588.1| PREDICTED: transmembrane emp24 domain-containing protein-like
           [Glycine max]
          Length = 212

 Score =  341 bits (874), Expect = 2e-91
 Identities = 160/209 (76%), Positives = 183/209 (87%), Gaps = 3/209 (1%)
 Frame = -1

Query: 920 SFKFVLVLAFLSSL---QSVFGIRFVIDREECFSHQVQYEGDTVHVSFVVIKADAPWHYS 750
           S +  LV A + +L   Q   GIRFVIDR+ECFSH V+YEGDTVHVSFVVIKAD+PWHY 
Sbjct: 4   SLRHALVFALIGALWNLQRAEGIRFVIDRDECFSHDVKYEGDTVHVSFVVIKADSPWHYG 63

Query: 749 EDGVDLVVKGPSGDQLYDSRDKTSEKFDFLVHKRGLHQFCFTNKSPYHETIDFDVHGGHF 570
           ++GVDLVVKGPSG+Q+ D RDKTSEKFDF+ HK G+H+FCFTNKSPYHET+DFDVH GHF
Sbjct: 64  DEGVDLVVKGPSGEQIQDFRDKTSEKFDFVAHKSGVHKFCFTNKSPYHETVDFDVHVGHF 123

Query: 569 TYVDQHAKDEHFNPLLEQISKLEEALYNVQFEQHWLEAQTDRQAVVNEGMSKRAIHKAMF 390
           +Y +QHAKDEHF PLLEQI KLEEALYN+QFEQHWLEAQTDRQA+VN+ MS+RA+HKA+F
Sbjct: 124 SYFEQHAKDEHFTPLLEQIGKLEEALYNIQFEQHWLEAQTDRQAIVNDAMSRRAVHKAIF 183

Query: 389 ESVVLIGASCLQVYLLKRLFERKLGTSRV 303
           ES  LIGAS LQVYLL+RLFERKLGTSRV
Sbjct: 184 ESAALIGASALQVYLLQRLFERKLGTSRV 212


>ref|XP_003618034.1| Transmembrane emp24 domain-containing protein [Medicago truncatula]
           gi|355519369|gb|AET00993.1| Transmembrane emp24
           domain-containing protein [Medicago truncatula]
          Length = 213

 Score =  340 bits (873), Expect = 3e-91
 Identities = 155/202 (76%), Positives = 184/202 (91%)
 Frame = -1

Query: 908 VLVLAFLSSLQSVFGIRFVIDREECFSHQVQYEGDTVHVSFVVIKADAPWHYSEDGVDLV 729
           ++++  L + +   GIRFVIDR+ECFSH V+YEGDTVHVSFVVIKAD+PWHY ++GVDLV
Sbjct: 12  IVLIGMLLNWKETEGIRFVIDRDECFSHDVKYEGDTVHVSFVVIKADSPWHYGDEGVDLV 71

Query: 728 VKGPSGDQLYDSRDKTSEKFDFLVHKRGLHQFCFTNKSPYHETIDFDVHGGHFTYVDQHA 549
           VKGP+G+Q+ D RDKTS+KF+F+ HK G+H+FCFTNKSPYHETIDFDVH GHF+Y +QHA
Sbjct: 72  VKGPAGEQIQDFRDKTSDKFEFVAHKPGVHKFCFTNKSPYHETIDFDVHVGHFSYFEQHA 131

Query: 548 KDEHFNPLLEQISKLEEALYNVQFEQHWLEAQTDRQAVVNEGMSKRAIHKAMFESVVLIG 369
           KDEHFNPLLEQI+KLEEALYN+QFEQHWLEAQTDRQA+VN+GMS+RA+HKA+FES  LIG
Sbjct: 132 KDEHFNPLLEQIAKLEEALYNIQFEQHWLEAQTDRQAIVNDGMSRRAVHKAIFESAALIG 191

Query: 368 ASCLQVYLLKRLFERKLGTSRV 303
           AS LQVYLL+RLFERKLGTSRV
Sbjct: 192 ASALQVYLLRRLFERKLGTSRV 213


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