BLASTX nr result

ID: Coptis21_contig00003923 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00003923
         (1237 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_564615.3| Peroxisomal membrane 22 kDa (Mpv17/PMP22) famil...   147   4e-33
ref|NP_564616.1| Peroxisomal membrane 22 kDa (Mpv17/PMP22) famil...   147   4e-33
ref|XP_002317517.1| predicted protein [Populus trichocarpa] gi|2...   147   7e-33
ref|XP_003543260.1| PREDICTED: uncharacterized protein LOC100786...   143   8e-32
ref|XP_002329153.1| predicted protein [Populus trichocarpa] gi|2...   143   8e-32

>ref|NP_564615.3| Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein [Arabidopsis
            thaliana] gi|12324641|gb|AAG52277.1|AC019018_14 unknown
            protein; 54928-56750 [Arabidopsis thaliana]
            gi|14326545|gb|AAK60317.1|AF385726_1 At1g52870/F14G24_14
            [Arabidopsis thaliana] gi|25090145|gb|AAN72239.1|
            At1g52870/F14G24_14 [Arabidopsis thaliana]
            gi|332194741|gb|AEE32862.1| Peroxisomal membrane 22 kDa
            (Mpv17/PMP22) family protein [Arabidopsis thaliana]
          Length = 366

 Score =  147 bits (372), Expect = 4e-33
 Identities = 65/80 (81%), Positives = 77/80 (96%)
 Frame = +3

Query: 924  LVNRTINASIVLAAGTFALTRLLSIDHDYWHGWTFFEILRYAPEHNWIAYEEALKSNPVL 1103
            +++RTINA+IVLAAG++A+T+LL+IDHDYWHGWT FEILRYAP+HNWIAYEEALK NPVL
Sbjct: 124  MIDRTINATIVLAAGSYAITKLLTIDHDYWHGWTLFEILRYAPQHNWIAYEEALKQNPVL 183

Query: 1104 AKMVISGVVYSLGDWIAQVW 1163
            AKMVISGVVYS+GDWIAQ +
Sbjct: 184  AKMVISGVVYSVGDWIAQCY 203


>ref|NP_564616.1| Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein [Arabidopsis
            thaliana] gi|21537291|gb|AAM61632.1| unknown [Arabidopsis
            thaliana] gi|332194740|gb|AEE32861.1| Peroxisomal
            membrane 22 kDa (Mpv17/PMP22) family protein [Arabidopsis
            thaliana]
          Length = 306

 Score =  147 bits (372), Expect = 4e-33
 Identities = 65/80 (81%), Positives = 77/80 (96%)
 Frame = +3

Query: 924  LVNRTINASIVLAAGTFALTRLLSIDHDYWHGWTFFEILRYAPEHNWIAYEEALKSNPVL 1103
            +++RTINA+IVLAAG++A+T+LL+IDHDYWHGWT FEILRYAP+HNWIAYEEALK NPVL
Sbjct: 124  MIDRTINATIVLAAGSYAITKLLTIDHDYWHGWTLFEILRYAPQHNWIAYEEALKQNPVL 183

Query: 1104 AKMVISGVVYSLGDWIAQVW 1163
            AKMVISGVVYS+GDWIAQ +
Sbjct: 184  AKMVISGVVYSVGDWIAQCY 203


>ref|XP_002317517.1| predicted protein [Populus trichocarpa] gi|222860582|gb|EEE98129.1|
            predicted protein [Populus trichocarpa]
          Length = 240

 Score =  147 bits (370), Expect = 7e-33
 Identities = 65/80 (81%), Positives = 77/80 (96%)
 Frame = +3

Query: 924  LVNRTINASIVLAAGTFALTRLLSIDHDYWHGWTFFEILRYAPEHNWIAYEEALKSNPVL 1103
            L++RTINA+IVLAAGT+A+T+LL+IDHDYWHGWT FEILRYAP+HNW AYEEALK+NPVL
Sbjct: 5    LIDRTINATIVLAAGTYAITKLLTIDHDYWHGWTLFEILRYAPQHNWSAYEEALKTNPVL 64

Query: 1104 AKMVISGVVYSLGDWIAQVW 1163
            AKM+ISGVVYS+GDWIAQ +
Sbjct: 65   AKMMISGVVYSVGDWIAQCY 84


>ref|XP_003543260.1| PREDICTED: uncharacterized protein LOC100786706 [Glycine max]
          Length = 376

 Score =  143 bits (361), Expect = 8e-32
 Identities = 64/78 (82%), Positives = 75/78 (96%)
 Frame = +3

Query: 924  LVNRTINASIVLAAGTFALTRLLSIDHDYWHGWTFFEILRYAPEHNWIAYEEALKSNPVL 1103
            L++RTINA+IVLAAGTFA+T+LL+ID DYWHGWT +EILRYAP+HNW AYEEALK+NPVL
Sbjct: 134  LIDRTINATIVLAAGTFAVTKLLTIDSDYWHGWTLYEILRYAPQHNWSAYEEALKTNPVL 193

Query: 1104 AKMVISGVVYSLGDWIAQ 1157
            AKM+ISG+VYSLGDWIAQ
Sbjct: 194  AKMMISGIVYSLGDWIAQ 211


>ref|XP_002329153.1| predicted protein [Populus trichocarpa] gi|222869822|gb|EEF06953.1|
            predicted protein [Populus trichocarpa]
          Length = 238

 Score =  143 bits (361), Expect = 8e-32
 Identities = 63/80 (78%), Positives = 75/80 (93%)
 Frame = +3

Query: 924  LVNRTINASIVLAAGTFALTRLLSIDHDYWHGWTFFEILRYAPEHNWIAYEEALKSNPVL 1103
            L++RTINA IVL AGT+A+T+LL+IDH+YWHGWT FEILRYAP+HNW AYEEALK+NPVL
Sbjct: 5    LIDRTINAMIVLGAGTYAITKLLTIDHNYWHGWTLFEILRYAPQHNWSAYEEALKTNPVL 64

Query: 1104 AKMVISGVVYSLGDWIAQVW 1163
            AKM+ISG+VYSLGDWIAQ +
Sbjct: 65   AKMMISGIVYSLGDWIAQCY 84


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