BLASTX nr result

ID: Coptis21_contig00003918 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00003918
         (2689 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272184.1| PREDICTED: uncharacterized protein LOC100251...   300   1e-78
ref|XP_003535789.1| PREDICTED: uncharacterized protein LOC100775...   282   4e-73
ref|XP_003556561.1| PREDICTED: uncharacterized protein LOC100810...   281   6e-73
ref|NP_197490.1| putative PRLI-interacting factor [Arabidopsis t...   266   2e-68
gb|AAG31649.1| PRLI-interacting factor A [Arabidopsis thaliana]       265   4e-68

>ref|XP_002272184.1| PREDICTED: uncharacterized protein LOC100251191 [Vitis vinifera]
            gi|147833063|emb|CAN66249.1| hypothetical protein
            VITISV_033019 [Vitis vinifera]
          Length = 318

 Score =  300 bits (768), Expect = 1e-78
 Identities = 169/304 (55%), Positives = 197/304 (64%), Gaps = 5/304 (1%)
 Frame = +3

Query: 381  KFKSNNNPRQFMFAPGAVSKPGGGRSXXXXXXXXXXXXXXXXXXXXIAISGR-GGYEPPT 557
            KF+++  P   +FA  A +KPG G                       A++G  GGY PP 
Sbjct: 34   KFQASQRP---VFA--ATAKPGRGNWKGKKSDKRKEIRRKDPLGLGTAVAGGVGGYMPPN 88

Query: 558  LHELQSQNRMKARRFYPKKKFXXXXXXXXXXXXXRFGPFAPLAPRNTTSFLIRAKKQGGI 737
            L+ELQSQNR+KARRFYPKKKF                 FAP APRNTTSF+IRAKK GGI
Sbjct: 89   LNELQSQNRLKARRFYPKKKFNNR--------------FAPFAPRNTTSFIIRAKKSGGI 134

Query: 738  ASLVSPCPVTPAVLPTPIFSPSREVLVDMAKEEWGVDGYGSMNGLIRLRSPGNEIQDGXX 917
            ASLVSPCPVTPA+LPTPIFSPSREVLVDMAKEEWGVDGYGSM GLIRLRSPG+E +D   
Sbjct: 135  ASLVSPCPVTPAILPTPIFSPSREVLVDMAKEEWGVDGYGSMKGLIRLRSPGHEARD--- 191

Query: 918  XXXXXXXXXXXXXXXXXXXXXXXXLDHDLSRFEMIYPNFADENGNLLEHPMDDQDMHIAQ 1097
                                    LDHDLSRFEMIYPN +DE  NLLE+ +DDQD HIAQ
Sbjct: 192  -DEEEEDGGSSDSDVEEHVEVERRLDHDLSRFEMIYPNCSDEQTNLLENRVDDQDTHIAQ 250

Query: 1098 LEEENLTLKERLFLMEREMVDLRMRLQCLETES----RGNKEHKDGSLENEGEGGINKDE 1265
            LEEENLTLKERLFLMERE+ DLR R+ CLET+       N+E  + + +NEG G +  ++
Sbjct: 251  LEEENLTLKERLFLMERELADLRRRVHCLETDGGRLRENNEEASENASDNEGGGDVCSEK 310

Query: 1266 NMGD 1277
            ++GD
Sbjct: 311  SVGD 314


>ref|XP_003535789.1| PREDICTED: uncharacterized protein LOC100775775 [Glycine max]
          Length = 513

 Score =  282 bits (721), Expect = 4e-73
 Identities = 155/248 (62%), Positives = 171/248 (68%), Gaps = 4/248 (1%)
 Frame = +3

Query: 519  IAISGRGGYEPPTLHELQSQNRMKARRFYPKKKFXXXXXXXXXXXXXRFGPFAPLAPRNT 698
            I+ SG  GY+PPTLHELQSQNR+KAR+FYPKKKF                 FAP APRNT
Sbjct: 116  ISNSGVVGYQPPTLHELQSQNRLKARKFYPKKKFNNR--------------FAPYAPRNT 161

Query: 699  TSFLIRAKKQGGIASLVSPCPVTPAVLPTPIFSPSREVLVDMAKEEWGVDGYGSMNGLIR 878
            TSF+IRAKK GGIASLVSPCPVTPAVLPTPI SPSREVL DMAKEEWGVDGYGSM GLIR
Sbjct: 162  TSFIIRAKKSGGIASLVSPCPVTPAVLPTPILSPSREVLGDMAKEEWGVDGYGSMKGLIR 221

Query: 879  LRSPGNEIQDGXXXXXXXXXXXXXXXXXXXXXXXXXXLDHDLSRFEMIYPNFADENGNLL 1058
            LRSPGNE                              LDHDLSRFEMIYPN+  E  N+L
Sbjct: 222  LRSPGNEAD--VHDYEDEEDGGSSESDVEEHVEVERRLDHDLSRFEMIYPNYGGEYNNVL 279

Query: 1059 EHPMDDQDMHIAQLEEENLTLKERLFLMEREMVDLRMRLQCLETESRG----NKEHKDGS 1226
            E+ +DDQD HIAQLEEENLTLKERLFLMERE+ DLR RL  LE +++     N+E  +  
Sbjct: 280  ENRVDDQDSHIAQLEEENLTLKERLFLMERELGDLRRRLLFLERQNQAVEDVNEEVVENG 339

Query: 1227 LENEGEGG 1250
             +NE EGG
Sbjct: 340  SDNESEGG 347


>ref|XP_003556561.1| PREDICTED: uncharacterized protein LOC100810934 [Glycine max]
          Length = 523

 Score =  281 bits (719), Expect = 6e-73
 Identities = 155/248 (62%), Positives = 171/248 (68%), Gaps = 4/248 (1%)
 Frame = +3

Query: 519  IAISGRGGYEPPTLHELQSQNRMKARRFYPKKKFXXXXXXXXXXXXXRFGPFAPLAPRNT 698
            I+ SG  GY+PPTLHELQSQNR+KAR+FYPKKKF                 FAP APRNT
Sbjct: 126  ISNSGVVGYQPPTLHELQSQNRLKARKFYPKKKFNNR--------------FAPYAPRNT 171

Query: 699  TSFLIRAKKQGGIASLVSPCPVTPAVLPTPIFSPSREVLVDMAKEEWGVDGYGSMNGLIR 878
            TSF+IRAKK GGIASLVSPCPVTPAVLPTPI SPSREVL DMAKEEWGVDGYGSM GLIR
Sbjct: 172  TSFIIRAKKSGGIASLVSPCPVTPAVLPTPILSPSREVLGDMAKEEWGVDGYGSMKGLIR 231

Query: 879  LRSPGNEIQDGXXXXXXXXXXXXXXXXXXXXXXXXXXLDHDLSRFEMIYPNFADENGNLL 1058
            LRSPGNE                              LDHDLSRFEMIYPN+  E  N+L
Sbjct: 232  LRSPGNEAD--VHDYEDEEDGGSSESDVEEHVEVERRLDHDLSRFEMIYPNYGVEYNNVL 289

Query: 1059 EHPMDDQDMHIAQLEEENLTLKERLFLMEREMVDLRMRLQCLETESRG----NKEHKDGS 1226
            E+ +DDQD HIAQLEEENLTLKERLFLMERE+ DLR RL  LE +++     N+E  +  
Sbjct: 290  ENRVDDQDSHIAQLEEENLTLKERLFLMERELGDLRRRLLFLERQNQAVEDVNEEVVENG 349

Query: 1227 LENEGEGG 1250
             +NE EGG
Sbjct: 350  SDNESEGG 357


>ref|NP_197490.1| putative PRLI-interacting factor [Arabidopsis thaliana]
            gi|222422845|dbj|BAH19409.1| AT5G19900 [Arabidopsis
            thaliana] gi|332005380|gb|AED92763.1| putative
            PRLI-interacting factor [Arabidopsis thaliana]
          Length = 494

 Score =  266 bits (680), Expect = 2e-68
 Identities = 143/239 (59%), Positives = 164/239 (68%), Gaps = 1/239 (0%)
 Frame = +3

Query: 531  GRGGYEPPTLHELQSQNRMKARRFYPKKKFXXXXXXXXXXXXXRFGPFAPLAPRNTTSFL 710
            G GGY+PPTL+ELQSQNR+K R+FYPKKK+                 + P APRNTTSF+
Sbjct: 148  GAGGYKPPTLNELQSQNRLKTRKFYPKKKYGNR--------------YVPYAPRNTTSFI 193

Query: 711  IRAKKQGGIASLVSPCPVTPAVLPTPIFSPSREVLVDMAKEEWGVDGYGSMNGLIRLRSP 890
            IRAKK GGIA LVSPCPVTPAVLPTP+FSPSREVL DMAKEEWGVDGYGSM GLIRLR+ 
Sbjct: 194  IRAKKSGGIAELVSPCPVTPAVLPTPMFSPSREVLGDMAKEEWGVDGYGSMKGLIRLRAD 253

Query: 891  GNEIQDGXXXXXXXXXXXXXXXXXXXXXXXXXXLDHDLSRFEMIYPNF-ADENGNLLEHP 1067
            GNE++                            LDHDLSRFEMIYPN+   E  N+LE+ 
Sbjct: 254  GNELE--PYEEDDEDEGGSSESDVEEHVEVERRLDHDLSRFEMIYPNYGGSEYNNVLENR 311

Query: 1068 MDDQDMHIAQLEEENLTLKERLFLMEREMVDLRMRLQCLETESRGNKEHKDGSLENEGE 1244
            +DDQD HIAQLEEENLTLKERLFLMERE+ D+R RLQ LE      ++  +  +ENE E
Sbjct: 312  VDDQDSHIAQLEEENLTLKERLFLMERELGDMRRRLQYLERRDMVAQDANEEVVENESE 370


>gb|AAG31649.1| PRLI-interacting factor A [Arabidopsis thaliana]
          Length = 485

 Score =  265 bits (678), Expect = 4e-68
 Identities = 143/239 (59%), Positives = 163/239 (68%), Gaps = 1/239 (0%)
 Frame = +3

Query: 531  GRGGYEPPTLHELQSQNRMKARRFYPKKKFXXXXXXXXXXXXXRFGPFAPLAPRNTTSFL 710
            G GGY+PPTL+ELQSQNR+K R+FYPKKK+                 + P APRNTTSF+
Sbjct: 139  GAGGYKPPTLNELQSQNRLKTRKFYPKKKYGNR--------------YVPYAPRNTTSFI 184

Query: 711  IRAKKQGGIASLVSPCPVTPAVLPTPIFSPSREVLVDMAKEEWGVDGYGSMNGLIRLRSP 890
            IRAKK GGIA LVSPCPVTPAVLPTP+FSPSREVL DMAKEEWGVDGYGSM GLIRLR+ 
Sbjct: 185  IRAKKSGGIAELVSPCPVTPAVLPTPMFSPSREVLGDMAKEEWGVDGYGSMKGLIRLRAD 244

Query: 891  GNEIQDGXXXXXXXXXXXXXXXXXXXXXXXXXXLDHDLSRFEMIYPNF-ADENGNLLEHP 1067
            GNE++                            LDHDLSRFEMIYPN+   E  N+LE+ 
Sbjct: 245  GNELE--PYEEDDEDEGGSSESDVEEHVEVERRLDHDLSRFEMIYPNYGGSEYNNVLENR 302

Query: 1068 MDDQDMHIAQLEEENLTLKERLFLMEREMVDLRMRLQCLETESRGNKEHKDGSLENEGE 1244
            +DDQD HIAQLEEENLTLKERLFLMERE+ D+R RLQ LE      +   +  +ENE E
Sbjct: 303  VDDQDSHIAQLEEENLTLKERLFLMERELGDMRRRLQYLERRDMVAQNANEEVVENESE 361


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