BLASTX nr result
ID: Coptis21_contig00003907
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis21_contig00003907
(1449 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002304824.1| predicted protein [Populus trichocarpa] gi|2... 110 9e-22
ref|XP_003598371.1| Serine/threonine protein kinase ATM [Medicag... 105 2e-20
ref|XP_002525583.1| hypothetical protein RCOM_0622510 [Ricinus c... 105 4e-20
ref|XP_003553721.1| PREDICTED: uncharacterized protein LOC100805... 62 4e-07
ref|NP_187194.1| PWWP domain-containing protein [Arabidopsis tha... 60 2e-06
>ref|XP_002304824.1| predicted protein [Populus trichocarpa] gi|222842256|gb|EEE79803.1|
predicted protein [Populus trichocarpa]
Length = 926
Score = 110 bits (275), Expect = 9e-22
Identities = 75/204 (36%), Positives = 107/204 (52%)
Frame = +1
Query: 151 NSSKKELSLVIESGGSSEGNGRLSQLAVDISINSEQPNTFYPLNILNTSHSPVVSHASSR 330
N++ E S + SSEG+ S+N+E+ NI TS P S S +
Sbjct: 751 NATSVETSRRVRMISSSEGS----------SMNNER-------NIPGTSDQPFKSKVSQQ 793
Query: 331 NAQFQSSKTDIKAECFTTLNMMFPKNFKLPSKDDLVKRFRSFGPLDSSETKVYSNMGSAQ 510
A+ + ++ +L+M FPK+F LPSK DL+++F FG +D +TKV+ MGSAQ
Sbjct: 794 PAESTFTYSN-------SLHMKFPKDFNLPSKMDLIRKFSRFGRVDPLKTKVFQVMGSAQ 846
Query: 511 VVFLHHFDAKAAWHCAKTKKIFTGGADIRFWLGRQGHSRRGTNNIPNPSSFPTTGASISN 690
VVF DA AA+ AK K G A + +WL R G RRG N + SS SN
Sbjct: 847 VVFFEELDAVAAYQYAKRKNNLYGVATVLYWLDRSGQKRRGPNFLSPSSS--------SN 898
Query: 691 MKSCLGVSNPQGKKDSTKPHRVKF 762
+KS L S +GK+D+ + +V+F
Sbjct: 899 LKSSLKKSGRRGKEDNKRTRKVRF 922
>ref|XP_003598371.1| Serine/threonine protein kinase ATM [Medicago truncatula]
gi|355487419|gb|AES68622.1| Serine/threonine protein
kinase ATM [Medicago truncatula]
Length = 682
Score = 105 bits (263), Expect = 2e-20
Identities = 74/204 (36%), Positives = 106/204 (51%)
Frame = +1
Query: 145 EVNSSKKELSLVIESGGSSEGNGRLSQLAVDISINSEQPNTFYPLNILNTSHSPVVSHAS 324
E N+S ++ V+ S S DISI +P L + SP++ +
Sbjct: 468 EANASATKVKSVLRSSSSVYQERLQRSCDGDISITPLKPKESARLKSFSGDRSPIIFSSK 527
Query: 325 SRNAQFQSSKTDIKAECFTTLNMMFPKNFKLPSKDDLVKRFRSFGPLDSSETKVYSNMGS 504
R + S+T + C LNM FPKNF LPSK+ L+K+F FG +DSS T+V+ GS
Sbjct: 528 VR----EQSETHVPI-CSKFLNMKFPKNFNLPSKEHLIKKFSVFGTVDSSNTRVFCYTGS 582
Query: 505 AQVVFLHHFDAKAAWHCAKTKKIFTGGADIRFWLGRQGHSRRGTNNIPNPSSFPTTGASI 684
A+V F DA AA+ AK +K+ G A+IRFWL H RR N+ + P+ +
Sbjct: 583 ARVAFFKESDAVAAYQFAK-RKVQFGEANIRFWLDPFEHKRRKLKNLYH--VHPSAKLTG 639
Query: 685 SNMKSCLGVSNPQGKKDSTKPHRV 756
S +KSCL SN K+++ K R+
Sbjct: 640 SPLKSCLKKSNSL-KQENIKKRRM 662
>ref|XP_002525583.1| hypothetical protein RCOM_0622510 [Ricinus communis]
gi|223535162|gb|EEF36842.1| hypothetical protein
RCOM_0622510 [Ricinus communis]
Length = 701
Score = 105 bits (261), Expect = 4e-20
Identities = 62/160 (38%), Positives = 90/160 (56%), Gaps = 1/160 (0%)
Frame = +1
Query: 298 HSPVVSHASSRNAQFQSSKTDIKAECFTTLNMMFPKNFKLPSKDDLVKRFRSFGPLDSSE 477
HS V S AS + Q S ++ + L+M FP++F LPS+ DL+++F FG +DS
Sbjct: 553 HSFVTSDASFKLKVVQQSAIGALSD-YQYLHMKFPRDFSLPSQKDLIRKFSRFGKVDSLR 611
Query: 478 TKVYSNMGSAQVVFLHHFDAKAAWHCAKTKKIFTGGADIRFWLGRQGHSRRGTNNIPNPS 657
TK+++ +GSAQVVFLHH DA A+ K KK G A I FWL RRG+ +
Sbjct: 612 TKIFTRLGSAQVVFLHHLDAVTAYQYLKRKKNLFGEAKILFWLDPYEKKRRGSKFV---- 667
Query: 658 SFPTTGASISNMKSCLGVSN-PQGKKDSTKPHRVKFLSDS 774
S+ N+KSCL S+ G++D +V+FL ++
Sbjct: 668 ------VSLPNLKSCLKKSDRKHGQEDKKHTKKVRFLMET 701
>ref|XP_003553721.1| PREDICTED: uncharacterized protein LOC100805944 [Glycine max]
Length = 1075
Score = 62.0 bits (149), Expect = 4e-07
Identities = 39/108 (36%), Positives = 58/108 (53%), Gaps = 3/108 (2%)
Frame = +1
Query: 310 VSHASSRNAQFQSSK-TDIKAECF--TTLNMMFPKNFKLPSKDDLVKRFRSFGPLDSSET 480
+S A S+ + +S+K D A+ T L + FP LPS +L RF FGP+D S
Sbjct: 762 MSQAPSKLVKLESNKKVDCPAKAVEPTILMIKFPPETSLPSIAELKARFARFGPMDQSGF 821
Query: 481 KVYSNMGSAQVVFLHHFDAKAAWHCAKTKKIFTGGADIRFWLGRQGHS 624
+V+ N + +VVFLH DA+AA+ + + G +RF+L G S
Sbjct: 822 RVFWNSSTCRVVFLHKVDAQAAYKYSVGSQSLFGSVGVRFFLREFGDS 869
>ref|NP_187194.1| PWWP domain-containing protein [Arabidopsis thaliana]
gi|7596768|gb|AAF64539.1| hypothetical protein
[Arabidopsis thaliana] gi|225898619|dbj|BAH30440.1|
hypothetical protein [Arabidopsis thaliana]
gi|332640719|gb|AEE74240.1| PWWP domain-containing
protein [Arabidopsis thaliana]
Length = 965
Score = 59.7 bits (143), Expect = 2e-06
Identities = 62/226 (27%), Positives = 87/226 (38%), Gaps = 33/226 (14%)
Frame = +1
Query: 379 TTLNMMFPKNFKLPSKDDLVKRFRSFGPLDSSETKVYSNMGSAQVVFLHHFDAKAAWHCA 558
T L MMFP LPS D L RF FG LD S +V +V FL+ DA+ A
Sbjct: 743 TMLVMMFPPGESLPSIDLLKARFGRFGQLDQSAIRVSWKSSICRVGFLYKLDAQTALRYV 802
Query: 559 KTKKIFTGGADIRFWLGRQGHSRRGTNNIPNPSSFPTTGASIS----------------- 687
K G ++ ++L S ++ + P T I+
Sbjct: 803 SGSKSLFGNVNVTYFLRDMKASSASGDHELKKAKRPKTDKPITKPLNQLLEQAPPVHQPN 862
Query: 688 -NMKSCL--------------GVSNPQGKKDSTKPHRVKFLS-DSKDVPPVPLEPKHGTC 819
+KSCL V G+K++ P V L S+D P P+ +
Sbjct: 863 IQLKSCLKKPGNNRNGNHRTVRVKFMLGEKETESPFSVSILPLSSQDSEPKPVNNQVDHV 922
Query: 820 TGSGSCKYSKDVGPDISPQMLVLLEKCNDMVSEMKDNLGLQSFYSL 957
K DIS QM+ LL +CND V+ + LG ++SL
Sbjct: 923 EPPLDPSQLK---VDISLQMMELLTRCNDAVANVTGLLGYVPYHSL 965