BLASTX nr result
ID: Coptis21_contig00003904
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis21_contig00003904
(1631 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003635559.1| PREDICTED: cellulose synthase-like protein E... 628 e-177
gb|AFZ78595.1| cellulose synthase-like protein [Populus tomentosa] 624 e-176
ref|XP_002307850.1| predicted protein [Populus trichocarpa] gi|2... 623 e-176
emb|CBI29575.3| unnamed protein product [Vitis vinifera] 620 e-175
emb|CBI39755.3| unnamed protein product [Vitis vinifera] 619 e-175
>ref|XP_003635559.1| PREDICTED: cellulose synthase-like protein E6-like [Vitis vinifera]
Length = 734
Score = 628 bits (1619), Expect = e-177
Identities = 301/500 (60%), Positives = 377/500 (75%), Gaps = 1/500 (0%)
Frame = +1
Query: 4 VSSPRDHQTILQVLIDRRNPSAVDIDGVPLPTLVYLAREKRPSHPHNFKAGAMNALIRVS 183
VS PR+HQTILQ+LID R+ A+D++G PLPTLVYL+REKRP + HNFKAGAMNALIRVS
Sbjct: 235 VSDPRNHQTILQILIDGRDGKAMDVEGQPLPTLVYLSREKRPKYAHNFKAGAMNALIRVS 294
Query: 184 SKISNGKIILNVDCDMYSNNSDTVRDSLCFFMDERKGHEIAFVQFPQCFMNITKNDIYGG 363
S+ISN +IILNVDCDMYSNNS++V+D+LCF MDE G EIA+VQFPQCF NITKND+Y
Sbjct: 295 SRISNCEIILNVDCDMYSNNSESVKDALCFLMDEETGREIAYVQFPQCFNNITKNDLYAS 354
Query: 364 SLNVISKVXXXXXXXXXXXXXIGTGCFHNRETLCGRKYSKEYKFDYREIIED-KVQESMT 540
SLNVI +V IGTGCFH RETLCG+KY E + + D K++ES +
Sbjct: 355 SLNVIMEVELAGFDSHGGPCYIGTGCFHRRETLCGKKYDMECEREQTTRNNDGKIEESAS 414
Query: 541 ELEETTKILADCTFEKGTQWGKEMGLKYGCPVEDVITGLSIHCRGWKSIYCNPTRKGFLG 720
LEET K+LA C++E TQWGKEMGLKYGCPVEDV+TGLSI CRGWKSIY P RK FLG
Sbjct: 415 VLEETCKVLASCSYEDNTQWGKEMGLKYGCPVEDVLTGLSIQCRGWKSIYFTPERKAFLG 474
Query: 721 VAPTTLAQTLVQHKRWAEGNFQLLLSKFGPFSCGLGRIKLGHQLAYCVYGLWAPNCLATX 900
VAPTTL Q+L+QHKRW+EG+FQ+ LS + PF+ G RI L Q++YC++ LWAPNCL T
Sbjct: 475 VAPTTLLQSLIQHKRWSEGDFQIFLSSYCPFTYGHKRIPLKLQISYCIFLLWAPNCLPTL 534
Query: 901 XXXXXXXXXXXKGISLFPTISSPWFLPFAYLIITETAYTLGESLWAGCTLQGWWNDQRMW 1080
KGISLFP ISS W LPFAY++ + AY+LGE +W G TL GWWNDQRMW
Sbjct: 535 YYVAIPSLCLLKGISLFPKISSLWILPFAYVMSSSCAYSLGEFIWCGGTLLGWWNDQRMW 594
Query: 1081 MYKRTTSYLFGFIETLLKLFGFSNAAFVITAKVSEEDVSQRYEKEVIEFGNSSPMXXXXX 1260
++KRTTS+ FGF ET+LK GFS ++F +T+KV++E+ S+R+E+E++EFG +SPM
Sbjct: 595 VFKRTTSHFFGFSETILKQLGFSRSSFAVTSKVADEEESKRFEQEIMEFGAASPMFTILA 654
Query: 1261 XXXXXXXXXXVGGLHRIVVNIEIKVLESMFLQILLTGIAVIINLPLYEGLFFRKDNGRMP 1440
VGG+ R++++++ +VL+S+ LQILL G+ V++NLP+Y GLFFRKD RMP
Sbjct: 655 TLALLNLFTFVGGIKRVIIDMQAQVLDSLLLQILLCGVLVLMNLPVYHGLFFRKDATRMP 714
Query: 1441 TSVTVKSIILSLLACFLTLY 1500
SVT +SI +LLAC L LY
Sbjct: 715 CSVTYQSIAFALLACSLALY 734
>gb|AFZ78595.1| cellulose synthase-like protein [Populus tomentosa]
Length = 732
Score = 624 bits (1608), Expect = e-176
Identities = 303/499 (60%), Positives = 370/499 (74%)
Frame = +1
Query: 4 VSSPRDHQTILQVLIDRRNPSAVDIDGVPLPTLVYLAREKRPSHPHNFKAGAMNALIRVS 183
+SS RDHQTILQ+LID +P A+D +G PLPTLVYLAREKRP +PHNFKAGAMNALIRVS
Sbjct: 234 ISSRRDHQTILQILIDGTDPQAMDNEGQPLPTLVYLAREKRPQYPHNFKAGAMNALIRVS 293
Query: 184 SKISNGKIILNVDCDMYSNNSDTVRDSLCFFMDERKGHEIAFVQFPQCFMNITKNDIYGG 363
S+ISN IILNVDCDMYSNNS +VRD+LCFFMDE KG EI ++Q+PQ F NITKNDIY
Sbjct: 294 SRISNSPIILNVDCDMYSNNSYSVRDALCFFMDEEKGREIGYIQYPQAFENITKNDIYCN 353
Query: 364 SLNVISKVXXXXXXXXXXXXXIGTGCFHNRETLCGRKYSKEYKFDYREIIEDKVQESMTE 543
SLN+ +V IGTGCFH RE LCGR+YS E K D++E+ KV+ES
Sbjct: 354 SLNIEMEVDFPGLDGNGGPLYIGTGCFHRREALCGRRYSNENKVDWKEVNYRKVKESAGV 413
Query: 544 LEETTKILADCTFEKGTQWGKEMGLKYGCPVEDVITGLSIHCRGWKSIYCNPTRKGFLGV 723
LEE + LA CT+E T+WGKEMGLKYGCPVEDVITGLS+ C+GW+S+Y P RKGFLG+
Sbjct: 414 LEEVCRNLASCTYEANTEWGKEMGLKYGCPVEDVITGLSVQCKGWRSMYFIPERKGFLGL 473
Query: 724 APTTLAQTLVQHKRWAEGNFQLLLSKFGPFSCGLGRIKLGHQLAYCVYGLWAPNCLATXX 903
APTTL QTLVQHKRW+EG+FQ+L+++ PF G RI L QL+YC+Y LWA + A
Sbjct: 474 APTTLLQTLVQHKRWSEGDFQILITRHSPFLFGHNRIPLKLQLSYCIYLLWATSWFAVLY 533
Query: 904 XXXXXXXXXXKGISLFPTISSPWFLPFAYLIITETAYTLGESLWAGCTLQGWWNDQRMWM 1083
+GISLFP +SSPW FAY I AY L E +W+G T+QGWWN R+W+
Sbjct: 534 YLVVPPLCLLRGISLFPKLSSPWIQSFAYAIFANRAYGLVEFVWSGGTIQGWWNGLRIWV 593
Query: 1084 YKRTTSYLFGFIETLLKLFGFSNAAFVITAKVSEEDVSQRYEKEVIEFGNSSPMXXXXXX 1263
+KRTTS+LFGF + + KL GFS + FVITAKV+EEDVS+RYEKE +EFG SSPM
Sbjct: 594 FKRTTSHLFGFFDAIRKLLGFSTSTFVITAKVAEEDVSERYEKEKMEFGVSSPMLNILAT 653
Query: 1264 XXXXXXXXXVGGLHRIVVNIEIKVLESMFLQILLTGIAVIINLPLYEGLFFRKDNGRMPT 1443
VGG+ +++++E KVL+ + LQI+L G+ V+INLP+Y+GLFFRKD+GRMP
Sbjct: 654 LALLNMFSFVGGIKMLIMDVESKVLDLLALQIILCGLLVLINLPIYQGLFFRKDSGRMPN 713
Query: 1444 SVTVKSIILSLLACFLTLY 1500
SVT KSII+SLLAC + LY
Sbjct: 714 SVTYKSIIVSLLACSIALY 732
>ref|XP_002307850.1| predicted protein [Populus trichocarpa] gi|222853826|gb|EEE91373.1|
predicted protein [Populus trichocarpa]
Length = 732
Score = 623 bits (1607), Expect = e-176
Identities = 303/499 (60%), Positives = 370/499 (74%)
Frame = +1
Query: 4 VSSPRDHQTILQVLIDRRNPSAVDIDGVPLPTLVYLAREKRPSHPHNFKAGAMNALIRVS 183
+SS RDHQTILQ+LID +P A+D +G PLPTLVYLAREKRP +PHNFKAGAMNALIRVS
Sbjct: 234 ISSRRDHQTILQILIDGTDPQAMDNEGQPLPTLVYLAREKRPQYPHNFKAGAMNALIRVS 293
Query: 184 SKISNGKIILNVDCDMYSNNSDTVRDSLCFFMDERKGHEIAFVQFPQCFMNITKNDIYGG 363
S+ISN IILNVDCDMYSNNS +VRD+LCFFMDE KG EI ++Q+PQ F NITKNDIY
Sbjct: 294 SRISNSPIILNVDCDMYSNNSYSVRDALCFFMDEEKGREIGYIQYPQAFENITKNDIYCN 353
Query: 364 SLNVISKVXXXXXXXXXXXXXIGTGCFHNRETLCGRKYSKEYKFDYREIIEDKVQESMTE 543
SLN+ +V IGTGCFH RE LCGR+YS E K D++E+ KV+ES
Sbjct: 354 SLNIEMEVDFPGLDGNGGPLYIGTGCFHRREALCGRRYSNENKVDWKEVNYRKVKESAGV 413
Query: 544 LEETTKILADCTFEKGTQWGKEMGLKYGCPVEDVITGLSIHCRGWKSIYCNPTRKGFLGV 723
LEE + LA CT+E T+WGKEMGLKYGCPVEDVITGLS+ C+GW+S+Y P RKGFLG+
Sbjct: 414 LEEVCRNLASCTYEANTEWGKEMGLKYGCPVEDVITGLSVQCKGWRSMYFIPERKGFLGL 473
Query: 724 APTTLAQTLVQHKRWAEGNFQLLLSKFGPFSCGLGRIKLGHQLAYCVYGLWAPNCLATXX 903
APTTL QTLVQHKRW+EG+FQ+L+++ PF G RI L QL+YC+Y LWA + A
Sbjct: 474 APTTLLQTLVQHKRWSEGDFQILITRHSPFLFGHNRIPLKLQLSYCIYLLWATSWFAVLY 533
Query: 904 XXXXXXXXXXKGISLFPTISSPWFLPFAYLIITETAYTLGESLWAGCTLQGWWNDQRMWM 1083
+GISLFP +SSPW FAY I AY L E +W+G T+QGWWN QR+W+
Sbjct: 534 YLVVPPLCLLRGISLFPKLSSPWIQSFAYAIFANRAYGLVEFVWSGGTIQGWWNGQRIWV 593
Query: 1084 YKRTTSYLFGFIETLLKLFGFSNAAFVITAKVSEEDVSQRYEKEVIEFGNSSPMXXXXXX 1263
+KRTTS+LFGF + + KL GFS + FVITAKV+EEDVS+RYEKE +EFG SSPM
Sbjct: 594 FKRTTSHLFGFFDAIRKLLGFSTSTFVITAKVAEEDVSERYEKEKMEFGVSSPMFNILAT 653
Query: 1264 XXXXXXXXXVGGLHRIVVNIEIKVLESMFLQILLTGIAVIINLPLYEGLFFRKDNGRMPT 1443
VGG+ +++++E KVL+ + LQI+L G+ V+INLP+Y+GLFFRKD+GRMP
Sbjct: 654 LALLNMFSFVGGIKMLIMDVESKVLDLLALQIILCGLLVLINLPIYQGLFFRKDSGRMPY 713
Query: 1444 SVTVKSIILSLLACFLTLY 1500
SVT SII+SLLAC + LY
Sbjct: 714 SVTYTSIIVSLLACSIALY 732
>emb|CBI29575.3| unnamed protein product [Vitis vinifera]
Length = 1035
Score = 620 bits (1599), Expect = e-175
Identities = 297/496 (59%), Positives = 374/496 (75%), Gaps = 1/496 (0%)
Frame = +1
Query: 4 VSSPRDHQTILQVLIDRRNPSAVDIDGVPLPTLVYLAREKRPSHPHNFKAGAMNALIRVS 183
VS PR+HQTILQ+LID R+ A+D++G PLPTLVYL+REKRP + HNFKAGAMNALIRVS
Sbjct: 235 VSDPRNHQTILQILIDGRDGKAMDVEGQPLPTLVYLSREKRPKYAHNFKAGAMNALIRVS 294
Query: 184 SKISNGKIILNVDCDMYSNNSDTVRDSLCFFMDERKGHEIAFVQFPQCFMNITKNDIYGG 363
S+ISN +IILNVDCDMYSNNS++V+D+LCF MDE G EIA+VQFPQCF NITKND+Y
Sbjct: 295 SRISNCEIILNVDCDMYSNNSESVKDALCFLMDEETGREIAYVQFPQCFNNITKNDLYAS 354
Query: 364 SLNVISKVXXXXXXXXXXXXXIGTGCFHNRETLCGRKYSKEYKFDYREIIED-KVQESMT 540
SLNVI +V IGTGCFH RETLCG+KY E + + D K++ES +
Sbjct: 355 SLNVIMEVELAGFDSHGGPCYIGTGCFHRRETLCGKKYDMECEREQTTRNNDGKIEESAS 414
Query: 541 ELEETTKILADCTFEKGTQWGKEMGLKYGCPVEDVITGLSIHCRGWKSIYCNPTRKGFLG 720
LEET K+LA C++E TQWGKEMGLKYGCPVEDV+TGLSI CRGWKSIY P RK FLG
Sbjct: 415 VLEETCKVLASCSYEDNTQWGKEMGLKYGCPVEDVLTGLSIQCRGWKSIYFTPERKAFLG 474
Query: 721 VAPTTLAQTLVQHKRWAEGNFQLLLSKFGPFSCGLGRIKLGHQLAYCVYGLWAPNCLATX 900
VAPTTL Q+L+QHKRW+EG+FQ+ LS + PF+ G RI L Q++YC++ LWAPNCL T
Sbjct: 475 VAPTTLLQSLIQHKRWSEGDFQIFLSSYCPFTYGHKRIPLKLQISYCIFLLWAPNCLPTL 534
Query: 901 XXXXXXXXXXXKGISLFPTISSPWFLPFAYLIITETAYTLGESLWAGCTLQGWWNDQRMW 1080
KGISLFP ISS W LPFAY++ + AY+LGE +W G TL GWWNDQRMW
Sbjct: 535 YYVAIPSLCLLKGISLFPKISSLWILPFAYVMSSSCAYSLGEFIWCGGTLLGWWNDQRMW 594
Query: 1081 MYKRTTSYLFGFIETLLKLFGFSNAAFVITAKVSEEDVSQRYEKEVIEFGNSSPMXXXXX 1260
++KRTTS+ FGF ET+LK GFS ++F +T+KV++E+ S+R+E+E++EFG +SPM
Sbjct: 595 VFKRTTSHFFGFSETILKQLGFSRSSFAVTSKVADEEESKRFEQEIMEFGAASPMFTILA 654
Query: 1261 XXXXXXXXXXVGGLHRIVVNIEIKVLESMFLQILLTGIAVIINLPLYEGLFFRKDNGRMP 1440
VGG+ R++++++ +VL+S+ LQILL G+ V++NLP+Y GLFFRKD RMP
Sbjct: 655 TLALLNLFTFVGGIKRVIIDMQAQVLDSLLLQILLCGVLVLMNLPVYHGLFFRKDATRMP 714
Query: 1441 TSVTVKSIILSLLACF 1488
SVT +SI +LLA +
Sbjct: 715 CSVTYQSIAFALLASY 730
Score = 87.0 bits (214), Expect = 1e-14
Identities = 41/57 (71%), Positives = 49/57 (85%)
Frame = +1
Query: 7 SSPRDHQTILQVLIDRRNPSAVDIDGVPLPTLVYLAREKRPSHPHNFKAGAMNALIR 177
S P++HQTILQ+LID ++ AVD +G PLPTLVYL+REKRP + HNFKAGAMNALIR
Sbjct: 975 SEPQNHQTILQILIDGKDGKAVDEEGQPLPTLVYLSREKRPKYHHNFKAGAMNALIR 1031
>emb|CBI39755.3| unnamed protein product [Vitis vinifera]
Length = 710
Score = 619 bits (1595), Expect = e-175
Identities = 306/501 (61%), Positives = 375/501 (74%), Gaps = 1/501 (0%)
Frame = +1
Query: 1 SVSSPRDHQTILQVLIDRRNPSAVDIDGVPLPTLVYLAREKRPSHPHNFKAGAMNALIRV 180
S SS DH TILQ+LID R+P+A+D++G LPTLVYLAREKRP HPHNFKAGAMNALIRV
Sbjct: 208 SFSSRHDHDTILQILIDGRDPNAMDVEGSKLPTLVYLAREKRPKHPHNFKAGAMNALIRV 267
Query: 181 SSKISNGKIILNVDCDMYSNNSDTVRDSLCFFMDERKGHEIAFVQFPQCFMNITKNDIYG 360
SSKISNG IILNVDCDMYSNNS ++RD+LCFFMDE KG EIAFVQ+PQ F NITKN++Y
Sbjct: 268 SSKISNGAIILNVDCDMYSNNSHSIRDALCFFMDEEKGQEIAFVQYPQNFQNITKNELYS 327
Query: 361 GSLNVISKVXXXXXXXXXXXXXIGTGCFHNRETLCGRKYSKEYKFDY-REIIEDKVQESM 537
SL VIS+V IGTGCFH R+TLCGRK+SK+Y+ ++ RE I K +ES
Sbjct: 328 SSLRVISEVEFHGLDGYGGPMYIGTGCFHRRDTLCGRKFSKDYRNEWKRESI--KTEESA 385
Query: 538 TELEETTKILADCTFEKGTQWGKEMGLKYGCPVEDVITGLSIHCRGWKSIYCNPTRKGFL 717
EL+E+ K LA C +E TQWG EMGLKYGCPVEDVITGLSI C GWKS+Y NP +K FL
Sbjct: 386 HELQESLKNLASCRYEGDTQWGNEMGLKYGCPVEDVITGLSIQCLGWKSVYLNPAQKAFL 445
Query: 718 GVAPTTLAQTLVQHKRWAEGNFQLLLSKFGPFSCGLGRIKLGHQLAYCVYGLWAPNCLAT 897
GVAPTTL QTLVQHKRW+EG+ Q+LLSK+ P GLGRI G L YC Y LW N LAT
Sbjct: 446 GVAPTTLEQTLVQHKRWSEGDLQILLSKYSPAWYGLGRISPGLILGYCTYCLWPLNSLAT 505
Query: 898 XXXXXXXXXXXXKGISLFPTISSPWFLPFAYLIITETAYTLGESLWAGCTLQGWWNDQRM 1077
GI LFP +SSPWFLPFAY+I+ + + +L E LW+G TL GWWNDQR+
Sbjct: 506 LSYCIVPSLYLLHGIPLFPQVSSPWFLPFAYVILAKYSGSLAEFLWSGGTLLGWWNDQRI 565
Query: 1078 WMYKRTTSYLFGFIETLLKLFGFSNAAFVITAKVSEEDVSQRYEKEVIEFGNSSPMXXXX 1257
W++KRTTSYLF F++T+L+L GFS +F++TAKV++EDVSQRYE E++EFG SSPM
Sbjct: 566 WLFKRTTSYLFAFMDTILRLLGFSETSFILTAKVADEDVSQRYEGEMMEFGGSSPMFTIL 625
Query: 1258 XXXXXXXXXXXVGGLHRIVVNIEIKVLESMFLQILLTGIAVIINLPLYEGLFFRKDNGRM 1437
VG + + V ++++V ++M LQILL + ++IN PLY+GLF RKDNG+M
Sbjct: 626 ATLAMLNLFCVVGVVKK--VGLDMEVYKTMALQILLAVVLLLINGPLYQGLFLRKDNGKM 683
Query: 1438 PTSVTVKSIILSLLACFLTLY 1500
P S+TVKS++L+L+AC + Y
Sbjct: 684 PWSLTVKSVLLALVACACSTY 704