BLASTX nr result

ID: Coptis21_contig00003903 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00003903
         (1438 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264723.2| PREDICTED: uncharacterized protein LOC100266...   528   e-147
gb|ABK92591.1| unknown [Populus trichocarpa]                          523   e-146
ref|XP_002322412.1| predicted protein [Populus trichocarpa] gi|2...   521   e-145
ref|XP_004148130.1| PREDICTED: uncharacterized protein LOC101209...   514   e-143
ref|NP_199968.1| protein EXORDIUM like 3 [Arabidopsis thaliana] ...   509   e-142

>ref|XP_002264723.2| PREDICTED: uncharacterized protein LOC100266367 [Vitis vinifera]
          Length = 348

 Score =  528 bits (1360), Expect = e-147
 Identities = 246/348 (70%), Positives = 285/348 (81%)
 Frame = +3

Query: 78   MHQGSVGRCLAPSVPVXXXXXXXXXXXFITPVLGSTIWPHHNINNTDLVFGASKKFEGSS 257
            M QG V R  AP++P+           F    +    WP+HN+N TDL FG SKK+EGSS
Sbjct: 1    MGQGCVRRFSAPTLPMLLALILLFLHLFAGNAVAWRPWPNHNVNATDLQFGGSKKYEGSS 60

Query: 258  DFVHLRYHMGPVLTSNITVHLIWYGAWQKSQKKIIRGFLNSISAVDSKHPSVSSWWKTVQ 437
            +FVHLRYHMGPVLT NITV++IWYG WQ++QKKIIR F+NSIS+ D+K PSV+ WW+TV 
Sbjct: 61   EFVHLRYHMGPVLTENITVNIIWYGTWQRAQKKIIREFINSISSRDAKRPSVAGWWRTVT 120

Query: 438  LYTDQTGANISRHVNVGDEKNDRFYSHGKSLTRLSIQSVIKSAVTTRTRPLPINPKSGLY 617
             YTDQTGANISR +++  EK+DRFYSHGK LTRLSIQSVIKSAVT +T+PLPINPKSG+Y
Sbjct: 121  FYTDQTGANISRSLHLAAEKSDRFYSHGKKLTRLSIQSVIKSAVTAKTKPLPINPKSGIY 180

Query: 618  LLLTSDDVHVENFCGQVCGFHYFTFPSIVGYTLPYAWVGNSAKQCPGFCAYPFAVPNYIP 797
            LLLTSDDV+V++FCGQVCGFHYFTFPSIVGYTLPYAWVGNSAK CPG CAYPFAVP+YIP
Sbjct: 181  LLLTSDDVYVQDFCGQVCGFHYFTFPSIVGYTLPYAWVGNSAKLCPGMCAYPFAVPDYIP 240

Query: 798  GLKPVKSPNNDAGVDGMISVIAHELAELATNPLVNAWYAGQDPSFPTEIADLCEXXXXXX 977
            GLKP+KSPN DAG+DGMISVI HE+AELATNPLVNAWYAG DP FP EIADLCE      
Sbjct: 241  GLKPLKSPNGDAGIDGMISVIGHEIAELATNPLVNAWYAGTDPVFPVEIADLCEGIYGTG 300

Query: 978  XXXXXXXQLMEDHDGATYNMNGMRRRFLVQWVWNPVVNYCSGPNALDQ 1121
                   QL++  DGATYNMNG+RRRFLVQW+W+ V++YC+GPNALDQ
Sbjct: 301  GGGSYTGQLLDGEDGATYNMNGIRRRFLVQWLWSHVLSYCTGPNALDQ 348


>gb|ABK92591.1| unknown [Populus trichocarpa]
          Length = 342

 Score =  523 bits (1347), Expect = e-146
 Identities = 243/319 (76%), Positives = 273/319 (85%)
 Frame = +3

Query: 165  TPVLGSTIWPHHNINNTDLVFGASKKFEGSSDFVHLRYHMGPVLTSNITVHLIWYGAWQK 344
            TP+     WPH   N++DL++ +SKKFEGSS+FVHLRYHMGPVLT NITVH IWYG W+K
Sbjct: 24   TPITCWRPWPHLKPNSSDLLYDSSKKFEGSSEFVHLRYHMGPVLTGNITVHTIWYGRWEK 83

Query: 345  SQKKIIRGFLNSISAVDSKHPSVSSWWKTVQLYTDQTGANISRHVNVGDEKNDRFYSHGK 524
            SQKKIIR F+NSIS V+++ PSVS WW+TVQLYTDQTGANIS  V +G EKNDRFYSHGK
Sbjct: 84   SQKKIIREFINSISTVNARPPSVSGWWRTVQLYTDQTGANISHTVQLGQEKNDRFYSHGK 143

Query: 525  SLTRLSIQSVIKSAVTTRTRPLPINPKSGLYLLLTSDDVHVENFCGQVCGFHYFTFPSIV 704
            SLTRLSIQSVIKSAVT +++PLP NPK+GLYLLLTSDDV+V++FCGQVCGFHYFTFPSIV
Sbjct: 144  SLTRLSIQSVIKSAVTAKSKPLPTNPKNGLYLLLTSDDVYVQDFCGQVCGFHYFTFPSIV 203

Query: 705  GYTLPYAWVGNSAKQCPGFCAYPFAVPNYIPGLKPVKSPNNDAGVDGMISVIAHELAELA 884
            GYTLPYAWVGNS K CPG CAYPF+VP YIPGLK +KSPN D GVDGMISVIAHE+AELA
Sbjct: 204  GYTLPYAWVGNSEKLCPGVCAYPFSVPKYIPGLKALKSPNGDVGVDGMISVIAHEIAELA 263

Query: 885  TNPLVNAWYAGQDPSFPTEIADLCEXXXXXXXXXXXXXQLMEDHDGATYNMNGMRRRFLV 1064
            TNPLVNAWYAGQDPSFP EIADLCE             Q++ DHDGATYNMNG+RR+FLV
Sbjct: 264  TNPLVNAWYAGQDPSFPVEIADLCEGIYGTGGGGSYTGQMLLDHDGATYNMNGIRRKFLV 323

Query: 1065 QWVWNPVVNYCSGPNALDQ 1121
            QWVWN  V+YC+GPNALDQ
Sbjct: 324  QWVWNHFVSYCTGPNALDQ 342


>ref|XP_002322412.1| predicted protein [Populus trichocarpa] gi|222869408|gb|EEF06539.1|
            predicted protein [Populus trichocarpa]
          Length = 309

 Score =  521 bits (1343), Expect = e-145
 Identities = 241/309 (77%), Positives = 271/309 (87%)
 Frame = +3

Query: 192  PHHNINNTDLVFGASKKFEGSSDFVHLRYHMGPVLTSNITVHLIWYGAWQKSQKKIIRGF 371
            PH N N++DL++ +SKKFEGSS+FVHLRYHMGPVLT NITVH IWYG WQKSQKKIIRGF
Sbjct: 1    PHLNPNSSDLLYDSSKKFEGSSEFVHLRYHMGPVLTGNITVHTIWYGRWQKSQKKIIRGF 60

Query: 372  LNSISAVDSKHPSVSSWWKTVQLYTDQTGANISRHVNVGDEKNDRFYSHGKSLTRLSIQS 551
            +NSIS V ++HPSV+ WW+TVQLYTDQTGANIS  V +G EKNDRFYSHGKSLTRLSIQS
Sbjct: 61   INSISDVHARHPSVAGWWRTVQLYTDQTGANISHTVQLGQEKNDRFYSHGKSLTRLSIQS 120

Query: 552  VIKSAVTTRTRPLPINPKSGLYLLLTSDDVHVENFCGQVCGFHYFTFPSIVGYTLPYAWV 731
            VI+SAVT RT+PLPINP++GLYLLLTSDDV+V++FCGQVCGFHYFTFPSIVGYTLPYAWV
Sbjct: 121  VIRSAVTARTKPLPINPRNGLYLLLTSDDVYVQDFCGQVCGFHYFTFPSIVGYTLPYAWV 180

Query: 732  GNSAKQCPGFCAYPFAVPNYIPGLKPVKSPNNDAGVDGMISVIAHELAELATNPLVNAWY 911
            GNSAKQCPG CAYPFAVP + PG K +KSPN D GV+GMISVIAHE+AELATNPLVNAWY
Sbjct: 181  GNSAKQCPGVCAYPFAVPEFRPGWKALKSPNGDVGVEGMISVIAHEIAELATNPLVNAWY 240

Query: 912  AGQDPSFPTEIADLCEXXXXXXXXXXXXXQLMEDHDGATYNMNGMRRRFLVQWVWNPVVN 1091
            AGQDPS P EIADLCE             Q++ DHDGATYNMNG+RR+FLVQWVWN +V+
Sbjct: 241  AGQDPSAPVEIADLCEGIYGTGGGGSYTGQMLTDHDGATYNMNGIRRKFLVQWVWNHLVS 300

Query: 1092 YCSGPNALD 1118
            YC+GPNALD
Sbjct: 301  YCTGPNALD 309


>ref|XP_004148130.1| PREDICTED: uncharacterized protein LOC101209305 [Cucumis sativus]
            gi|449526565|ref|XP_004170284.1| PREDICTED:
            uncharacterized protein LOC101231285 [Cucumis sativus]
          Length = 346

 Score =  514 bits (1325), Expect = e-143
 Identities = 245/346 (70%), Positives = 276/346 (79%), Gaps = 3/346 (0%)
 Frame = +3

Query: 93   VGRCLAPSVPVXXXXXXXXXXXFITPVLGSTIWPH---HNINNTDLVFGASKKFEGSSDF 263
            +G  L P   +            ++P      WPH    N+++   +   SKK+EGSS+F
Sbjct: 1    MGSLLVPPTAISLLAALSLFLLLLSPAAAWRPWPHLAKSNVSDDPALVRDSKKYEGSSEF 60

Query: 264  VHLRYHMGPVLTSNITVHLIWYGAWQKSQKKIIRGFLNSISAVDSKHPSVSSWWKTVQLY 443
            VHL+YHMGPVLT+NITVH+IWYG WQ+ QKKIIR F+NSISA DSK PSV  WW+TVQLY
Sbjct: 61   VHLKYHMGPVLTANITVHIIWYGTWQRDQKKIIREFINSISAHDSKSPSVFGWWRTVQLY 120

Query: 444  TDQTGANISRHVNVGDEKNDRFYSHGKSLTRLSIQSVIKSAVTTRTRPLPINPKSGLYLL 623
            TDQTGANISR V +G+EKNDRFYSHGKSLTRLSIQ+VIKSAVT ++RPLPIN K+GLYLL
Sbjct: 121  TDQTGANISRTVRLGEEKNDRFYSHGKSLTRLSIQTVIKSAVTAKSRPLPINAKNGLYLL 180

Query: 624  LTSDDVHVENFCGQVCGFHYFTFPSIVGYTLPYAWVGNSAKQCPGFCAYPFAVPNYIPGL 803
            LTSDDV+VENFCGQVCGFHYFTFPSIVGYTLPYAWVGNS K CPG CAYPFAVP+YIPGL
Sbjct: 181  LTSDDVYVENFCGQVCGFHYFTFPSIVGYTLPYAWVGNSEKLCPGVCAYPFAVPSYIPGL 240

Query: 804  KPVKSPNNDAGVDGMISVIAHELAELATNPLVNAWYAGQDPSFPTEIADLCEXXXXXXXX 983
            KP+KSPN D GVDGMISVIAHE+AELA+NPLVNAWYAG DP  P EIADLCE        
Sbjct: 241  KPMKSPNGDVGVDGMISVIAHEVAELASNPLVNAWYAGGDPIAPVEIADLCEGIYGTGGG 300

Query: 984  XXXXXQLMEDHDGATYNMNGMRRRFLVQWVWNPVVNYCSGPNALDQ 1121
                 QLM+  DGATYNMNG+RRR+LVQWVWN VVNYC+GPNALDQ
Sbjct: 301  GSYTGQLMDGRDGATYNMNGIRRRYLVQWVWNHVVNYCTGPNALDQ 346


>ref|NP_199968.1| protein EXORDIUM like 3 [Arabidopsis thaliana]
            gi|16226762|gb|AAL16255.1|AF428325_1 AT5g51550/K17N15_10
            [Arabidopsis thaliana] gi|9758197|dbj|BAB08671.1| unnamed
            protein product [Arabidopsis thaliana]
            gi|332008714|gb|AED96097.1| protein EXORDIUM like 3
            [Arabidopsis thaliana]
          Length = 337

 Score =  509 bits (1311), Expect = e-142
 Identities = 237/304 (77%), Positives = 266/304 (87%)
 Frame = +3

Query: 207  NNTDLVFGASKKFEGSSDFVHLRYHMGPVLTSNITVHLIWYGAWQKSQKKIIRGFLNSIS 386
            N +D +F ASKKFEGSS+ V LRYHMGPVLT+NITVH IWYG WQKSQKKIIR F+NSIS
Sbjct: 34   NGSDQIFDASKKFEGSSNLVRLRYHMGPVLTNNITVHPIWYGTWQKSQKKIIREFINSIS 93

Query: 387  AVDSKHPSVSSWWKTVQLYTDQTGANISRHVNVGDEKNDRFYSHGKSLTRLSIQSVIKSA 566
            AV SKHPSVS WWKTVQLYTDQTG+NI+  V +G+EKNDRFYSHGKSLTRLSIQSVIKSA
Sbjct: 94   AVGSKHPSVSGWWKTVQLYTDQTGSNITGTVRLGEEKNDRFYSHGKSLTRLSIQSVIKSA 153

Query: 567  VTTRTRPLPINPKSGLYLLLTSDDVHVENFCGQVCGFHYFTFPSIVGYTLPYAWVGNSAK 746
            VT+R+RPLP+NPKSGLYLLLT+DDV+V++FCGQVCGFHYFTFPSIVG+TLPYAWVGNSAK
Sbjct: 154  VTSRSRPLPVNPKSGLYLLLTADDVYVQDFCGQVCGFHYFTFPSIVGFTLPYAWVGNSAK 213

Query: 747  QCPGFCAYPFAVPNYIPGLKPVKSPNNDAGVDGMISVIAHELAELATNPLVNAWYAGQDP 926
             CPG CAYPFAVP +IPGLKPVKSPN D GVDGMISVIAHE+AELATNPLVNAWYAG DP
Sbjct: 214  LCPGVCAYPFAVPAFIPGLKPVKSPNGDVGVDGMISVIAHEIAELATNPLVNAWYAGPDP 273

Query: 927  SFPTEIADLCEXXXXXXXXXXXXXQLMEDHDGATYNMNGMRRRFLVQWVWNPVVNYCSGP 1106
              P EIADLCE             Q++ DH GATYN+NG+RRR+L+QW+W+ VV+YC+GP
Sbjct: 274  VAPVEIADLCEGIYGTGGGGSYTGQMLNDHSGATYNVNGIRRRYLIQWLWSHVVSYCTGP 333

Query: 1107 NALD 1118
            NALD
Sbjct: 334  NALD 337


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