BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00003897
         (926 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004143295.1| PREDICTED: 60S ribosomal protein L24-like [C...   224   2e-56
gb|AFK40850.1| unknown [Medicago truncatula]                          224   2e-56
gb|AFK43072.1| unknown [Lotus japonicus]                              223   4e-56
ref|XP_002528634.1| 60S ribosomal protein L24, putative [Ricinus...   223   4e-56
ref|XP_002318822.1| predicted protein [Populus trichocarpa] gi|2...   223   4e-56

>ref|XP_004143295.1| PREDICTED: 60S ribosomal protein L24-like [Cucumis sativus]
           gi|449523211|ref|XP_004168617.1| PREDICTED: 60S
           ribosomal protein L24-like [Cucumis sativus]
          Length = 164

 Score =  224 bits (572), Expect = 2e-56
 Identities = 112/115 (97%), Positives = 113/115 (98%)
 Frame = +3

Query: 84  MVLKTELCRFSGAKIYPGRGIRFVRADSQVFLFLNSKCKRYFHNRLKPSKLTWTAMYRKQ 263
           MVLKTELCRFSGAKIYPGRGIRFVRADSQVFLF NSKCKRYFHNRLKPSKLTWTAMYRKQ
Sbjct: 1   MVLKTELCRFSGAKIYPGRGIRFVRADSQVFLFANSKCKRYFHNRLKPSKLTWTAMYRKQ 60

Query: 264 HKKDIAAEAVKKRRRATKKPYSRSIVGATLEVIQKKRTEKPEVRDAAREAALREI 428
           HKKDIA EAVKKRRRATKKPYSRSIVGATLEVIQKKR+EKPEVRDAAREAALREI
Sbjct: 61  HKKDIAQEAVKKRRRATKKPYSRSIVGATLEVIQKKRSEKPEVRDAAREAALREI 115


>gb|AFK40850.1| unknown [Medicago truncatula]
          Length = 163

 Score =  224 bits (571), Expect = 2e-56
 Identities = 110/115 (95%), Positives = 114/115 (99%)
 Frame = +3

Query: 84  MVLKTELCRFSGAKIYPGRGIRFVRADSQVFLFLNSKCKRYFHNRLKPSKLTWTAMYRKQ 263
           MVLKTELCRFSGAKIYPGRGIRF+R+DSQVFLF+NSKCKRYFHN+LKPSKLTWTAMYRKQ
Sbjct: 1   MVLKTELCRFSGAKIYPGRGIRFIRSDSQVFLFVNSKCKRYFHNKLKPSKLTWTAMYRKQ 60

Query: 264 HKKDIAAEAVKKRRRATKKPYSRSIVGATLEVIQKKRTEKPEVRDAAREAALREI 428
           HKKDIA EAVKKRRRATKKPYSRSIVGATLEVIQKKRTEKPEVRDAAREAALREI
Sbjct: 61  HKKDIAQEAVKKRRRATKKPYSRSIVGATLEVIQKKRTEKPEVRDAAREAALREI 115


>gb|AFK43072.1| unknown [Lotus japonicus]
          Length = 164

 Score =  223 bits (569), Expect = 4e-56
 Identities = 110/115 (95%), Positives = 113/115 (98%)
 Frame = +3

Query: 84  MVLKTELCRFSGAKIYPGRGIRFVRADSQVFLFLNSKCKRYFHNRLKPSKLTWTAMYRKQ 263
           MVLKTELCRFSGAKIYPGRGIRF+R+DSQVFLF+NSKCK YFHNRLKPSKLTWTAMYRKQ
Sbjct: 1   MVLKTELCRFSGAKIYPGRGIRFIRSDSQVFLFVNSKCKHYFHNRLKPSKLTWTAMYRKQ 60

Query: 264 HKKDIAAEAVKKRRRATKKPYSRSIVGATLEVIQKKRTEKPEVRDAAREAALREI 428
           HKKDIA EAVKKRRRATKKPYSRSIVGATLEVIQKKRTEKPEVRDAAREAALREI
Sbjct: 61  HKKDIAQEAVKKRRRATKKPYSRSIVGATLEVIQKKRTEKPEVRDAAREAALREI 115


>ref|XP_002528634.1| 60S ribosomal protein L24, putative [Ricinus communis]
           gi|223531923|gb|EEF33737.1| 60S ribosomal protein L24,
           putative [Ricinus communis]
          Length = 186

 Score =  223 bits (569), Expect = 4e-56
 Identities = 110/124 (88%), Positives = 115/124 (92%)
 Frame = +3

Query: 57  QNNKQTTTDMVLKTELCRFSGAKIYPGRGIRFVRADSQVFLFLNSKCKRYFHNRLKPSKL 236
           Q  +Q    MVLKTELCRFSGAKIYPG+GIRF+R+DSQVFLF NSKCKRYFHNRLKPSKL
Sbjct: 14  QQQQQDQAAMVLKTELCRFSGAKIYPGKGIRFIRSDSQVFLFANSKCKRYFHNRLKPSKL 73

Query: 237 TWTAMYRKQHKKDIAAEAVKKRRRATKKPYSRSIVGATLEVIQKKRTEKPEVRDAAREAA 416
           TWTAMYRKQHKKDIA EAVKKRRR TKKPYSRSIVGATLEVIQK+RTEKPEVRDAAREAA
Sbjct: 74  TWTAMYRKQHKKDIAQEAVKKRRRTTKKPYSRSIVGATLEVIQKRRTEKPEVRDAAREAA 133

Query: 417 LREI 428
           LREI
Sbjct: 134 LREI 137


>ref|XP_002318822.1| predicted protein [Populus trichocarpa]
           gi|224147380|ref|XP_002336467.1| predicted protein
           [Populus trichocarpa] gi|118481582|gb|ABK92733.1|
           unknown [Populus trichocarpa]
           gi|222835080|gb|EEE73529.1| predicted protein [Populus
           trichocarpa] gi|222859495|gb|EEE97042.1| predicted
           protein [Populus trichocarpa]
          Length = 163

 Score =  223 bits (569), Expect = 4e-56
 Identities = 109/115 (94%), Positives = 113/115 (98%)
 Frame = +3

Query: 84  MVLKTELCRFSGAKIYPGRGIRFVRADSQVFLFLNSKCKRYFHNRLKPSKLTWTAMYRKQ 263
           MVLKTELCRFSGAKIYPG+GIRF+R+DSQVFLF NSKCKRYFHNRLKPSKLTWTAMYRKQ
Sbjct: 1   MVLKTELCRFSGAKIYPGKGIRFIRSDSQVFLFANSKCKRYFHNRLKPSKLTWTAMYRKQ 60

Query: 264 HKKDIAAEAVKKRRRATKKPYSRSIVGATLEVIQKKRTEKPEVRDAAREAALREI 428
           HKKDIAAE +KKRRRATKKPYSRSIVGATLEVIQKKRTEKPEVRDAAREAALREI
Sbjct: 61  HKKDIAAETIKKRRRATKKPYSRSIVGATLEVIQKKRTEKPEVRDAAREAALREI 115