BLASTX nr result
ID: Coptis21_contig00003897
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00003897 (926 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_004143295.1| PREDICTED: 60S ribosomal protein L24-like [C... 224 2e-56 gb|AFK40850.1| unknown [Medicago truncatula] 224 2e-56 gb|AFK43072.1| unknown [Lotus japonicus] 223 4e-56 ref|XP_002528634.1| 60S ribosomal protein L24, putative [Ricinus... 223 4e-56 ref|XP_002318822.1| predicted protein [Populus trichocarpa] gi|2... 223 4e-56 >ref|XP_004143295.1| PREDICTED: 60S ribosomal protein L24-like [Cucumis sativus] gi|449523211|ref|XP_004168617.1| PREDICTED: 60S ribosomal protein L24-like [Cucumis sativus] Length = 164 Score = 224 bits (572), Expect = 2e-56 Identities = 112/115 (97%), Positives = 113/115 (98%) Frame = +3 Query: 84 MVLKTELCRFSGAKIYPGRGIRFVRADSQVFLFLNSKCKRYFHNRLKPSKLTWTAMYRKQ 263 MVLKTELCRFSGAKIYPGRGIRFVRADSQVFLF NSKCKRYFHNRLKPSKLTWTAMYRKQ Sbjct: 1 MVLKTELCRFSGAKIYPGRGIRFVRADSQVFLFANSKCKRYFHNRLKPSKLTWTAMYRKQ 60 Query: 264 HKKDIAAEAVKKRRRATKKPYSRSIVGATLEVIQKKRTEKPEVRDAAREAALREI 428 HKKDIA EAVKKRRRATKKPYSRSIVGATLEVIQKKR+EKPEVRDAAREAALREI Sbjct: 61 HKKDIAQEAVKKRRRATKKPYSRSIVGATLEVIQKKRSEKPEVRDAAREAALREI 115 >gb|AFK40850.1| unknown [Medicago truncatula] Length = 163 Score = 224 bits (571), Expect = 2e-56 Identities = 110/115 (95%), Positives = 114/115 (99%) Frame = +3 Query: 84 MVLKTELCRFSGAKIYPGRGIRFVRADSQVFLFLNSKCKRYFHNRLKPSKLTWTAMYRKQ 263 MVLKTELCRFSGAKIYPGRGIRF+R+DSQVFLF+NSKCKRYFHN+LKPSKLTWTAMYRKQ Sbjct: 1 MVLKTELCRFSGAKIYPGRGIRFIRSDSQVFLFVNSKCKRYFHNKLKPSKLTWTAMYRKQ 60 Query: 264 HKKDIAAEAVKKRRRATKKPYSRSIVGATLEVIQKKRTEKPEVRDAAREAALREI 428 HKKDIA EAVKKRRRATKKPYSRSIVGATLEVIQKKRTEKPEVRDAAREAALREI Sbjct: 61 HKKDIAQEAVKKRRRATKKPYSRSIVGATLEVIQKKRTEKPEVRDAAREAALREI 115 >gb|AFK43072.1| unknown [Lotus japonicus] Length = 164 Score = 223 bits (569), Expect = 4e-56 Identities = 110/115 (95%), Positives = 113/115 (98%) Frame = +3 Query: 84 MVLKTELCRFSGAKIYPGRGIRFVRADSQVFLFLNSKCKRYFHNRLKPSKLTWTAMYRKQ 263 MVLKTELCRFSGAKIYPGRGIRF+R+DSQVFLF+NSKCK YFHNRLKPSKLTWTAMYRKQ Sbjct: 1 MVLKTELCRFSGAKIYPGRGIRFIRSDSQVFLFVNSKCKHYFHNRLKPSKLTWTAMYRKQ 60 Query: 264 HKKDIAAEAVKKRRRATKKPYSRSIVGATLEVIQKKRTEKPEVRDAAREAALREI 428 HKKDIA EAVKKRRRATKKPYSRSIVGATLEVIQKKRTEKPEVRDAAREAALREI Sbjct: 61 HKKDIAQEAVKKRRRATKKPYSRSIVGATLEVIQKKRTEKPEVRDAAREAALREI 115 >ref|XP_002528634.1| 60S ribosomal protein L24, putative [Ricinus communis] gi|223531923|gb|EEF33737.1| 60S ribosomal protein L24, putative [Ricinus communis] Length = 186 Score = 223 bits (569), Expect = 4e-56 Identities = 110/124 (88%), Positives = 115/124 (92%) Frame = +3 Query: 57 QNNKQTTTDMVLKTELCRFSGAKIYPGRGIRFVRADSQVFLFLNSKCKRYFHNRLKPSKL 236 Q +Q MVLKTELCRFSGAKIYPG+GIRF+R+DSQVFLF NSKCKRYFHNRLKPSKL Sbjct: 14 QQQQQDQAAMVLKTELCRFSGAKIYPGKGIRFIRSDSQVFLFANSKCKRYFHNRLKPSKL 73 Query: 237 TWTAMYRKQHKKDIAAEAVKKRRRATKKPYSRSIVGATLEVIQKKRTEKPEVRDAAREAA 416 TWTAMYRKQHKKDIA EAVKKRRR TKKPYSRSIVGATLEVIQK+RTEKPEVRDAAREAA Sbjct: 74 TWTAMYRKQHKKDIAQEAVKKRRRTTKKPYSRSIVGATLEVIQKRRTEKPEVRDAAREAA 133 Query: 417 LREI 428 LREI Sbjct: 134 LREI 137 >ref|XP_002318822.1| predicted protein [Populus trichocarpa] gi|224147380|ref|XP_002336467.1| predicted protein [Populus trichocarpa] gi|118481582|gb|ABK92733.1| unknown [Populus trichocarpa] gi|222835080|gb|EEE73529.1| predicted protein [Populus trichocarpa] gi|222859495|gb|EEE97042.1| predicted protein [Populus trichocarpa] Length = 163 Score = 223 bits (569), Expect = 4e-56 Identities = 109/115 (94%), Positives = 113/115 (98%) Frame = +3 Query: 84 MVLKTELCRFSGAKIYPGRGIRFVRADSQVFLFLNSKCKRYFHNRLKPSKLTWTAMYRKQ 263 MVLKTELCRFSGAKIYPG+GIRF+R+DSQVFLF NSKCKRYFHNRLKPSKLTWTAMYRKQ Sbjct: 1 MVLKTELCRFSGAKIYPGKGIRFIRSDSQVFLFANSKCKRYFHNRLKPSKLTWTAMYRKQ 60 Query: 264 HKKDIAAEAVKKRRRATKKPYSRSIVGATLEVIQKKRTEKPEVRDAAREAALREI 428 HKKDIAAE +KKRRRATKKPYSRSIVGATLEVIQKKRTEKPEVRDAAREAALREI Sbjct: 61 HKKDIAAETIKKRRRATKKPYSRSIVGATLEVIQKKRTEKPEVRDAAREAALREI 115