BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00003890
         (1265 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274648.1| PREDICTED: KH domain-containing protein At5g...   436   e-120
ref|XP_002532938.1| nucleic acid binding protein, putative [Rici...   433   e-119
ref|XP_002299073.1| predicted protein [Populus trichocarpa] gi|2...   424   e-116
ref|XP_003522828.1| PREDICTED: KH domain-containing protein At5g...   421   e-115
ref|XP_002330577.1| predicted protein [Populus trichocarpa] gi|2...   417   e-114

>ref|XP_002274648.1| PREDICTED: KH domain-containing protein At5g56140 isoform 1 [Vitis
           vinifera] gi|296089986|emb|CBI39805.3| unnamed protein
           product [Vitis vinifera]
          Length = 287

 Score =  436 bits (1121), Expect = e-120
 Identities = 219/289 (75%), Positives = 245/289 (84%)
 Frame = +2

Query: 20  SGGRYMPYSPSATHSPHHQNLSAFRSTAAALVEQDNYLAELLAERQKISPFMPVLPISFR 199
           S GRYM YSPS + +PH  +++  RS  +ALVEQ+ YL+ELLAER K+SPFMPVLP S+R
Sbjct: 2   SSGRYMAYSPSPSTAPHSPHIAGLRSATSALVEQEKYLSELLAERHKLSPFMPVLPHSYR 61

Query: 200 LLNQEILRVTTLLGNASLLDQSGFEHASPLTSGGIFSNGGADIHGWASAFQSERLGLIQX 379
           LLNQEILRVTTLLGNAS+LDQSG EHASPL SGGIFSNGGA+++GWAS FQSE  GL   
Sbjct: 62  LLNQEILRVTTLLGNASILDQSGLEHASPLASGGIFSNGGANVNGWASPFQSEMSGL--- 118

Query: 380 XXXXXXXXXXXXXXXXXVKKTLRVDIPLDKYPTFNFVGRLLGPRGNSLKRVEANTECRVL 559
                            VK+T+RVDIP++K+P++NFVGRLLGPRGNSLKR+EA TECRVL
Sbjct: 119 SAAQNWLGSQGSSSGLIVKRTIRVDIPVEKFPSYNFVGRLLGPRGNSLKRMEATTECRVL 178

Query: 560 IRGHGSIKDPVREDMMRGKPGYEHLNEPLHILVEAELPVEIIDARLMQAREILEDLLKPV 739
           IRG GSIKDP RE+MMRGKPGYEHLNEPLHILVEAELPVEI+DARLMQAREILEDLLKPV
Sbjct: 179 IRGRGSIKDPAREEMMRGKPGYEHLNEPLHILVEAELPVEIVDARLMQAREILEDLLKPV 238

Query: 740 DECQDFFKKQQLRELAMINGTLRDEASQMSGSVSPFHNSLGMKRAKTRG 886
           DE QDFFKKQQLRELAM+NGTLR+E S MSGSVSPFHNSLGMKRAKTRG
Sbjct: 239 DESQDFFKKQQLRELAMLNGTLREEGSHMSGSVSPFHNSLGMKRAKTRG 287


>ref|XP_002532938.1| nucleic acid binding protein, putative [Ricinus communis]
           gi|223527289|gb|EEF29442.1| nucleic acid binding
           protein, putative [Ricinus communis]
          Length = 300

 Score =  433 bits (1113), Expect = e-119
 Identities = 217/288 (75%), Positives = 246/288 (85%)
 Frame = +2

Query: 23  GGRYMPYSPSATHSPHHQNLSAFRSTAAALVEQDNYLAELLAERQKISPFMPVLPISFRL 202
           GGR+M YSPS + +PH  +LS  RS ++ALVEQ+ YL+ELLAER K+SPFMPVLP ++RL
Sbjct: 14  GGRFMAYSPSPS-APHSPHLSGLRSASSALVEQEKYLSELLAERHKLSPFMPVLPHTYRL 72

Query: 203 LNQEILRVTTLLGNASLLDQSGFEHASPLTSGGIFSNGGADIHGWASAFQSERLGLIQXX 382
           L+QEILRVTTLLGNAS+L QSG EHASPL SGG+FSNGGAD +GWAS FQSE  GLIQ  
Sbjct: 73  LSQEILRVTTLLGNASVLGQSGLEHASPLASGGMFSNGGADANGWASRFQSEMSGLIQPS 132

Query: 383 XXXXXXXXXXXXXXXXVKKTLRVDIPLDKYPTFNFVGRLLGPRGNSLKRVEANTECRVLI 562
                           VK+T+RVDIP+++YP++NFVGRLLGPRGNSLKRVEA+TECRVLI
Sbjct: 133 SAQNWLSSQGSSSGLIVKRTIRVDIPIERYPSYNFVGRLLGPRGNSLKRVEASTECRVLI 192

Query: 563 RGHGSIKDPVREDMMRGKPGYEHLNEPLHILVEAELPVEIIDARLMQAREILEDLLKPVD 742
           RG GSIKDP RE+MMRGKPGYEHLNEPLHILVEAELPVEI+DAR+ QAREILEDLLKPVD
Sbjct: 193 RGRGSIKDPAREEMMRGKPGYEHLNEPLHILVEAELPVEIVDARIAQAREILEDLLKPVD 252

Query: 743 ECQDFFKKQQLRELAMINGTLRDEASQMSGSVSPFHNSLGMKRAKTRG 886
           E QDF+KKQQLRELAM+NGTLR+E S MSGSVSPFHNSLGMKRAKTRG
Sbjct: 253 ESQDFYKKQQLRELAMLNGTLREEGSPMSGSVSPFHNSLGMKRAKTRG 300


>ref|XP_002299073.1| predicted protein [Populus trichocarpa] gi|222846331|gb|EEE83878.1|
           predicted protein [Populus trichocarpa]
          Length = 302

 Score =  424 bits (1089), Expect = e-116
 Identities = 213/289 (73%), Positives = 241/289 (83%), Gaps = 2/289 (0%)
 Frame = +2

Query: 26  GRYMPYSPS--ATHSPHHQNLSAFRSTAAALVEQDNYLAELLAERQKISPFMPVLPISFR 199
           GR+M YSPS  A HSPH   L +  +++A +VEQ+ YL+ELLAER KISPF+PVLP ++R
Sbjct: 14  GRFMAYSPSPSAPHSPHISGLRSSAASSALVVEQEKYLSELLAERHKISPFLPVLPNTYR 73

Query: 200 LLNQEILRVTTLLGNASLLDQSGFEHASPLTSGGIFSNGGADIHGWASAFQSERLGLIQX 379
           LLNQEILRVTTLLGNAS+L QSG EHASPL SGGIFSNG AD +GWAS FQSE  G++Q 
Sbjct: 74  LLNQEILRVTTLLGNASVLGQSGLEHASPLASGGIFSNGAADANGWASRFQSEMSGILQP 133

Query: 380 XXXXXXXXXXXXXXXXXVKKTLRVDIPLDKYPTFNFVGRLLGPRGNSLKRVEANTECRVL 559
                            VK+T+RVDIP+DKYP +NFVGRLLGPRGNSLKRVEA+TECRVL
Sbjct: 134 SSAQNWLSSQGSSSGLIVKRTIRVDIPVDKYPNYNFVGRLLGPRGNSLKRVEASTECRVL 193

Query: 560 IRGHGSIKDPVREDMMRGKPGYEHLNEPLHILVEAELPVEIIDARLMQAREILEDLLKPV 739
           IRG GSIKDP REDMMRGKPGYEHLNEPLHILVE ELPVEI+DARLMQAREILEDLL+PV
Sbjct: 194 IRGRGSIKDPAREDMMRGKPGYEHLNEPLHILVEGELPVEIVDARLMQAREILEDLLRPV 253

Query: 740 DECQDFFKKQQLRELAMINGTLRDEASQMSGSVSPFHNSLGMKRAKTRG 886
           DE QD++KKQQLRELA++NGT R+E S MSGSVSPF+NSLGMKRAKTRG
Sbjct: 254 DESQDYYKKQQLRELALLNGTFREEGSPMSGSVSPFNNSLGMKRAKTRG 302


>ref|XP_003522828.1| PREDICTED: KH domain-containing protein At5g56140-like [Glycine
           max]
          Length = 291

 Score =  421 bits (1081), Expect = e-115
 Identities = 221/292 (75%), Positives = 237/292 (81%), Gaps = 2/292 (0%)
 Frame = +2

Query: 17  SSGGRYM--PYSPSATHSPHHQNLSAFRSTAAALVEQDNYLAELLAERQKISPFMPVLPI 190
           S  GRYM  P SPSA  SPH   LS  RST   L + D YLAELL ER K+SPFM VLP 
Sbjct: 5   SGAGRYMAFPPSPSAPPSPH---LSGLRSTP--LSDPDKYLAELLGERNKLSPFMAVLPH 59

Query: 191 SFRLLNQEILRVTTLLGNASLLDQSGFEHASPLTSGGIFSNGGADIHGWASAFQSERLGL 370
            FRL NQEILRVTTL+GNAS+L QSG EHASPL +GGIFSNGGAD++GWAS FQSER  L
Sbjct: 60  CFRLFNQEILRVTTLMGNASVLGQSGLEHASPLATGGIFSNGGADVNGWASRFQSERPSL 119

Query: 371 IQXXXXXXXXXXXXXXXXXXVKKTLRVDIPLDKYPTFNFVGRLLGPRGNSLKRVEANTEC 550
           +Q                  VKKT+RVDIP+D YP FNFVGRLLGPRGNSLKRVEA+TEC
Sbjct: 120 LQSSSTQNWLSPQGSSSGIIVKKTVRVDIPVDAYPNFNFVGRLLGPRGNSLKRVEASTEC 179

Query: 551 RVLIRGHGSIKDPVREDMMRGKPGYEHLNEPLHILVEAELPVEIIDARLMQAREILEDLL 730
           RVLIRG GSIKDP RE+MMRGKPGYEHLNEPLHILVEAELPVEI+DARLMQAREILEDLL
Sbjct: 180 RVLIRGRGSIKDPAREEMMRGKPGYEHLNEPLHILVEAELPVEIVDARLMQAREILEDLL 239

Query: 731 KPVDECQDFFKKQQLRELAMINGTLRDEASQMSGSVSPFHNSLGMKRAKTRG 886
           KPVDE QDF+KKQQLRELAM+NGTLR+E S MSGSVSPFHNSLGMKRAKTRG
Sbjct: 240 KPVDESQDFYKKQQLRELAMLNGTLREEGSPMSGSVSPFHNSLGMKRAKTRG 291


>ref|XP_002330577.1| predicted protein [Populus trichocarpa] gi|222872135|gb|EEF09266.1|
           predicted protein [Populus trichocarpa]
          Length = 301

 Score =  417 bits (1071), Expect = e-114
 Identities = 211/288 (73%), Positives = 238/288 (82%), Gaps = 2/288 (0%)
 Frame = +2

Query: 29  RYMPYSPS--ATHSPHHQNLSAFRSTAAALVEQDNYLAELLAERQKISPFMPVLPISFRL 202
           R+M YSPS  A HSPH   L +  +++A +VEQ+ YL+ELLAER KI PFMPVLP  +RL
Sbjct: 14  RFMAYSPSPSAPHSPHISGLRSSAASSALVVEQEKYLSELLAERHKIIPFMPVLPNIYRL 73

Query: 203 LNQEILRVTTLLGNASLLDQSGFEHASPLTSGGIFSNGGADIHGWASAFQSERLGLIQXX 382
           LNQEILRVTTLLGNAS+L QSG EHASPL+SGGIFSNG AD +GWAS FQSE  G++Q  
Sbjct: 74  LNQEILRVTTLLGNASVLGQSGLEHASPLSSGGIFSNGAADANGWASRFQSEMSGMLQPS 133

Query: 383 XXXXXXXXXXXXXXXXVKKTLRVDIPLDKYPTFNFVGRLLGPRGNSLKRVEANTECRVLI 562
                            K+T+RVDIP+DKYP +NFVGRLLGPRGNSLKRVEA+TECRVLI
Sbjct: 134 SAQNWLSSQGSSSGLIAKRTIRVDIPVDKYPNYNFVGRLLGPRGNSLKRVEASTECRVLI 193

Query: 563 RGHGSIKDPVREDMMRGKPGYEHLNEPLHILVEAELPVEIIDARLMQAREILEDLLKPVD 742
           RG GSIKDP +E+MMRGKPGYEHLNEPLHILVE ELPVEI+DARLMQA EILEDLLKPVD
Sbjct: 194 RGRGSIKDPAKEEMMRGKPGYEHLNEPLHILVEGELPVEIVDARLMQASEILEDLLKPVD 253

Query: 743 ECQDFFKKQQLRELAMINGTLRDEASQMSGSVSPFHNSLGMKRAKTRG 886
           E QD++KKQQLRELAM+NGTLR+E S MSGSVSPF+NSLGMKRAKTRG
Sbjct: 254 ESQDYYKKQQLRELAMLNGTLREEGSPMSGSVSPFNNSLGMKRAKTRG 301