BLASTX nr result
ID: Coptis21_contig00003890
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00003890 (1265 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002274648.1| PREDICTED: KH domain-containing protein At5g... 436 e-120 ref|XP_002532938.1| nucleic acid binding protein, putative [Rici... 433 e-119 ref|XP_002299073.1| predicted protein [Populus trichocarpa] gi|2... 424 e-116 ref|XP_003522828.1| PREDICTED: KH domain-containing protein At5g... 421 e-115 ref|XP_002330577.1| predicted protein [Populus trichocarpa] gi|2... 417 e-114 >ref|XP_002274648.1| PREDICTED: KH domain-containing protein At5g56140 isoform 1 [Vitis vinifera] gi|296089986|emb|CBI39805.3| unnamed protein product [Vitis vinifera] Length = 287 Score = 436 bits (1121), Expect = e-120 Identities = 219/289 (75%), Positives = 245/289 (84%) Frame = +2 Query: 20 SGGRYMPYSPSATHSPHHQNLSAFRSTAAALVEQDNYLAELLAERQKISPFMPVLPISFR 199 S GRYM YSPS + +PH +++ RS +ALVEQ+ YL+ELLAER K+SPFMPVLP S+R Sbjct: 2 SSGRYMAYSPSPSTAPHSPHIAGLRSATSALVEQEKYLSELLAERHKLSPFMPVLPHSYR 61 Query: 200 LLNQEILRVTTLLGNASLLDQSGFEHASPLTSGGIFSNGGADIHGWASAFQSERLGLIQX 379 LLNQEILRVTTLLGNAS+LDQSG EHASPL SGGIFSNGGA+++GWAS FQSE GL Sbjct: 62 LLNQEILRVTTLLGNASILDQSGLEHASPLASGGIFSNGGANVNGWASPFQSEMSGL--- 118 Query: 380 XXXXXXXXXXXXXXXXXVKKTLRVDIPLDKYPTFNFVGRLLGPRGNSLKRVEANTECRVL 559 VK+T+RVDIP++K+P++NFVGRLLGPRGNSLKR+EA TECRVL Sbjct: 119 SAAQNWLGSQGSSSGLIVKRTIRVDIPVEKFPSYNFVGRLLGPRGNSLKRMEATTECRVL 178 Query: 560 IRGHGSIKDPVREDMMRGKPGYEHLNEPLHILVEAELPVEIIDARLMQAREILEDLLKPV 739 IRG GSIKDP RE+MMRGKPGYEHLNEPLHILVEAELPVEI+DARLMQAREILEDLLKPV Sbjct: 179 IRGRGSIKDPAREEMMRGKPGYEHLNEPLHILVEAELPVEIVDARLMQAREILEDLLKPV 238 Query: 740 DECQDFFKKQQLRELAMINGTLRDEASQMSGSVSPFHNSLGMKRAKTRG 886 DE QDFFKKQQLRELAM+NGTLR+E S MSGSVSPFHNSLGMKRAKTRG Sbjct: 239 DESQDFFKKQQLRELAMLNGTLREEGSHMSGSVSPFHNSLGMKRAKTRG 287 >ref|XP_002532938.1| nucleic acid binding protein, putative [Ricinus communis] gi|223527289|gb|EEF29442.1| nucleic acid binding protein, putative [Ricinus communis] Length = 300 Score = 433 bits (1113), Expect = e-119 Identities = 217/288 (75%), Positives = 246/288 (85%) Frame = +2 Query: 23 GGRYMPYSPSATHSPHHQNLSAFRSTAAALVEQDNYLAELLAERQKISPFMPVLPISFRL 202 GGR+M YSPS + +PH +LS RS ++ALVEQ+ YL+ELLAER K+SPFMPVLP ++RL Sbjct: 14 GGRFMAYSPSPS-APHSPHLSGLRSASSALVEQEKYLSELLAERHKLSPFMPVLPHTYRL 72 Query: 203 LNQEILRVTTLLGNASLLDQSGFEHASPLTSGGIFSNGGADIHGWASAFQSERLGLIQXX 382 L+QEILRVTTLLGNAS+L QSG EHASPL SGG+FSNGGAD +GWAS FQSE GLIQ Sbjct: 73 LSQEILRVTTLLGNASVLGQSGLEHASPLASGGMFSNGGADANGWASRFQSEMSGLIQPS 132 Query: 383 XXXXXXXXXXXXXXXXVKKTLRVDIPLDKYPTFNFVGRLLGPRGNSLKRVEANTECRVLI 562 VK+T+RVDIP+++YP++NFVGRLLGPRGNSLKRVEA+TECRVLI Sbjct: 133 SAQNWLSSQGSSSGLIVKRTIRVDIPIERYPSYNFVGRLLGPRGNSLKRVEASTECRVLI 192 Query: 563 RGHGSIKDPVREDMMRGKPGYEHLNEPLHILVEAELPVEIIDARLMQAREILEDLLKPVD 742 RG GSIKDP RE+MMRGKPGYEHLNEPLHILVEAELPVEI+DAR+ QAREILEDLLKPVD Sbjct: 193 RGRGSIKDPAREEMMRGKPGYEHLNEPLHILVEAELPVEIVDARIAQAREILEDLLKPVD 252 Query: 743 ECQDFFKKQQLRELAMINGTLRDEASQMSGSVSPFHNSLGMKRAKTRG 886 E QDF+KKQQLRELAM+NGTLR+E S MSGSVSPFHNSLGMKRAKTRG Sbjct: 253 ESQDFYKKQQLRELAMLNGTLREEGSPMSGSVSPFHNSLGMKRAKTRG 300 >ref|XP_002299073.1| predicted protein [Populus trichocarpa] gi|222846331|gb|EEE83878.1| predicted protein [Populus trichocarpa] Length = 302 Score = 424 bits (1089), Expect = e-116 Identities = 213/289 (73%), Positives = 241/289 (83%), Gaps = 2/289 (0%) Frame = +2 Query: 26 GRYMPYSPS--ATHSPHHQNLSAFRSTAAALVEQDNYLAELLAERQKISPFMPVLPISFR 199 GR+M YSPS A HSPH L + +++A +VEQ+ YL+ELLAER KISPF+PVLP ++R Sbjct: 14 GRFMAYSPSPSAPHSPHISGLRSSAASSALVVEQEKYLSELLAERHKISPFLPVLPNTYR 73 Query: 200 LLNQEILRVTTLLGNASLLDQSGFEHASPLTSGGIFSNGGADIHGWASAFQSERLGLIQX 379 LLNQEILRVTTLLGNAS+L QSG EHASPL SGGIFSNG AD +GWAS FQSE G++Q Sbjct: 74 LLNQEILRVTTLLGNASVLGQSGLEHASPLASGGIFSNGAADANGWASRFQSEMSGILQP 133 Query: 380 XXXXXXXXXXXXXXXXXVKKTLRVDIPLDKYPTFNFVGRLLGPRGNSLKRVEANTECRVL 559 VK+T+RVDIP+DKYP +NFVGRLLGPRGNSLKRVEA+TECRVL Sbjct: 134 SSAQNWLSSQGSSSGLIVKRTIRVDIPVDKYPNYNFVGRLLGPRGNSLKRVEASTECRVL 193 Query: 560 IRGHGSIKDPVREDMMRGKPGYEHLNEPLHILVEAELPVEIIDARLMQAREILEDLLKPV 739 IRG GSIKDP REDMMRGKPGYEHLNEPLHILVE ELPVEI+DARLMQAREILEDLL+PV Sbjct: 194 IRGRGSIKDPAREDMMRGKPGYEHLNEPLHILVEGELPVEIVDARLMQAREILEDLLRPV 253 Query: 740 DECQDFFKKQQLRELAMINGTLRDEASQMSGSVSPFHNSLGMKRAKTRG 886 DE QD++KKQQLRELA++NGT R+E S MSGSVSPF+NSLGMKRAKTRG Sbjct: 254 DESQDYYKKQQLRELALLNGTFREEGSPMSGSVSPFNNSLGMKRAKTRG 302 >ref|XP_003522828.1| PREDICTED: KH domain-containing protein At5g56140-like [Glycine max] Length = 291 Score = 421 bits (1081), Expect = e-115 Identities = 221/292 (75%), Positives = 237/292 (81%), Gaps = 2/292 (0%) Frame = +2 Query: 17 SSGGRYM--PYSPSATHSPHHQNLSAFRSTAAALVEQDNYLAELLAERQKISPFMPVLPI 190 S GRYM P SPSA SPH LS RST L + D YLAELL ER K+SPFM VLP Sbjct: 5 SGAGRYMAFPPSPSAPPSPH---LSGLRSTP--LSDPDKYLAELLGERNKLSPFMAVLPH 59 Query: 191 SFRLLNQEILRVTTLLGNASLLDQSGFEHASPLTSGGIFSNGGADIHGWASAFQSERLGL 370 FRL NQEILRVTTL+GNAS+L QSG EHASPL +GGIFSNGGAD++GWAS FQSER L Sbjct: 60 CFRLFNQEILRVTTLMGNASVLGQSGLEHASPLATGGIFSNGGADVNGWASRFQSERPSL 119 Query: 371 IQXXXXXXXXXXXXXXXXXXVKKTLRVDIPLDKYPTFNFVGRLLGPRGNSLKRVEANTEC 550 +Q VKKT+RVDIP+D YP FNFVGRLLGPRGNSLKRVEA+TEC Sbjct: 120 LQSSSTQNWLSPQGSSSGIIVKKTVRVDIPVDAYPNFNFVGRLLGPRGNSLKRVEASTEC 179 Query: 551 RVLIRGHGSIKDPVREDMMRGKPGYEHLNEPLHILVEAELPVEIIDARLMQAREILEDLL 730 RVLIRG GSIKDP RE+MMRGKPGYEHLNEPLHILVEAELPVEI+DARLMQAREILEDLL Sbjct: 180 RVLIRGRGSIKDPAREEMMRGKPGYEHLNEPLHILVEAELPVEIVDARLMQAREILEDLL 239 Query: 731 KPVDECQDFFKKQQLRELAMINGTLRDEASQMSGSVSPFHNSLGMKRAKTRG 886 KPVDE QDF+KKQQLRELAM+NGTLR+E S MSGSVSPFHNSLGMKRAKTRG Sbjct: 240 KPVDESQDFYKKQQLRELAMLNGTLREEGSPMSGSVSPFHNSLGMKRAKTRG 291 >ref|XP_002330577.1| predicted protein [Populus trichocarpa] gi|222872135|gb|EEF09266.1| predicted protein [Populus trichocarpa] Length = 301 Score = 417 bits (1071), Expect = e-114 Identities = 211/288 (73%), Positives = 238/288 (82%), Gaps = 2/288 (0%) Frame = +2 Query: 29 RYMPYSPS--ATHSPHHQNLSAFRSTAAALVEQDNYLAELLAERQKISPFMPVLPISFRL 202 R+M YSPS A HSPH L + +++A +VEQ+ YL+ELLAER KI PFMPVLP +RL Sbjct: 14 RFMAYSPSPSAPHSPHISGLRSSAASSALVVEQEKYLSELLAERHKIIPFMPVLPNIYRL 73 Query: 203 LNQEILRVTTLLGNASLLDQSGFEHASPLTSGGIFSNGGADIHGWASAFQSERLGLIQXX 382 LNQEILRVTTLLGNAS+L QSG EHASPL+SGGIFSNG AD +GWAS FQSE G++Q Sbjct: 74 LNQEILRVTTLLGNASVLGQSGLEHASPLSSGGIFSNGAADANGWASRFQSEMSGMLQPS 133 Query: 383 XXXXXXXXXXXXXXXXVKKTLRVDIPLDKYPTFNFVGRLLGPRGNSLKRVEANTECRVLI 562 K+T+RVDIP+DKYP +NFVGRLLGPRGNSLKRVEA+TECRVLI Sbjct: 134 SAQNWLSSQGSSSGLIAKRTIRVDIPVDKYPNYNFVGRLLGPRGNSLKRVEASTECRVLI 193 Query: 563 RGHGSIKDPVREDMMRGKPGYEHLNEPLHILVEAELPVEIIDARLMQAREILEDLLKPVD 742 RG GSIKDP +E+MMRGKPGYEHLNEPLHILVE ELPVEI+DARLMQA EILEDLLKPVD Sbjct: 194 RGRGSIKDPAKEEMMRGKPGYEHLNEPLHILVEGELPVEIVDARLMQASEILEDLLKPVD 253 Query: 743 ECQDFFKKQQLRELAMINGTLRDEASQMSGSVSPFHNSLGMKRAKTRG 886 E QD++KKQQLRELAM+NGTLR+E S MSGSVSPF+NSLGMKRAKTRG Sbjct: 254 ESQDYYKKQQLRELAMLNGTLREEGSPMSGSVSPFNNSLGMKRAKTRG 301