BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00003888
         (1549 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276286.2| PREDICTED: katanin p60 ATPase-containing sub...   558   e-168
ref|XP_002519683.1| Katanin p60 ATPase-containing subunit, putat...   549   e-165
ref|XP_003531097.1| PREDICTED: katanin p60 ATPase-containing sub...   544   e-164
ref|XP_003524802.1| PREDICTED: katanin p60 ATPase-containing sub...   540   e-163
ref|XP_002305703.1| predicted protein [Populus trichocarpa] gi|2...   546   e-163

>ref|XP_002276286.2| PREDICTED: katanin p60 ATPase-containing subunit A-like 2 [Vitis
            vinifera]
          Length = 406

 Score =  558 bits (1439), Expect(2) = e-168
 Identities = 277/326 (84%), Positives = 298/326 (91%)
 Frame = +1

Query: 352  NGISSETTNGKPQKSLLPPFDSAETRALGESLCRDIIRGNPDVKWENIKGLETAKRLLKE 531
            NG+ S+  + KPQKSLLP F+SA+ RALGESL RDIIRG+PDVKW++IKGLE AKRLLKE
Sbjct: 81   NGVLSDRYDEKPQKSLLPSFESADMRALGESLSRDIIRGSPDVKWDSIKGLENAKRLLKE 140

Query: 532  AVVMPIKYPKYFTGLLSPWKGILLFGPPGTGKTMLAKAVATECNTTFFNISASSIVSKWR 711
            AVVMPIKYPKYFTGLLSPWKGILLFGPPGTGKTMLAKAVATEC TTFFNISASS+VSKWR
Sbjct: 141  AVVMPIKYPKYFTGLLSPWKGILLFGPPGTGKTMLAKAVATECKTTFFNISASSVVSKWR 200

Query: 712  GDSEKLVKVLFELARHHAPSTIFLDEIDAIISQRGEGRSEHEASRRLKTELLVQMDGLTK 891
            GDSEKLVKVLFELARHHAPSTIFLDEIDA+ISQRGEGRSEHEASRRLKTELLVQMDGLTK
Sbjct: 201  GDSEKLVKVLFELARHHAPSTIFLDEIDALISQRGEGRSEHEASRRLKTELLVQMDGLTK 260

Query: 892  TNDLVFVLAATNLPWELDAAMLRRLEKRILVPLPEPEARRAMFEELLPSIPGEEKLPYEL 1071
            T++LVFVLAATNLPWELDAAMLRRLEKRILVPLPEPEARRAMFEELLPS+PGEEKLPY+L
Sbjct: 261  TDELVFVLAATNLPWELDAAMLRRLEKRILVPLPEPEARRAMFEELLPSVPGEEKLPYDL 320

Query: 1072 LVERTEGYSGSDIRLVCKEAAMQPLRRVMXXXXXXXXXXXXXXXXKVGPIEHEDIETALR 1251
            +VERTEGYSGSDIRL+CKEAAMQPLRR+M                KVGPI+H+DIETAL+
Sbjct: 321  MVERTEGYSGSDIRLLCKEAAMQPLRRLMAHLEDKAEVVPEEELPKVGPIKHDDIETALK 380

Query: 1252 NTRPSAHLHAHRYDKFNADYGSHIVQ 1329
            NTRPSAHLH HRYDKFN DYGS I+Q
Sbjct: 381  NTRPSAHLHVHRYDKFNTDYGSQILQ 406



 Score = 62.0 bits (149), Expect(2) = e-168
 Identities = 28/48 (58%), Positives = 34/48 (70%)
 Frame = +3

Query: 105 MSDEPMPTRWSFQDFKMFYDAKFGRKKEAEQKENGHIGNVVVSNDHTN 248
           M+DEP  TRWSFQDFKMFYD KFGRKKE E+ +        VSN +++
Sbjct: 1   MADEPFLTRWSFQDFKMFYDVKFGRKKEPEKHDAAESSGKPVSNGNSS 48


>ref|XP_002519683.1| Katanin p60 ATPase-containing subunit, putative [Ricinus communis]
            gi|223541100|gb|EEF42656.1| Katanin p60 ATPase-containing
            subunit, putative [Ricinus communis]
          Length = 408

 Score =  549 bits (1414), Expect(2) = e-165
 Identities = 272/327 (83%), Positives = 293/327 (89%)
 Frame = +1

Query: 349  ANGISSETTNGKPQKSLLPPFDSAETRALGESLCRDIIRGNPDVKWENIKGLETAKRLLK 528
            +NG+     + +PQKSLLP FDSAETRAL E LCRDI+RGNPDVKWE+IKGLE AKRLLK
Sbjct: 82   SNGVLPNGIDDRPQKSLLPAFDSAETRALAEGLCRDIVRGNPDVKWESIKGLENAKRLLK 141

Query: 529  EAVVMPIKYPKYFTGLLSPWKGILLFGPPGTGKTMLAKAVATECNTTFFNISASSIVSKW 708
            EAVVMPIKYPKYFTGLLSPWKGILLFGPPGTGKTMLAKAVATEC TTFFNISASS+VSKW
Sbjct: 142  EAVVMPIKYPKYFTGLLSPWKGILLFGPPGTGKTMLAKAVATECKTTFFNISASSVVSKW 201

Query: 709  RGDSEKLVKVLFELARHHAPSTIFLDEIDAIISQRGEGRSEHEASRRLKTELLVQMDGLT 888
            RGDSEKL+KVLFELARHHAPSTIF+DEIDAIISQRGEGRSEHEASRRLKTELL+QMDGLT
Sbjct: 202  RGDSEKLIKVLFELARHHAPSTIFIDEIDAIISQRGEGRSEHEASRRLKTELLIQMDGLT 261

Query: 889  KTNDLVFVLAATNLPWELDAAMLRRLEKRILVPLPEPEARRAMFEELLPSIPGEEKLPYE 1068
            +T +LVFVLAATNLPWELDAAMLRRLEKRILVPLPEPEARRAM+EELLP  P E+KLPY+
Sbjct: 262  RTEELVFVLAATNLPWELDAAMLRRLEKRILVPLPEPEARRAMYEELLPPQPDEDKLPYD 321

Query: 1069 LLVERTEGYSGSDIRLVCKEAAMQPLRRVMXXXXXXXXXXXXXXXXKVGPIEHEDIETAL 1248
            LLVERTEG+SGSDIRL+CKEAAMQPLRR+M                KVGPI  EDIETAL
Sbjct: 322  LLVERTEGFSGSDIRLLCKEAAMQPLRRLMALLEDRQEVVPDDELPKVGPITPEDIETAL 381

Query: 1249 RNTRPSAHLHAHRYDKFNADYGSHIVQ 1329
            +NTRPSAHLHAHRY+KFNADYGS I+Q
Sbjct: 382  KNTRPSAHLHAHRYEKFNADYGSQILQ 408



 Score = 61.2 bits (147), Expect(2) = e-165
 Identities = 36/76 (47%), Positives = 45/76 (59%), Gaps = 16/76 (21%)
 Frame = +3

Query: 105 MSDEPMPTRWSFQDFKMFYDAKFGRKKEAEQKENGHIGNVV------------VSNDHTN 248
           M+DEP  TRWSFQDFK+FYDAKFGRKK +E  +NG  G  V             SN + +
Sbjct: 1   MADEPSVTRWSFQDFKLFYDAKFGRKKMSE-TQNGVAGPAVANGIGNSSTSNATSNGNGH 59

Query: 249 VTN----VVNEEFRNQ 284
           V N     + E++RNQ
Sbjct: 60  VKNTSDMAIYEQYRNQ 75


>ref|XP_003531097.1| PREDICTED: katanin p60 ATPase-containing subunit A-like 2-like
            [Glycine max]
          Length = 405

 Score =  544 bits (1402), Expect(2) = e-164
 Identities = 272/326 (83%), Positives = 290/326 (88%)
 Frame = +1

Query: 352  NGISSETTNGKPQKSLLPPFDSAETRALGESLCRDIIRGNPDVKWENIKGLETAKRLLKE 531
            NG     T+ +PQKSLLPPF+SAE RAL ESL RDIIRG+PDVKWE+IKGLE AKRLLKE
Sbjct: 80   NGFVPTLTDERPQKSLLPPFESAEMRALAESLSRDIIRGSPDVKWESIKGLENAKRLLKE 139

Query: 532  AVVMPIKYPKYFTGLLSPWKGILLFGPPGTGKTMLAKAVATECNTTFFNISASSIVSKWR 711
            AVVMPIKYPKYFTGLLSPWKGILLFGPPGTGKTMLAKAVATECNTTFFNISASS+VSKWR
Sbjct: 140  AVVMPIKYPKYFTGLLSPWKGILLFGPPGTGKTMLAKAVATECNTTFFNISASSVVSKWR 199

Query: 712  GDSEKLVKVLFELARHHAPSTIFLDEIDAIISQRGEGRSEHEASRRLKTELLVQMDGLTK 891
            GDSEKLVKVLFELARHHAPSTIFLDEIDAIISQRGE RSEHEASRRLKTELL+QMDGLTK
Sbjct: 200  GDSEKLVKVLFELARHHAPSTIFLDEIDAIISQRGEARSEHEASRRLKTELLIQMDGLTK 259

Query: 892  TNDLVFVLAATNLPWELDAAMLRRLEKRILVPLPEPEARRAMFEELLPSIPGEEKLPYEL 1071
            T++LVFVLAATNLPWELDAAMLRRLEKRILVPLPEP ARRAMFEELLP  PGEE +PY++
Sbjct: 260  TDELVFVLAATNLPWELDAAMLRRLEKRILVPLPEPVARRAMFEELLPQQPGEESIPYDI 319

Query: 1072 LVERTEGYSGSDIRLVCKEAAMQPLRRVMXXXXXXXXXXXXXXXXKVGPIEHEDIETALR 1251
            L ++TEGYSGSDIRL+CKE AMQPLRR+M                KVGPI  EDIETALR
Sbjct: 320  LEDKTEGYSGSDIRLLCKETAMQPLRRLMSQLEQNQDVVPEEELPKVGPIRSEDIETALR 379

Query: 1252 NTRPSAHLHAHRYDKFNADYGSHIVQ 1329
            NTRPSAHLHAH+YDKFNADYGS I+Q
Sbjct: 380  NTRPSAHLHAHKYDKFNADYGSQILQ 405



 Score = 63.2 bits (152), Expect(2) = e-164
 Identities = 35/72 (48%), Positives = 48/72 (66%), Gaps = 12/72 (16%)
 Frame = +3

Query: 105 MSDEPMPTRWSFQDFKMFYDAKFGRKKEAEQKE--------NGHIGNV---VVSNDHTNV 251
           M+D+PMPTRWSFQDFK+ YDAKFGRKK AE  +        NG+  +V   +VSN +   
Sbjct: 1   MADDPMPTRWSFQDFKLCYDAKFGRKKVAENGDDAAGKAVSNGNGNSVTVAIVSNGNKRA 60

Query: 252 TNV-VNEEFRNQ 284
           + + V E+FR++
Sbjct: 61  SEMAVYEQFRSE 72


>ref|XP_003524802.1| PREDICTED: katanin p60 ATPase-containing subunit A-like 2-like
            [Glycine max]
          Length = 403

 Score =  540 bits (1390), Expect(2) = e-163
 Identities = 270/326 (82%), Positives = 289/326 (88%)
 Frame = +1

Query: 352  NGISSETTNGKPQKSLLPPFDSAETRALGESLCRDIIRGNPDVKWENIKGLETAKRLLKE 531
            NG      + +PQKSLLPPF+SAE RAL ESL RDIIRG+PDVKWE+IKGLE AKRLLKE
Sbjct: 78   NGFVPTIVDERPQKSLLPPFESAEMRALAESLSRDIIRGSPDVKWESIKGLENAKRLLKE 137

Query: 532  AVVMPIKYPKYFTGLLSPWKGILLFGPPGTGKTMLAKAVATECNTTFFNISASSIVSKWR 711
            AVVMPIKYPKYFTGLLSPWKGILLFGPPGTGKTMLAKAVATEC TTFFNISASS+VSKWR
Sbjct: 138  AVVMPIKYPKYFTGLLSPWKGILLFGPPGTGKTMLAKAVATECKTTFFNISASSVVSKWR 197

Query: 712  GDSEKLVKVLFELARHHAPSTIFLDEIDAIISQRGEGRSEHEASRRLKTELLVQMDGLTK 891
            GDSEKLVKVLFELARHHAPSTIFLDEIDAIISQRGE RSEHEASRRLKTELL+QMDGLTK
Sbjct: 198  GDSEKLVKVLFELARHHAPSTIFLDEIDAIISQRGEARSEHEASRRLKTELLIQMDGLTK 257

Query: 892  TNDLVFVLAATNLPWELDAAMLRRLEKRILVPLPEPEARRAMFEELLPSIPGEEKLPYEL 1071
            T++LVFVLAATNLPWELDAAMLRRLEKRILVPLPEP ARRAMFEELLP  P EE +PY++
Sbjct: 258  TDELVFVLAATNLPWELDAAMLRRLEKRILVPLPEPVARRAMFEELLPQQPDEEPIPYDI 317

Query: 1072 LVERTEGYSGSDIRLVCKEAAMQPLRRVMXXXXXXXXXXXXXXXXKVGPIEHEDIETALR 1251
            LV++TEGYSGSDIRL+CKE AMQPLRR+M                KVGPI+ EDIETALR
Sbjct: 318  LVDKTEGYSGSDIRLLCKETAMQPLRRLMSQLEQSQDVVPEEELPKVGPIKSEDIETALR 377

Query: 1252 NTRPSAHLHAHRYDKFNADYGSHIVQ 1329
            NTRPSAHLHAH+YDKFNADYGS I+Q
Sbjct: 378  NTRPSAHLHAHKYDKFNADYGSQILQ 403



 Score = 64.7 bits (156), Expect(2) = e-163
 Identities = 35/70 (50%), Positives = 47/70 (67%), Gaps = 10/70 (14%)
 Frame = +3

Query: 105 MSDEPMPTRWSFQDFKMFYDAKFGRKKEAEQKE--------NGHIGNV-VVSNDHTNVTN 257
           M+D+PMPTRWSFQDFK++YDAKFGRKK AE  +        NG+   V +VSN +   + 
Sbjct: 1   MADDPMPTRWSFQDFKLYYDAKFGRKKVAENGDTATDKAVSNGNSVTVTIVSNGNKRASE 60

Query: 258 V-VNEEFRNQ 284
           + V E+FR +
Sbjct: 61  MAVYEQFRGE 70


>ref|XP_002305703.1| predicted protein [Populus trichocarpa] gi|222848667|gb|EEE86214.1|
            predicted protein [Populus trichocarpa]
          Length = 384

 Score =  546 bits (1408), Expect(2) = e-163
 Identities = 275/323 (85%), Positives = 291/323 (90%)
 Frame = +1

Query: 361  SSETTNGKPQKSLLPPFDSAETRALGESLCRDIIRGNPDVKWENIKGLETAKRLLKEAVV 540
            SS+    + +KSLLP FDSAETRAL ESLCRDIIRG+PDVKWE+IKGLE AKRLLKEAVV
Sbjct: 62   SSDMAIYEQKKSLLPAFDSAETRALAESLCRDIIRGSPDVKWESIKGLENAKRLLKEAVV 121

Query: 541  MPIKYPKYFTGLLSPWKGILLFGPPGTGKTMLAKAVATECNTTFFNISASSIVSKWRGDS 720
            MPIKYPKYFTGLLSPWKGILLFGPPGTGKTMLAKAVATEC TTFFNISASS+VSKWRGDS
Sbjct: 122  MPIKYPKYFTGLLSPWKGILLFGPPGTGKTMLAKAVATECKTTFFNISASSVVSKWRGDS 181

Query: 721  EKLVKVLFELARHHAPSTIFLDEIDAIISQRGEGRSEHEASRRLKTELLVQMDGLTKTND 900
            EKL+KVLFELARHHAPSTIFLDEIDAIISQRGE RSEHEASRRLKTELL+QMDGLT+TN+
Sbjct: 182  EKLIKVLFELARHHAPSTIFLDEIDAIISQRGEARSEHEASRRLKTELLIQMDGLTRTNE 241

Query: 901  LVFVLAATNLPWELDAAMLRRLEKRILVPLPEPEARRAMFEELLPSIPGEEKLPYELLVE 1080
            LVFVLAATNLPWELDAAMLRRLEKRILVPLPEPEAR AMFEELLPS P EEKLPY+LLVE
Sbjct: 242  LVFVLAATNLPWELDAAMLRRLEKRILVPLPEPEARAAMFEELLPSQPDEEKLPYDLLVE 301

Query: 1081 RTEGYSGSDIRLVCKEAAMQPLRRVMXXXXXXXXXXXXXXXXKVGPIEHEDIETALRNTR 1260
            RTEG+SGSDIRL+CKEAAMQPLRR+M                KVGPI  EDIETAL+NTR
Sbjct: 302  RTEGFSGSDIRLLCKEAAMQPLRRIMTLLEDTEEVVPEDELPKVGPIRPEDIETALKNTR 361

Query: 1261 PSAHLHAHRYDKFNADYGSHIVQ 1329
            PSAHLHAHRYDKFNADYGS I+Q
Sbjct: 362  PSAHLHAHRYDKFNADYGSQILQ 384



 Score = 57.0 bits (136), Expect(2) = e-163
 Identities = 31/62 (50%), Positives = 37/62 (59%), Gaps = 11/62 (17%)
 Frame = +3

Query: 105 MSDEPMPTRWSFQDFKMFYDAKFGRKKEA-----------EQKENGHIGNVVVSNDHTNV 251
           M+DEP  TRWSFQDFK FYD KFGRKK A           + ++NG    VV SN + +V
Sbjct: 1   MADEPSVTRWSFQDFKTFYDGKFGRKKAAAAAAAEAEAASDSQQNGQT-TVVASNGNGHV 59

Query: 252 TN 257
            N
Sbjct: 60  NN 61